Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC3.05□□□□□ -1.92
CDH11P55287 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC3.05□□□□□ -1.92
CDH11P55287 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.05□□□□□ -1.92
CDH11P55287 HMGN2P16-201ENST00000456802 261 ntBASIC3.05□□□□□ -1.92
CDH11P55287 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.05□□□□□ -1.92
CDH11P55287 AL049714.1-201ENST00000466686 347 ntBASIC3.05□□□□□ -1.92
CDH11P55287 RPS27AP1-201ENST00000475545 471 ntBASIC3.05□□□□□ -1.92
CDH11P55287 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC3.05□□□□□ -1.92
CDH11P55287 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC3.05□□□□□ -1.92
CDH11P55287 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.05□□□□□ -1.92
CDH11P55287 NRON-201ENST00000517270 370 ntBASIC3.05□□□□□ -1.92
CDH11P55287 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.05□□□□□ -1.92
CDH11P55287 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC3.05□□□□□ -1.92
CDH11P55287 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC3.05□□□□□ -1.92
CDH11P55287 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC3.05□□□□□ -1.92
CDH11P55287 FAM60DP-201ENST00000524174 632 ntBASIC3.05□□□□□ -1.92
CDH11P55287 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC3.05□□□□□ -1.92
CDH11P55287 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
CDH11P55287 FAM92A1P1-201ENST00000528023 890 ntBASIC3.05□□□□□ -1.92
CDH11P55287 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.05□□□□□ -1.92
CDH11P55287 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
CDH11P55287 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.05□□□□□ -1.92
CDH11P55287 AF038458.1-201ENST00000588406 262 ntBASIC3.05□□□□□ -1.92
CDH11P55287 AC107294.3-201ENST00000609211 526 ntBASIC3.05□□□□□ -1.92
CDH11P55287 AL161734.1-201ENST00000609720 557 ntBASIC3.05□□□□□ -1.92
CDH11P55287 AC124864.2-201ENST00000624736 186 ntBASIC3.05□□□□□ -1.92
CDH11P55287 AC073476.4-201ENST00000628409 72 ntBASIC3.05□□□□□ -1.92
CDH11P55287 ABBA01000935.2-201ENST00000637477 838 ntBASIC3.05□□□□□ -1.92
CDH11P55287 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
CDH11P55287 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
CDH11P55287 AL049781.1-201ENST00000623195 3585 ntBASIC3.05□□□□□ -1.92
CDH11P55287 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.04□□□□□ -1.92
CDH11P55287 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC3.04□□□□□ -1.92
CDH11P55287 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
CDH11P55287 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
CDH11P55287 RNU6-108P-201ENST00000365558 107 ntBASIC3.04□□□□□ -1.92
CDH11P55287 MIR491-201ENST00000384877 84 ntBASIC3.04□□□□□ -1.92
CDH11P55287 MIR483-201ENST00000385070 76 ntBASIC3.04□□□□□ -1.92
CDH11P55287 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
CDH11P55287 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC3.04□□□□□ -1.92
CDH11P55287 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.04□□□□□ -1.92
CDH11P55287 AL158156.1-201ENST00000422509 473 ntBASIC3.04□□□□□ -1.92
CDH11P55287 AC018630.2-202ENST00000422992 927 ntBASIC3.04□□□□□ -1.92
CDH11P55287 MTCO2P19-201ENST00000427513 598 ntBASIC3.04□□□□□ -1.92
CDH11P55287 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC3.04□□□□□ -1.92
CDH11P55287 ATP5JP1-201ENST00000431631 322 ntBASIC3.04□□□□□ -1.92
CDH11P55287 MTND3P21-201ENST00000433774 331 ntBASIC3.04□□□□□ -1.92
CDH11P55287 AL451074.3-201ENST00000437709 472 ntBASIC3.04□□□□□ -1.92
CDH11P55287 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC3.04□□□□□ -1.92
CDH11P55287 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.04□□□□□ -1.92
