Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
CLRN1P58418 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CLRN1P58418 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.79□□□□□ -1.8
CLRN1P58418 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC3.79□□□□□ -1.8
CLRN1P58418 AC139713.2-214ENST00000642059 1811 ntBASIC3.79□□□□□ -1.8
CLRN1P58418 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
CLRN1P58418 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
CLRN1P58418 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC3.79□□□□□ -1.8
CLRN1P58418 MFSD8-216ENST00000641147 4009 ntBASIC3.79□□□□□ -1.8
CLRN1P58418 Y_RNA.197-201ENST00000364004 102 ntBASIC3.79□□□□□ -1.8
CLRN1P58418 Y_RNA.202-201ENST00000364083 110 ntBASIC3.79□□□□□ -1.8
CLRN1P58418 RNU6-266P-201ENST00000364225 107 ntBASIC3.79□□□□□ -1.8
CLRN1P58418 RNU6-512P-201ENST00000364438 103 ntBASIC3.79□□□□□ -1.8
CLRN1P58418 RNU6-1279P-201ENST00000383917 103 ntBASIC3.79□□□□□ -1.8
CLRN1P58418 Y_RNA.395-201ENST00000383945 109 ntBASIC3.79□□□□□ -1.8
CLRN1P58418 MIR578-201ENST00000384828 96 ntBASIC3.79□□□□□ -1.8
CLRN1P58418 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
CLRN1P58418 AL391417.1-201ENST00000404100 426 ntBASIC3.79□□□□□ -1.8
CLRN1P58418 RNA5SP36-201ENST00000410197 133 ntBASIC3.79□□□□□ -1.8
CLRN1P58418 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.79□□□□□ -1.8
CLRN1P58418 AC063979.1-201ENST00000415539 377 ntBASIC3.79□□□□□ -1.8
CLRN1P58418 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC3.79□□□□□ -1.8
CLRN1P58418 EIF4EP1-201ENST00000422311 642 ntBASIC3.79□□□□□ -1.8
CLRN1P58418 RPL31P12-201ENST00000422587 358 ntBASIC3.79□□□□□ -1.8
CLRN1P58418 AC245028.1-201ENST00000423259 256 ntBASIC3.79□□□□□ -1.8
CLRN1P58418 AC091390.3-201ENST00000426478 338 ntBASIC3.79□□□□□ -1.8
CLRN1P58418 DNAJC19P7-201ENST00000428811 344 ntBASIC3.79□□□□□ -1.8
CLRN1P58418 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC3.79□□□□□ -1.8
CLRN1P58418 AC073063.1-201ENST00000434352 607 ntBASIC3.79□□□□□ -1.8
CLRN1P58418 HLA-N-201ENST00000437516 135 ntBASIC3.79□□□□□ -1.8
CLRN1P58418 AL360271.2-201ENST00000447710 161 ntBASIC3.79□□□□□ -1.8
CLRN1P58418 HMGN2P21-201ENST00000447764 270 ntBASIC3.79□□□□□ -1.8
CLRN1P58418 RPL23AP31-201ENST00000456160 467 ntBASIC3.79□□□□□ -1.8
CLRN1P58418 ELOCP24-201ENST00000456370 334 ntBASIC3.79□□□□□ -1.8
CLRN1P58418 AC087588.1-201ENST00000462203 316 ntBASIC3.79□□□□□ -1.8
CLRN1P58418 AC130509.1-201ENST00000464158 433 ntBASIC3.79□□□□□ -1.8
CLRN1P58418 CREM-226ENST00000469949 721 ntTSL 3 BASIC3.79□□□□□ -1.8
CLRN1P58418 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.79□□□□□ -1.8
CLRN1P58418 AL163540.1-201ENST00000485382 386 ntBASIC3.79□□□□□ -1.8
CLRN1P58418 RPS15AP34-201ENST00000487776 387 ntBASIC3.79□□□□□ -1.8
CLRN1P58418 AC026979.1-201ENST00000492525 396 ntBASIC3.79□□□□□ -1.8
CLRN1P58418 AC104164.2-201ENST00000496953 495 ntBASIC3.79□□□□□ -1.8
CLRN1P58418 SUMO2P6-201ENST00000505273 288 ntBASIC3.79□□□□□ -1.8
CLRN1P58418 MTCYBP40-201ENST00000509390 1135 ntBASIC3.79□□□□□ -1.8
CLRN1P58418 APOOP4-201ENST00000513530 597 ntBASIC3.79□□□□□ -1.8
CLRN1P58418 RNU6-1213P-201ENST00000517075 94 ntBASIC3.79□□□□□ -1.8
CLRN1P58418 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.79□□□□□ -1.8
CLRN1P58418 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC3.79□□□□□ -1.8
CLRN1P58418 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CLRN1P58418 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.79□□□□□ -1.8
CLRN1P58418 AC025423.5-201ENST00000550230 219 ntBASIC3.79□□□□□ -1.8
