Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 AC067747.1-201ENST00000608026 250 ntBASIC2.24□□□□□ -2.05
VSX2P58304 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC2.24□□□□□ -2.05
VSX2P58304 AC245297.2-201ENST00000610119 565 ntBASIC2.24□□□□□ -2.05
VSX2P58304 AC093838.1-201ENST00000613014 469 ntBASIC2.24□□□□□ -2.05
VSX2P58304 AC016717.2-201ENST00000609089 5141 ntBASIC2.24□□□□□ -2.05
VSX2P58304 AL138713.1-201ENST00000624026 2130 ntBASIC2.24□□□□□ -2.05
VSX2P58304 AC006020.1-201ENST00000420179 1854 ntBASIC2.24□□□□□ -2.05
VSX2P58304 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
VSX2P58304 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
VSX2P58304 RNU1-51P-201ENST00000365345 176 ntBASIC2.23□□□□□ -2.05
VSX2P58304 U3.20-201ENST00000390909 217 ntBASIC2.23□□□□□ -2.05
VSX2P58304 RNU6-754P-201ENST00000391166 107 ntBASIC2.23□□□□□ -2.05
VSX2P58304 RNU6-516P-201ENST00000411381 104 ntBASIC2.23□□□□□ -2.05
VSX2P58304 MTCO2P23-201ENST00000425216 680 ntBASIC2.23□□□□□ -2.05
VSX2P58304 AL445669.1-201ENST00000426743 755 ntBASIC2.23□□□□□ -2.05
VSX2P58304 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC2.23□□□□□ -2.05
VSX2P58304 AC007919.1-201ENST00000429380 217 ntBASIC2.23□□□□□ -2.05
VSX2P58304 AL049734.2-201ENST00000441066 616 ntBASIC2.23□□□□□ -2.05
VSX2P58304 PIGFP3-201ENST00000441918 722 ntBASIC2.23□□□□□ -2.05
VSX2P58304 BMI1P1-201ENST00000445879 941 ntBASIC2.23□□□□□ -2.05
VSX2P58304 MTCO1P27-201ENST00000448269 226 ntBASIC2.23□□□□□ -2.05
VSX2P58304 AP1S2P1-201ENST00000457344 379 ntBASIC2.23□□□□□ -2.05
VSX2P58304 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC2.23□□□□□ -2.05
VSX2P58304 RPL23AP70-201ENST00000483361 460 ntBASIC2.23□□□□□ -2.05
VSX2P58304 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC2.23□□□□□ -2.05
VSX2P58304 HMGB3P3-201ENST00000510526 400 ntBASIC2.23□□□□□ -2.05
VSX2P58304 AC109445.1-201ENST00000512356 383 ntBASIC2.23□□□□□ -2.05
VSX2P58304 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.23□□□□□ -2.05
VSX2P58304 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC2.23□□□□□ -2.05
VSX2P58304 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC2.23□□□□□ -2.05
VSX2P58304 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC2.23□□□□□ -2.05
VSX2P58304 AC025281.1-201ENST00000567026 265 ntBASIC2.23□□□□□ -2.05
VSX2P58304 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC2.23□□□□□ -2.05
VSX2P58304 AC103810.1-201ENST00000579873 453 ntBASIC2.23□□□□□ -2.05
VSX2P58304 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.23□□□□□ -2.05
VSX2P58304 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC2.23□□□□□ -2.05
VSX2P58304 AC090186.1-201ENST00000605991 572 ntBASIC2.23□□□□□ -2.05
VSX2P58304 MIR6895-201ENST00000613497 78 ntBASIC2.23□□□□□ -2.05
VSX2P58304 UCA1.1-201ENST00000620952 75 ntBASIC2.23□□□□□ -2.05
VSX2P58304 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.23□□□□□ -2.05
VSX2P58304 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.23□□□□□ -2.05
VSX2P58304 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
VSX2P58304 MIR1261-201ENST00000408659 82 ntBASIC2.22□□□□□ -2.05
VSX2P58304 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC2.22□□□□□ -2.05
VSX2P58304 AC107081.1-201ENST00000414975 361 ntBASIC2.22□□□□□ -2.05
VSX2P58304 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC2.22□□□□□ -2.05
VSX2P58304 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.22□□□□□ -2.05
VSX2P58304 RPL7L1P10-201ENST00000427790 463 ntBASIC2.22□□□□□ -2.05
VSX2P58304 GTF2IP20-201ENST00000431663 360 ntBASIC2.22□□□□□ -2.05
VSX2P58304 RPS15AP28-201ENST00000435088 386 ntBASIC2.22□□□□□ -2.05