CDH11P55287 SNRPGP6-201ENST00000451124 220 ntBASIC3.04□□□□□ -1.92
CDH11P55287 NDUFAF4P4-201ENST00000454883 502 ntBASIC3.04□□□□□ -1.92
CDH11P55287 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC3.04□□□□□ -1.92
CDH11P55287 AC105914.1-201ENST00000511798 226 ntBASIC3.04□□□□□ -1.92
CDH11P55287 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.04□□□□□ -1.92
CDH11P55287 RNU2-10P-201ENST00000516375 211 ntBASIC3.04□□□□□ -1.92
CDH11P55287 AC068657.1-201ENST00000520807 306 ntBASIC3.04□□□□□ -1.92
CDH11P55287 AC011979.2-201ENST00000527568 352 ntBASIC3.04□□□□□ -1.92
CDH11P55287 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC3.04□□□□□ -1.92
CDH11P55287 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC3.04□□□□□ -1.92
CDH11P55287 NCAPGP2-201ENST00000557911 754 ntBASIC3.04□□□□□ -1.92
CDH11P55287 TPRKBP2-201ENST00000565969 475 ntBASIC3.04□□□□□ -1.92
CDH11P55287 MIR3921-201ENST00000577308 85 ntBASIC3.04□□□□□ -1.92
CDH11P55287 AC006557.5-201ENST00000603126 811 ntBASIC3.04□□□□□ -1.92
CDH11P55287 AP002360.4-201ENST00000606980 481 ntBASIC3.04□□□□□ -1.92
CDH11P55287 AC006023.2-201ENST00000609916 167 ntBASIC3.04□□□□□ -1.92
CDH11P55287 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
CDH11P55287 AC090132.2-201ENST00000615881 347 ntBASIC3.04□□□□□ -1.92
CDH11P55287 LRRC77P-213ENST00000637727 880 ntBASIC3.04□□□□□ -1.92
CDH11P55287 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.04□□□□□ -1.92
CDH11P55287 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.03□□□□□ -1.92
CDH11P55287 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
CDH11P55287 RNU1-33P-201ENST00000364249 162 ntBASIC3.03□□□□□ -1.92
CDH11P55287 Y_RNA.296-201ENST00000364930 108 ntBASIC3.03□□□□□ -1.92
CDH11P55287 RNU6-74P-201ENST00000384235 107 ntBASIC3.03□□□□□ -1.92
CDH11P55287 MIR558-201ENST00000384920 94 ntBASIC3.03□□□□□ -1.92
CDH11P55287 MIR514A1-201ENST00000385133 98 ntBASIC3.03□□□□□ -1.92
CDH11P55287 U3.42-201ENST00000408746 214 ntBASIC3.03□□□□□ -1.92
CDH11P55287 NDUFB4P7-201ENST00000423198 363 ntBASIC3.03□□□□□ -1.92
CDH11P55287 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC3.03□□□□□ -1.92
CDH11P55287 AC097713.2-201ENST00000430199 356 ntBASIC3.03□□□□□ -1.92
CDH11P55287 AC005019.1-201ENST00000436455 431 ntBASIC3.03□□□□□ -1.92
CDH11P55287 RPS15AP9-201ENST00000439856 381 ntBASIC3.03□□□□□ -1.92
CDH11P55287 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC3.03□□□□□ -1.92
CDH11P55287 AC020550.1-201ENST00000447385 163 ntBASIC3.03□□□□□ -1.92
CDH11P55287 SNORD97-201ENST00000459187 142 ntBASIC3.03□□□□□ -1.92
CDH11P55287 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC3.03□□□□□ -1.92
CDH11P55287 HMGB3P15-201ENST00000507326 574 ntBASIC3.03□□□□□ -1.92
CDH11P55287 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.03□□□□□ -1.92
CDH11P55287 RNA5SP468-201ENST00000516782 93 ntBASIC3.03□□□□□ -1.92
CDH11P55287 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.03□□□□□ -1.92
CDH11P55287 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.03□□□□□ -1.92
CDH11P55287 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC3.03□□□□□ -1.92
CDH11P55287 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC3.03□□□□□ -1.92
CDH11P55287 RPS3AP4-201ENST00000555161 764 ntBASIC3.03□□□□□ -1.92
CDH11P55287 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.03□□□□□ -1.92
CDH11P55287 AP003465.2-201ENST00000602571 373 ntBASIC3.03□□□□□ -1.92
CDH11P55287 SDR42E1P2-201ENST00000614861 481 ntBASIC3.03□□□□□ -1.92
CDH11P55287 AC010133.1-201ENST00000615809 842 ntBASIC3.03□□□□□ -1.92
CDH11P55287 AC068792.1-201ENST00000621354 417 ntBASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms