Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.43□□□□□ -2.02
PKNOX1P55347 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.43□□□□□ -2.02
PKNOX1P55347 SUB1P1-201ENST00000524415 382 ntBASIC2.43□□□□□ -2.02
PKNOX1P55347 AC087276.1-201ENST00000529659 480 ntBASIC2.43□□□□□ -2.02
PKNOX1P55347 AC013828.2-201ENST00000532487 235 ntBASIC2.43□□□□□ -2.02
PKNOX1P55347 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC2.43□□□□□ -2.02
PKNOX1P55347 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC2.43□□□□□ -2.02
PKNOX1P55347 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.43□□□□□ -2.02
PKNOX1P55347 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC2.43□□□□□ -2.02
PKNOX1P55347 AL161729.4-201ENST00000604650 476 ntBASIC2.43□□□□□ -2.02
PKNOX1P55347 AC007619.2-201ENST00000605743 379 ntBASIC2.43□□□□□ -2.02
PKNOX1P55347 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
PKNOX1P55347 AL607023.1-201ENST00000620045 248 ntBASIC2.43□□□□□ -2.02
PKNOX1P55347 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
PKNOX1P55347 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
PKNOX1P55347 CR848007.1-201ENST00000442354 1699 ntBASIC2.43□□□□□ -2.02
PKNOX1P55347 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
PKNOX1P55347 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
PKNOX1P55347 FTLP6-201ENST00000355274 422 ntBASIC2.42□□□□□ -2.02
PKNOX1P55347 RNU1-51P-201ENST00000365345 176 ntBASIC2.42□□□□□ -2.02
PKNOX1P55347 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC2.42□□□□□ -2.02
PKNOX1P55347 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC2.42□□□□□ -2.02
PKNOX1P55347 SNORA9-201ENST00000384215 133 ntBASIC2.42□□□□□ -2.02
PKNOX1P55347 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
PKNOX1P55347 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
PKNOX1P55347 AC098614.2-201ENST00000426040 255 ntBASIC2.42□□□□□ -2.02
PKNOX1P55347 AL035407.1-201ENST00000429211 571 ntBASIC2.42□□□□□ -2.02
PKNOX1P55347 CR769767.1-201ENST00000436337 346 ntBASIC2.42□□□□□ -2.02
PKNOX1P55347 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC2.42□□□□□ -2.02
PKNOX1P55347 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC2.42□□□□□ -2.02
PKNOX1P55347 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC2.42□□□□□ -2.02
PKNOX1P55347 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.42□□□□□ -2.02
PKNOX1P55347 AP000936.2-201ENST00000447151 681 ntBASIC2.42□□□□□ -2.02
PKNOX1P55347 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.42□□□□□ -2.02
PKNOX1P55347 ANKRD26P4-201ENST00000455755 950 ntBASIC2.42□□□□□ -2.02
PKNOX1P55347 SNORD109B-201ENST00000458961 67 ntBASIC2.42□□□□□ -2.02
PKNOX1P55347 SNORD109A-201ENST00000459128 67 ntBASIC2.42□□□□□ -2.02
PKNOX1P55347 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC2.42□□□□□ -2.02
PKNOX1P55347 AC010631.1-201ENST00000474150 156 ntBASIC2.42□□□□□ -2.02
PKNOX1P55347 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.42□□□□□ -2.02
PKNOX1P55347 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC2.42□□□□□ -2.02
PKNOX1P55347 AC034244.1-201ENST00000507687 207 ntBASIC2.42□□□□□ -2.02
PKNOX1P55347 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC2.42□□□□□ -2.02
PKNOX1P55347 AC113155.1-201ENST00000511141 769 ntBASIC2.42□□□□□ -2.02
PKNOX1P55347 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC2.42□□□□□ -2.02
PKNOX1P55347 SNORA70.24-201ENST00000517233 118 ntBASIC2.42□□□□□ -2.02
PKNOX1P55347 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.42□□□□□ -2.02
PKNOX1P55347 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC2.42□□□□□ -2.02
PKNOX1P55347 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC2.42□□□□□ -2.02
PKNOX1P55347 AP004247.1-201ENST00000531556 1289 ntBASIC2.42□□□□□ -2.02