CLRN1P58418 MED28P6-201ENST00000558776 231 ntBASIC3.79□□□□□ -1.8
CLRN1P58418 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.79□□□□□ -1.8
CLRN1P58418 MIR4700-201ENST00000578311 74 ntBASIC3.79□□□□□ -1.8
CLRN1P58418 MIR4330-201ENST00000579077 105 ntBASIC3.79□□□□□ -1.8
CLRN1P58418 AC002545.1-201ENST00000592511 181 ntBASIC3.79□□□□□ -1.8
CLRN1P58418 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.79□□□□□ -1.8
CLRN1P58418 ATP5A1P2-202ENST00000616464 443 ntBASIC3.79□□□□□ -1.8
CLRN1P58418 Z99571.1-201ENST00000636677 394 ntBASIC3.79□□□□□ -1.8
CLRN1P58418 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
CLRN1P58418 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
CLRN1P58418 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.79□□□□□ -1.8
CLRN1P58418 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC3.79□□□□□ -1.8
CLRN1P58418 AC007823.1-201ENST00000569932 1566 ntBASIC3.79□□□□□ -1.8
CLRN1P58418 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC3.79□□□□□ -1.8
CLRN1P58418 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
CLRN1P58418 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CLRN1P58418 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC3.79□□□□□ -1.8
CLRN1P58418 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
CLRN1P58418 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.78□□□□□ -1.8
CLRN1P58418 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CLRN1P58418 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
CLRN1P58418 AL158163.1-201ENST00000603915 1649 ntBASIC3.78□□□□□ -1.8
CLRN1P58418 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CLRN1P58418 SNORA63C-201ENST00000364578 129 ntBASIC3.78□□□□□ -1.8
CLRN1P58418 RNU6-738P-201ENST00000384531 106 ntBASIC3.78□□□□□ -1.8
CLRN1P58418 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CLRN1P58418 AC011933.1-201ENST00000413334 321 ntBASIC3.78□□□□□ -1.8
CLRN1P58418 RPL26P29-201ENST00000415623 438 ntBASIC3.78□□□□□ -1.8
CLRN1P58418 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC3.78□□□□□ -1.8
CLRN1P58418 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC3.78□□□□□ -1.8
CLRN1P58418 AL592045.1-201ENST00000429867 352 ntBASIC3.78□□□□□ -1.8
CLRN1P58418 AC068287.1-201ENST00000430283 295 ntBASIC3.78□□□□□ -1.8
CLRN1P58418 RPS29P17-201ENST00000430795 166 ntBASIC3.78□□□□□ -1.8
CLRN1P58418 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC3.78□□□□□ -1.8
CLRN1P58418 HSPD1P21-201ENST00000436541 245 ntBASIC3.78□□□□□ -1.8
CLRN1P58418 RPL23AP46-201ENST00000438548 490 ntBASIC3.78□□□□□ -1.8
CLRN1P58418 TXNP1-201ENST00000441872 371 ntBASIC3.78□□□□□ -1.8
CLRN1P58418 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.78□□□□□ -1.8
CLRN1P58418 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC3.78□□□□□ -1.8
CLRN1P58418 AC133473.1-201ENST00000455173 299 ntBASIC3.78□□□□□ -1.8
CLRN1P58418 RPL7P5-201ENST00000471472 736 ntBASIC3.78□□□□□ -1.8
CLRN1P58418 AL592156.1-201ENST00000508758 304 ntBASIC3.78□□□□□ -1.8
CLRN1P58418 MTND3P25-201ENST00000509243 135 ntBASIC3.78□□□□□ -1.8
CLRN1P58418 AC002456.2-201ENST00000509356 380 ntBASIC3.78□□□□□ -1.8
CLRN1P58418 AC093840.1-201ENST00000511599 336 ntBASIC3.78□□□□□ -1.8
CLRN1P58418 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC3.78□□□□□ -1.8
CLRN1P58418 TRAPPC2P2-201ENST00000517589 409 ntBASIC3.78□□□□□ -1.8
CLRN1P58418 AC087854.1-201ENST00000519706 414 ntBASIC3.78□□□□□ -1.8
CLRN1P58418 IFITM8P-201ENST00000522529 394 ntBASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 121.1 ms