Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 Y_RNA.625-201ENST00000411256 107 ntBASIC3.68□□□□□ -1.82
SUMO3P55854 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC3.68□□□□□ -1.82
SUMO3P55854 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC3.68□□□□□ -1.82
SUMO3P55854 AL669831.1-202ENST00000428504 417 ntBASIC3.68□□□□□ -1.82
SUMO3P55854 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC3.68□□□□□ -1.82
SUMO3P55854 GTF2IP13-201ENST00000438487 386 ntBASIC3.68□□□□□ -1.82
SUMO3P55854 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC3.68□□□□□ -1.82
SUMO3P55854 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.68□□□□□ -1.82
SUMO3P55854 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC3.68□□□□□ -1.82
SUMO3P55854 GAS5-223ENST00000452197 483 ntTSL 3 BASIC3.68□□□□□ -1.82
SUMO3P55854 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC3.68□□□□□ -1.82
SUMO3P55854 RNA5SP310-201ENST00000459084 116 ntBASIC3.68□□□□□ -1.82
SUMO3P55854 RNU6-1208P-201ENST00000459588 107 ntBASIC3.68□□□□□ -1.82
SUMO3P55854 AC004801.2-202ENST00000463559 283 ntBASIC3.68□□□□□ -1.82
SUMO3P55854 Y_RNA.654-201ENST00000497848 106 ntBASIC3.68□□□□□ -1.82
SUMO3P55854 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC3.68□□□□□ -1.82
SUMO3P55854 AC098799.2-201ENST00000509466 868 ntBASIC3.68□□□□□ -1.82
SUMO3P55854 AP003122.3-201ENST00000526316 255 ntBASIC3.68□□□□□ -1.82
SUMO3P55854 AC084851.1-201ENST00000529105 249 ntBASIC3.68□□□□□ -1.82
SUMO3P55854 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.68□□□□□ -1.82
SUMO3P55854 AC023050.3-201ENST00000541142 333 ntBASIC3.68□□□□□ -1.82
SUMO3P55854 AC091516.1-201ENST00000549191 703 ntBASIC3.68□□□□□ -1.82
SUMO3P55854 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC3.68□□□□□ -1.82
SUMO3P55854 OR11H5P-201ENST00000554039 926 ntBASIC3.68□□□□□ -1.82
SUMO3P55854 AL157871.3-201ENST00000557231 293 ntBASIC3.68□□□□□ -1.82
SUMO3P55854 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.68□□□□□ -1.82
SUMO3P55854 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.68□□□□□ -1.82
SUMO3P55854 AC005730.3-201ENST00000583067 366 ntBASIC3.68□□□□□ -1.82
SUMO3P55854 MIR548AC-201ENST00000585049 88 ntBASIC3.68□□□□□ -1.82
SUMO3P55854 AC011712.1-201ENST00000588959 234 ntBASIC3.68□□□□□ -1.82
SUMO3P55854 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.68□□□□□ -1.82
SUMO3P55854 AC128687.2-201ENST00000609657 566 ntBASIC3.68□□□□□ -1.82
SUMO3P55854 AC012531.5-201ENST00000611375 151 ntBASIC3.68□□□□□ -1.82
SUMO3P55854 RMST_9.1-201ENST00000619945 193 ntBASIC3.68□□□□□ -1.82
SUMO3P55854 AL773545.4-201ENST00000637262 310 ntBASIC3.68□□□□□ -1.82
SUMO3P55854 AL513478.4-201ENST00000641636 310 ntBASIC3.68□□□□□ -1.82
SUMO3P55854 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
SUMO3P55854 MAPK10-372ENST00000641954 3413 ntBASIC3.68□□□□□ -1.82
SUMO3P55854 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.68□□□□□ -1.82
SUMO3P55854 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
SUMO3P55854 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.67□□□□□ -1.82
SUMO3P55854 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.67□□□□□ -1.82
SUMO3P55854 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC3.67□□□□□ -1.82
SUMO3P55854 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
SUMO3P55854 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.67□□□□□ -1.82
SUMO3P55854 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.67□□□□□ -1.82
SUMO3P55854 MIR448-201ENST00000362131 111 ntBASIC3.67□□□□□ -1.82
SUMO3P55854 Y_RNA.100-201ENST00000363141 102 ntBASIC3.67□□□□□ -1.82
SUMO3P55854 RNU6-522P-201ENST00000364497 107 ntBASIC3.67□□□□□ -1.82