PKNOX1P55347 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC2.42□□□□□ -2.02
PKNOX1P55347 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.42□□□□□ -2.02
PKNOX1P55347 AC023050.2-201ENST00000544968 387 ntBASIC2.42□□□□□ -2.02
PKNOX1P55347 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC2.42□□□□□ -2.02
PKNOX1P55347 AC010546.1-201ENST00000569391 485 ntBASIC2.42□□□□□ -2.02
PKNOX1P55347 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC2.42□□□□□ -2.02
PKNOX1P55347 AC002545.1-201ENST00000592511 181 ntBASIC2.42□□□□□ -2.02
PKNOX1P55347 BNIP3P23-201ENST00000599655 511 ntBASIC2.42□□□□□ -2.02
PKNOX1P55347 AL645944.1-201ENST00000603857 493 ntBASIC2.42□□□□□ -2.02
PKNOX1P55347 AL031281.1-201ENST00000604049 488 ntBASIC2.42□□□□□ -2.02
PKNOX1P55347 ATP1B3P1-201ENST00000605365 821 ntBASIC2.42□□□□□ -2.02
PKNOX1P55347 AC013244.3-201ENST00000605614 388 ntBASIC2.42□□□□□ -2.02
PKNOX1P55347 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.42□□□□□ -2.02
PKNOX1P55347 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
PKNOX1P55347 AC135776.4-201ENST00000624300 1904 ntBASIC2.42□□□□□ -2.02
PKNOX1P55347 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
PKNOX1P55347 CCT4P2-201ENST00000233836 1548 ntBASIC2.42□□□□□ -2.02
PKNOX1P55347 AC092125.1-201ENST00000562568 1995 ntBASIC2.41□□□□□ -2.02
PKNOX1P55347 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC2.41□□□□□ -2.02
PKNOX1P55347 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
PKNOX1P55347 MTND4P16-201ENST00000466108 1367 ntBASIC2.41□□□□□ -2.02
PKNOX1P55347 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
PKNOX1P55347 AL391994.1-201ENST00000254724 282 ntBASIC2.41□□□□□ -2.02
PKNOX1P55347 MIR208A-201ENST00000362287 71 ntBASIC2.41□□□□□ -2.02
PKNOX1P55347 RNU6-140P-201ENST00000384566 108 ntBASIC2.41□□□□□ -2.02
PKNOX1P55347 SNORA41-201ENST00000384675 132 ntBASIC2.41□□□□□ -2.02
PKNOX1P55347 MIR27B-201ENST00000385129 97 ntBASIC2.41□□□□□ -2.02
PKNOX1P55347 AC119751.3-201ENST00000399720 670 ntBASIC2.41□□□□□ -2.02
PKNOX1P55347 AL139039.1-201ENST00000401900 692 ntBASIC2.41□□□□□ -2.02
PKNOX1P55347 CCNG1P1-201ENST00000406783 885 ntBASIC2.41□□□□□ -2.02
PKNOX1P55347 RPL21P24-201ENST00000413752 448 ntBASIC2.41□□□□□ -2.02
PKNOX1P55347 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC2.41□□□□□ -2.02
PKNOX1P55347 USP9YP26-201ENST00000421008 661 ntBASIC2.41□□□□□ -2.02
PKNOX1P55347 AL022400.1-201ENST00000423946 935 ntBASIC2.41□□□□□ -2.02
PKNOX1P55347 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.41□□□□□ -2.02
PKNOX1P55347 AL358075.3-201ENST00000426289 226 ntBASIC2.41□□□□□ -2.02
PKNOX1P55347 ZNF863P-201ENST00000426746 417 ntBASIC2.41□□□□□ -2.02
PKNOX1P55347 GTF2IP20-201ENST00000431663 360 ntBASIC2.41□□□□□ -2.02
PKNOX1P55347 AC098826.1-201ENST00000433943 471 ntBASIC2.41□□□□□ -2.02
PKNOX1P55347 Z73417.1-201ENST00000447373 778 ntBASIC2.41□□□□□ -2.02
PKNOX1P55347 AC020550.1-201ENST00000447385 163 ntBASIC2.41□□□□□ -2.02
PKNOX1P55347 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC2.41□□□□□ -2.02
PKNOX1P55347 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC2.41□□□□□ -2.02
PKNOX1P55347 SNORD11.1-201ENST00000459482 85 ntBASIC2.41□□□□□ -2.02
PKNOX1P55347 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC2.41□□□□□ -2.02
PKNOX1P55347 AC055855.1-201ENST00000489563 579 ntBASIC2.41□□□□□ -2.02
PKNOX1P55347 SUMO2P6-201ENST00000505273 288 ntBASIC2.41□□□□□ -2.02
PKNOX1P55347 LTV1P1-201ENST00000510683 1237 ntBASIC2.41□□□□□ -2.02
PKNOX1P55347 MRPS36P3-201ENST00000519284 130 ntBASIC2.41□□□□□ -2.02
PKNOX1P55347 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC2.41□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 155.3 ms