Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.19□□□□□ -1.9
CLK1P49759 SNORA5A-201ENST00000384111 134 ntBASIC3.19□□□□□ -1.9
CLK1P49759 SNORA36C-201ENST00000384289 132 ntBASIC3.19□□□□□ -1.9
CLK1P49759 MIR1305-201ENST00000408300 86 ntBASIC3.19□□□□□ -1.9
CLK1P49759 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.19□□□□□ -1.9
CLK1P49759 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC3.19□□□□□ -1.9
CLK1P49759 USP9YP13-201ENST00000417797 480 ntBASIC3.19□□□□□ -1.9
CLK1P49759 AC093151.1-201ENST00000427711 313 ntBASIC3.19□□□□□ -1.9
CLK1P49759 MRPS10P2-201ENST00000431226 381 ntBASIC3.19□□□□□ -1.9
CLK1P49759 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC3.19□□□□□ -1.9
CLK1P49759 AL049734.2-201ENST00000441066 616 ntBASIC3.19□□□□□ -1.9
CLK1P49759 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC3.19□□□□□ -1.9
CLK1P49759 MTND1P1-201ENST00000445453 368 ntBASIC3.19□□□□□ -1.9
CLK1P49759 AL358232.1-201ENST00000448030 501 ntBASIC3.19□□□□□ -1.9
CLK1P49759 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC3.19□□□□□ -1.9
CLK1P49759 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC3.19□□□□□ -1.9
CLK1P49759 MTND1P9-201ENST00000453775 944 ntBASIC3.19□□□□□ -1.9
CLK1P49759 AL033528.1-201ENST00000453780 140 ntBASIC3.19□□□□□ -1.9
CLK1P49759 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.19□□□□□ -1.9
CLK1P49759 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC3.19□□□□□ -1.9
CLK1P49759 CENPBD1P1-201ENST00000464061 469 ntBASIC3.19□□□□□ -1.9
CLK1P49759 AL135752.1-201ENST00000479477 471 ntBASIC3.19□□□□□ -1.9
CLK1P49759 AC021205.2-201ENST00000480069 347 ntBASIC3.19□□□□□ -1.9
CLK1P49759 AC004924.1-201ENST00000480160 781 ntBASIC3.19□□□□□ -1.9
CLK1P49759 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC3.19□□□□□ -1.9
CLK1P49759 RN7SL283P-201ENST00000489055 303 ntBASIC3.19□□□□□ -1.9
CLK1P49759 AC106872.3-201ENST00000495104 446 ntBASIC3.19□□□□□ -1.9
CLK1P49759 AL358832.1-201ENST00000497800 389 ntBASIC3.19□□□□□ -1.9
CLK1P49759 AIG1P1-201ENST00000503376 148 ntBASIC3.19□□□□□ -1.9
CLK1P49759 AC022447.3-201ENST00000506865 495 ntBASIC3.19□□□□□ -1.9
CLK1P49759 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC3.19□□□□□ -1.9
CLK1P49759 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.19□□□□□ -1.9
CLK1P49759 SNORA31.18-201ENST00000517043 134 ntBASIC3.19□□□□□ -1.9
CLK1P49759 AC107934.2-201ENST00000518653 310 ntBASIC3.19□□□□□ -1.9
CLK1P49759 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC3.19□□□□□ -1.9
CLK1P49759 AC022878.1-201ENST00000530684 149 ntBASIC3.19□□□□□ -1.9
CLK1P49759 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC3.19□□□□□ -1.9
CLK1P49759 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC3.19□□□□□ -1.9
CLK1P49759 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.19□□□□□ -1.9
CLK1P49759 AL355836.1-201ENST00000555951 870 ntBASIC3.19□□□□□ -1.9
CLK1P49759 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC3.19□□□□□ -1.9
CLK1P49759 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC3.19□□□□□ -1.9
CLK1P49759 AP002360.4-201ENST00000606980 481 ntBASIC3.19□□□□□ -1.9
CLK1P49759 AC090517.2-201ENST00000614966 680 ntBASIC3.19□□□□□ -1.9
CLK1P49759 AL445264.1-201ENST00000621719 171 ntBASIC3.19□□□□□ -1.9
CLK1P49759 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CLK1P49759 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
CLK1P49759 ANKRD62P1-201ENST00000434304 1623 ntBASIC3.19□□□□□ -1.9
CLK1P49759 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CLK1P49759 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