VSX2P58304 MTATP6P30-201ENST00000443540 664 ntBASIC2.22□□□□□ -2.05
VSX2P58304 RPL12P25-201ENST00000455592 494 ntBASIC2.22□□□□□ -2.05
VSX2P58304 RPL31P41-201ENST00000477967 372 ntBASIC2.22□□□□□ -2.05
VSX2P58304 AHI1-208ENST00000488690 712 ntTSL 5 BASIC2.22□□□□□ -2.05
VSX2P58304 SUMO2P6-201ENST00000505273 288 ntBASIC2.22□□□□□ -2.05
VSX2P58304 AC104090.1-201ENST00000506341 1171 ntBASIC2.22□□□□□ -2.05
VSX2P58304 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC2.22□□□□□ -2.05
VSX2P58304 AC008549.1-201ENST00000512900 643 ntBASIC2.22□□□□□ -2.05
VSX2P58304 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.22□□□□□ -2.05
VSX2P58304 RNU1-41P-201ENST00000516161 162 ntBASIC2.22□□□□□ -2.05
VSX2P58304 RNU1-48P-201ENST00000516400 162 ntBASIC2.22□□□□□ -2.05
VSX2P58304 SUB1P1-201ENST00000524415 382 ntBASIC2.22□□□□□ -2.05
VSX2P58304 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC2.22□□□□□ -2.05
VSX2P58304 AC023538.1-201ENST00000534576 736 ntBASIC2.22□□□□□ -2.05
VSX2P58304 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC2.22□□□□□ -2.05
VSX2P58304 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.22□□□□□ -2.05
VSX2P58304 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC2.22□□□□□ -2.05
VSX2P58304 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC2.22□□□□□ -2.05
VSX2P58304 AC105137.2-201ENST00000569073 466 ntBASIC2.22□□□□□ -2.05
VSX2P58304 MIR4509-3-201ENST00000578671 94 ntBASIC2.22□□□□□ -2.05
VSX2P58304 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.22□□□□□ -2.05
VSX2P58304 MIR4509-2-201ENST00000583920 94 ntBASIC2.22□□□□□ -2.05
VSX2P58304 HMGN2P15-201ENST00000585707 270 ntBASIC2.22□□□□□ -2.05
VSX2P58304 AC136601.2-201ENST00000604356 474 ntBASIC2.22□□□□□ -2.05
VSX2P58304 MTND4LP5-201ENST00000605152 292 ntBASIC2.22□□□□□ -2.05
VSX2P58304 AL133445.2-201ENST00000611191 527 ntBASIC2.22□□□□□ -2.05
VSX2P58304 AC087241.4-201ENST00000612441 480 ntBASIC2.22□□□□□ -2.05
VSX2P58304 AC011890.2-201ENST00000613393 294 ntBASIC2.22□□□□□ -2.05
VSX2P58304 MIR4509-1-201ENST00000618224 94 ntBASIC2.22□□□□□ -2.05
VSX2P58304 AC073308.1-201ENST00000623696 305 ntBASIC2.22□□□□□ -2.05
VSX2P58304 AC068880.5-201ENST00000624331 290 ntBASIC2.22□□□□□ -2.05
VSX2P58304 GMFB-210ENST00000628554 639 ntTSL 4 BASIC2.22□□□□□ -2.05
VSX2P58304 MTND1P37-201ENST00000636562 264 ntBASIC2.22□□□□□ -2.05
VSX2P58304 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
VSX2P58304 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.22□□□□□ -2.05
VSX2P58304 AP000776.1-201ENST00000530032 1663 ntBASIC2.22□□□□□ -2.05
VSX2P58304 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
VSX2P58304 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
VSX2P58304 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
VSX2P58304 RNU1-91P-201ENST00000364746 163 ntBASIC2.21□□□□□ -2.06
VSX2P58304 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC2.21□□□□□ -2.06
VSX2P58304 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.21□□□□□ -2.06
VSX2P58304 RNU6-217P-201ENST00000384164 104 ntBASIC2.21□□□□□ -2.06
VSX2P58304 U3.37-201ENST00000408528 213 ntBASIC2.21□□□□□ -2.06
VSX2P58304 AF274854.1-201ENST00000413236 615 ntBASIC2.21□□□□□ -2.06
VSX2P58304 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
VSX2P58304 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC2.21□□□□□ -2.06
VSX2P58304 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC2.21□□□□□ -2.06
VSX2P58304 AC092648.1-201ENST00000425870 423 ntBASIC2.21□□□□□ -2.06
VSX2P58304 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC2.21□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms