Protein–RNA interactions for Protein: Q6ZMZ3

SYNE3, Nesprin-3, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3Q6ZMZ3 C1DP4-201ENST00000455429 424 ntBASIC3.74□□□□□ -1.81
SYNE3Q6ZMZ3 RPS27P29-201ENST00000463110 252 ntBASIC3.74□□□□□ -1.81
SYNE3Q6ZMZ3 RN7SL807P-201ENST00000470923 297 ntBASIC3.74□□□□□ -1.81
SYNE3Q6ZMZ3 RPL7P5-201ENST00000471472 736 ntBASIC3.74□□□□□ -1.81
SYNE3Q6ZMZ3 HSPE1P6-201ENST00000479457 291 ntBASIC3.74□□□□□ -1.81
SYNE3Q6ZMZ3 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.74□□□□□ -1.81
SYNE3Q6ZMZ3 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.74□□□□□ -1.81
SYNE3Q6ZMZ3 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC3.74□□□□□ -1.81
SYNE3Q6ZMZ3 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.74□□□□□ -1.81
SYNE3Q6ZMZ3 AC090572.1-201ENST00000519251 160 ntBASIC3.74□□□□□ -1.81
SYNE3Q6ZMZ3 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
SYNE3Q6ZMZ3 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC3.74□□□□□ -1.81
SYNE3Q6ZMZ3 AC005951.1-201ENST00000576706 485 ntBASIC3.74□□□□□ -1.81
SYNE3Q6ZMZ3 MIR3921-201ENST00000577308 85 ntBASIC3.74□□□□□ -1.81
SYNE3Q6ZMZ3 MIR5680-201ENST00000577577 84 ntBASIC3.74□□□□□ -1.81
SYNE3Q6ZMZ3 MIR2682-201ENST00000580305 110 ntBASIC3.74□□□□□ -1.81
SYNE3Q6ZMZ3 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.74□□□□□ -1.81
SYNE3Q6ZMZ3 BNIP3P33-201ENST00000598912 569 ntBASIC3.74□□□□□ -1.81
SYNE3Q6ZMZ3 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC3.74□□□□□ -1.81
SYNE3Q6ZMZ3 SRGNP1-201ENST00000603392 451 ntBASIC3.74□□□□□ -1.81
SYNE3Q6ZMZ3 AC006023.2-201ENST00000609916 167 ntBASIC3.74□□□□□ -1.81
SYNE3Q6ZMZ3 uc_338.25-201ENST00000613756 156 ntBASIC3.74□□□□□ -1.81
SYNE3Q6ZMZ3 AL136313.1-201ENST00000624804 202 ntBASIC3.74□□□□□ -1.81
SYNE3Q6ZMZ3 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
SYNE3Q6ZMZ3 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
SYNE3Q6ZMZ3 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.74□□□□□ -1.81
SYNE3Q6ZMZ3 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.74□□□□□ -1.81
SYNE3Q6ZMZ3 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
SYNE3Q6ZMZ3 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
SYNE3Q6ZMZ3 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.73□□□□□ -1.81
SYNE3Q6ZMZ3 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
SYNE3Q6ZMZ3 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC3.73□□□□□ -1.81
SYNE3Q6ZMZ3 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.73□□□□□ -1.81
SYNE3Q6ZMZ3 SNORA20.2-201ENST00000383922 131 ntBASIC3.73□□□□□ -1.81
SYNE3Q6ZMZ3 Y_RNA.516-201ENST00000384541 124 ntBASIC3.73□□□□□ -1.81
SYNE3Q6ZMZ3 RNU6-278P-201ENST00000390945 109 ntBASIC3.73□□□□□ -1.81
SYNE3Q6ZMZ3 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
SYNE3Q6ZMZ3 RNU2-71P-201ENST00000411395 189 ntBASIC3.73□□□□□ -1.81
SYNE3Q6ZMZ3 AC127391.1-201ENST00000411737 98 ntBASIC3.73□□□□□ -1.81
SYNE3Q6ZMZ3 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC3.73□□□□□ -1.81
SYNE3Q6ZMZ3 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
SYNE3Q6ZMZ3 BX295541.1-201ENST00000417774 250 ntBASIC3.73□□□□□ -1.81
SYNE3Q6ZMZ3 AL353678.1-201ENST00000422735 741 ntBASIC3.73□□□□□ -1.81
SYNE3Q6ZMZ3 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.73□□□□□ -1.81
SYNE3Q6ZMZ3 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC3.73□□□□□ -1.81
SYNE3Q6ZMZ3 AC007283.2-201ENST00000424739 197 ntBASIC3.73□□□□□ -1.81
SYNE3Q6ZMZ3 TRIM60P10Y-201ENST00000425589 751 ntBASIC3.73□□□□□ -1.81
SYNE3Q6ZMZ3 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.73□□□□□ -1.81
SYNE3Q6ZMZ3 DPPA2P1-201ENST00000428060 556 ntBASIC3.73□□□□□ -1.81
SYNE3Q6ZMZ3 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC3.73□□□□□ -1.81