CLK1P49759 MIR148B-201ENST00000362252 99 ntBASIC3.18□□□□□ -1.9
CLK1P49759 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CLK1P49759 RNU6-533P-201ENST00000384144 107 ntBASIC3.18□□□□□ -1.9
CLK1P49759 RNU6-809P-201ENST00000384461 107 ntBASIC3.18□□□□□ -1.9
CLK1P49759 PTMAP2-201ENST00000397627 327 ntBASIC3.18□□□□□ -1.9
CLK1P49759 SNX10-203ENST00000409367 746 ntTSL 5 BASIC3.18□□□□□ -1.9
CLK1P49759 Y_RNA.598-201ENST00000410480 95 ntBASIC3.18□□□□□ -1.9
CLK1P49759 Y_RNA.608-201ENST00000410647 95 ntBASIC3.18□□□□□ -1.9
CLK1P49759 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC3.18□□□□□ -1.9
CLK1P49759 SYF2P2-201ENST00000417620 583 ntBASIC3.18□□□□□ -1.9
CLK1P49759 MTND4LP11-201ENST00000422184 280 ntBASIC3.18□□□□□ -1.9
CLK1P49759 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC3.18□□□□□ -1.9
CLK1P49759 AL513043.1-201ENST00000439124 535 ntBASIC3.18□□□□□ -1.9
CLK1P49759 MTATP6P23-201ENST00000440153 476 ntBASIC3.18□□□□□ -1.9
CLK1P49759 CBWD4P-201ENST00000445695 655 ntBASIC3.18□□□□□ -1.9
CLK1P49759 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CLK1P49759 MTND4P18-201ENST00000447010 465 ntBASIC3.18□□□□□ -1.9
CLK1P49759 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC3.18□□□□□ -1.9
CLK1P49759 GAPDHP27-201ENST00000447427 1020 ntBASIC3.18□□□□□ -1.9
CLK1P49759 AL590365.1-201ENST00000450788 243 ntBASIC3.18□□□□□ -1.9
CLK1P49759 AC003071.1-201ENST00000451219 789 ntBASIC3.18□□□□□ -1.9
CLK1P49759 FGF7P6-202ENST00000451282 293 ntBASIC3.18□□□□□ -1.9
CLK1P49759 AC007967.1-201ENST00000455422 1159 ntBASIC3.18□□□□□ -1.9
CLK1P49759 BX322784.1-201ENST00000455793 1077 ntBASIC3.18□□□□□ -1.9
CLK1P49759 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC3.18□□□□□ -1.9
CLK1P49759 AC103975.1-201ENST00000482506 483 ntBASIC3.18□□□□□ -1.9
CLK1P49759 RPL9P6-201ENST00000492764 598 ntBASIC3.18□□□□□ -1.9
CLK1P49759 RNU6-506P-201ENST00000516553 94 ntBASIC3.18□□□□□ -1.9
CLK1P49759 RNU1-45P-201ENST00000517191 141 ntBASIC3.18□□□□□ -1.9
CLK1P49759 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC3.18□□□□□ -1.9
CLK1P49759 TRMT10BP1-201ENST00000519377 943 ntBASIC3.18□□□□□ -1.9
CLK1P49759 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC3.18□□□□□ -1.9
CLK1P49759 COX6CP5-201ENST00000527162 228 ntBASIC3.18□□□□□ -1.9
CLK1P49759 AC103843.2-201ENST00000530523 682 ntBASIC3.18□□□□□ -1.9
CLK1P49759 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.18□□□□□ -1.9
CLK1P49759 NTS-203ENST00000551529 801 ntTSL 3 BASIC3.18□□□□□ -1.9
CLK1P49759 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.18□□□□□ -1.9
CLK1P49759 TRAV28-201ENST00000557548 323 ntBASIC3.18□□□□□ -1.9
CLK1P49759 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC3.18□□□□□ -1.9
CLK1P49759 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC3.18□□□□□ -1.9
CLK1P49759 AC009977.1-201ENST00000586015 570 ntBASIC3.18□□□□□ -1.9
CLK1P49759 BNIP3P8-201ENST00000597863 560 ntBASIC3.18□□□□□ -1.9
CLK1P49759 AC090578.1-201ENST00000604955 591 ntBASIC3.18□□□□□ -1.9
CLK1P49759 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC3.18□□□□□ -1.9
CLK1P49759 AF250324.2-201ENST00000608299 610 ntBASIC3.18□□□□□ -1.9
CLK1P49759 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC3.18□□□□□ -1.9
CLK1P49759 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
CLK1P49759 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
CLK1P49759 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
CLK1P49759 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 116 ms