SUMO3P55854 Y_RNA.378-201ENST00000365652 113 ntBASIC3.67□□□□□ -1.82
SUMO3P55854 RNU6-395P-201ENST00000365662 106 ntBASIC3.67□□□□□ -1.82
SUMO3P55854 AC068538.1-201ENST00000376856 336 ntBASIC3.67□□□□□ -1.82
SUMO3P55854 RNU6-217P-201ENST00000384164 104 ntBASIC3.67□□□□□ -1.82
SUMO3P55854 RNU6-140P-201ENST00000384566 108 ntBASIC3.67□□□□□ -1.82
SUMO3P55854 SNORA1.3-201ENST00000384676 136 ntBASIC3.67□□□□□ -1.82
SUMO3P55854 MIR93-201ENST00000385024 80 ntBASIC3.67□□□□□ -1.82
SUMO3P55854 SNORA16.2-201ENST00000390991 127 ntBASIC3.67□□□□□ -1.82
SUMO3P55854 BX323014.1-201ENST00000412876 237 ntBASIC3.67□□□□□ -1.82
SUMO3P55854 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.67□□□□□ -1.82
SUMO3P55854 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC3.67□□□□□ -1.82
SUMO3P55854 AL356095.1-201ENST00000417217 199 ntBASIC3.67□□□□□ -1.82
SUMO3P55854 ZNF863P-201ENST00000426746 417 ntBASIC3.67□□□□□ -1.82
SUMO3P55854 SNRPEP4-201ENST00000435815 279 ntBASIC3.67□□□□□ -1.82
SUMO3P55854 AC098614.3-201ENST00000438957 440 ntBASIC3.67□□□□□ -1.82
SUMO3P55854 HMGB3P11-201ENST00000440127 604 ntBASIC3.67□□□□□ -1.82
SUMO3P55854 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC3.67□□□□□ -1.82
SUMO3P55854 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
SUMO3P55854 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC3.67□□□□□ -1.82
SUMO3P55854 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.67□□□□□ -1.82
SUMO3P55854 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC3.67□□□□□ -1.82
SUMO3P55854 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC3.67□□□□□ -1.82
SUMO3P55854 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC3.67□□□□□ -1.82
SUMO3P55854 CEACAMP4-201ENST00000457676 421 ntBASIC3.67□□□□□ -1.82
SUMO3P55854 AC007547.1-201ENST00000462177 490 ntBASIC3.67□□□□□ -1.82
SUMO3P55854 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.67□□□□□ -1.82
SUMO3P55854 RN7SL860P-201ENST00000473738 223 ntBASIC3.67□□□□□ -1.82
SUMO3P55854 AL132838.2-201ENST00000492041 314 ntBASIC3.67□□□□□ -1.82
SUMO3P55854 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC3.67□□□□□ -1.82
SUMO3P55854 AC009901.1-201ENST00000506703 541 ntBASIC3.67□□□□□ -1.82
SUMO3P55854 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
SUMO3P55854 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC3.67□□□□□ -1.82
SUMO3P55854 RNU2-69P-201ENST00000516061 100 ntBASIC3.67□□□□□ -1.82
SUMO3P55854 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC3.67□□□□□ -1.82
SUMO3P55854 GNRHR2P1-201ENST00000555315 631 ntBASIC3.67□□□□□ -1.82
SUMO3P55854 AL118558.2-201ENST00000556294 238 ntBASIC3.67□□□□□ -1.82
SUMO3P55854 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC3.67□□□□□ -1.82
SUMO3P55854 MIR3941-201ENST00000582572 103 ntBASIC3.67□□□□□ -1.82
SUMO3P55854 AC004805.2-201ENST00000605382 482 ntBASIC3.67□□□□□ -1.82
SUMO3P55854 AC083809.1-201ENST00000615051 472 ntBASIC3.67□□□□□ -1.82
SUMO3P55854 SNORD39.4-201ENST00000620099 78 ntBASIC3.67□□□□□ -1.82
SUMO3P55854 AF117829.1-206ENST00000621883 3802 ntBASIC3.67□□□□□ -1.82
SUMO3P55854 AC090617.10-201ENST00000624308 134 ntBASIC3.67□□□□□ -1.82
SUMO3P55854 AP003400.5-201ENST00000624827 617 ntBASIC3.67□□□□□ -1.82
SUMO3P55854 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.67□□□□□ -1.82
SUMO3P55854 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.67□□□□□ -1.82
SUMO3P55854 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
SUMO3P55854 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
SUMO3P55854 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.66□□□□□ -1.82
SUMO3P55854 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
SUMO3P55854 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 93 ms