SYNE3Q6ZMZ3 MTCO2P11-201ENST00000431069 680 ntBASIC3.73□□□□□ -1.81
SYNE3Q6ZMZ3 TRIM60P8Y-201ENST00000436338 762 ntBASIC3.73□□□□□ -1.81
SYNE3Q6ZMZ3 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC3.73□□□□□ -1.81
SYNE3Q6ZMZ3 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC3.73□□□□□ -1.81
SYNE3Q6ZMZ3 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC3.73□□□□□ -1.81
SYNE3Q6ZMZ3 AC109925.1-201ENST00000478069 331 ntBASIC3.73□□□□□ -1.81
SYNE3Q6ZMZ3 AC006483.1-201ENST00000487308 313 ntBASIC3.73□□□□□ -1.81
SYNE3Q6ZMZ3 AC092185.1-201ENST00000491371 97 ntBASIC3.73□□□□□ -1.81
SYNE3Q6ZMZ3 VN1R104P-201ENST00000505115 1009 ntBASIC3.73□□□□□ -1.81
SYNE3Q6ZMZ3 AC105914.1-201ENST00000511798 226 ntBASIC3.73□□□□□ -1.81
SYNE3Q6ZMZ3 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC3.73□□□□□ -1.81
SYNE3Q6ZMZ3 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.73□□□□□ -1.81
SYNE3Q6ZMZ3 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
SYNE3Q6ZMZ3 AC123904.3-201ENST00000547218 814 ntBASIC3.73□□□□□ -1.81
SYNE3Q6ZMZ3 AC087883.1-201ENST00000551882 391 ntBASIC3.73□□□□□ -1.81
SYNE3Q6ZMZ3 AC245505.1-201ENST00000556398 224 ntBASIC3.73□□□□□ -1.81
SYNE3Q6ZMZ3 RPL21P12-201ENST00000559810 515 ntBASIC3.73□□□□□ -1.81
SYNE3Q6ZMZ3 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC3.73□□□□□ -1.81
SYNE3Q6ZMZ3 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.73□□□□□ -1.81
SYNE3Q6ZMZ3 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC3.73□□□□□ -1.81
SYNE3Q6ZMZ3 AP001029.3-201ENST00000588063 596 ntBASIC3.73□□□□□ -1.81
SYNE3Q6ZMZ3 AP003465.2-201ENST00000602571 373 ntBASIC3.73□□□□□ -1.81
SYNE3Q6ZMZ3 AL133173.2-201ENST00000614270 90 ntBASIC3.73□□□□□ -1.81
SYNE3Q6ZMZ3 AC006338.1-201ENST00000618453 749 ntBASIC3.73□□□□□ -1.81
SYNE3Q6ZMZ3 AC073534.2-201ENST00000620377 381 ntBASIC3.73□□□□□ -1.81
SYNE3Q6ZMZ3 AC138649.3-201ENST00000622154 254 ntBASIC3.73□□□□□ -1.81
SYNE3Q6ZMZ3 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.73□□□□□ -1.81
SYNE3Q6ZMZ3 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
SYNE3Q6ZMZ3 MTND5P1-201ENST00000445440 1375 ntBASIC3.73□□□□□ -1.81
SYNE3Q6ZMZ3 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
SYNE3Q6ZMZ3 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
SYNE3Q6ZMZ3 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
SYNE3Q6ZMZ3 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
SYNE3Q6ZMZ3 GSTA9P-201ENST00000406231 611 ntBASIC3.72□□□□□ -1.81
SYNE3Q6ZMZ3 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.72□□□□□ -1.81
SYNE3Q6ZMZ3 ELOCP4-201ENST00000420090 333 ntBASIC3.72□□□□□ -1.81
SYNE3Q6ZMZ3 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC3.72□□□□□ -1.81
SYNE3Q6ZMZ3 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC3.72□□□□□ -1.81
SYNE3Q6ZMZ3 USP12PX-201ENST00000432383 1057 ntBASIC3.72□□□□□ -1.81
SYNE3Q6ZMZ3 AC093392.2-201ENST00000450682 337 ntBASIC3.72□□□□□ -1.81
SYNE3Q6ZMZ3 SNORD97-201ENST00000459187 142 ntBASIC3.72□□□□□ -1.81
SYNE3Q6ZMZ3 RPS3AP17-201ENST00000472594 777 ntBASIC3.72□□□□□ -1.81
SYNE3Q6ZMZ3 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC3.72□□□□□ -1.81
SYNE3Q6ZMZ3 RPL9P33-201ENST00000484311 566 ntBASIC3.72□□□□□ -1.81
SYNE3Q6ZMZ3 AC107401.1-201ENST00000503426 685 ntBASIC3.72□□□□□ -1.81
SYNE3Q6ZMZ3 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.72□□□□□ -1.81
SYNE3Q6ZMZ3 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.72□□□□□ -1.81
SYNE3Q6ZMZ3 RNU1-143P-201ENST00000516296 146 ntBASIC3.72□□□□□ -1.81
SYNE3Q6ZMZ3 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.72□□□□□ -1.81
SYNE3Q6ZMZ3 MGST1-215ENST00000540056 546 ntTSL 3 BASIC3.72□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms