Protein–RNA interactions for Protein: P38398

BRCA1, Breast cancer type 1 susceptibility protein, humanhuman

Known RBP Predictions only

Length 1,863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1P38398 RNA5SP480-201ENST00000516840 109 ntBASIC2.31□□□□□ -2.04
BRCA1P38398 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC2.31□□□□□ -2.04
BRCA1P38398 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC2.31□□□□□ -2.04
BRCA1P38398 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
BRCA1P38398 ACTR3BP3-201ENST00000565577 979 ntBASIC2.31□□□□□ -2.04
BRCA1P38398 MTCO1P40-201ENST00000574371 625 ntBASIC2.31□□□□□ -2.04
BRCA1P38398 RNU6-1192P-201ENST00000612197 107 ntBASIC2.31□□□□□ -2.04
BRCA1P38398 AL449363.1-201ENST00000617815 186 ntBASIC2.31□□□□□ -2.04
BRCA1P38398 RNU6-489P-201ENST00000618289 107 ntBASIC2.31□□□□□ -2.04
BRCA1P38398 AC040168.1-201ENST00000623594 991 ntBASIC2.31□□□□□ -2.04
BRCA1P38398 AC107982.1-201ENST00000507171 1300 ntBASIC2.3□□□□□ -2.04
BRCA1P38398 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
BRCA1P38398 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.3□□□□□ -2.04
BRCA1P38398 SNORA63.3-201ENST00000362682 132 ntBASIC2.3□□□□□ -2.04
BRCA1P38398 RNU5B-1-201ENST00000363286 116 ntBASIC2.3□□□□□ -2.04
BRCA1P38398 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
BRCA1P38398 AC019129.1-201ENST00000403786 261 ntBASIC2.3□□□□□ -2.04
BRCA1P38398 SEPT7P5-201ENST00000434048 306 ntBASIC2.3□□□□□ -2.04
BRCA1P38398 PTGES3P1-201ENST00000439531 483 ntBASIC2.3□□□□□ -2.04
BRCA1P38398 MTND2P20-201ENST00000440805 661 ntBASIC2.3□□□□□ -2.04
BRCA1P38398 AL591719.1-201ENST00000444669 744 ntBASIC2.3□□□□□ -2.04
BRCA1P38398 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.3□□□□□ -2.04
BRCA1P38398 AC023424.2-201ENST00000493479 777 ntBASIC2.3□□□□□ -2.04
BRCA1P38398 AC093752.1-206ENST00000511823 336 ntBASIC2.3□□□□□ -2.04
BRCA1P38398 RAC1P5-201ENST00000512182 576 ntBASIC2.3□□□□□ -2.04
BRCA1P38398 MTND2P31-201ENST00000512602 616 ntBASIC2.3□□□□□ -2.04
BRCA1P38398 AC126365.2-201ENST00000580630 379 ntBASIC2.3□□□□□ -2.04
BRCA1P38398 AC008507.2-201ENST00000588402 1176 ntBASIC2.3□□□□□ -2.04
BRCA1P38398 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.3□□□□□ -2.04
BRCA1P38398 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC2.29□□□□□ -2.04
BRCA1P38398 PABPC1P9-201ENST00000426076 1612 ntBASIC2.29□□□□□ -2.04
BRCA1P38398 AC005832.2-201ENST00000538921 1430 ntBASIC2.29□□□□□ -2.04
BRCA1P38398 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
BRCA1P38398 RNU6-1180P-201ENST00000364935 107 ntBASIC2.29□□□□□ -2.04
BRCA1P38398 RNU6-1122P-201ENST00000384449 107 ntBASIC2.29□□□□□ -2.04
BRCA1P38398 RNA5SP252-201ENST00000391131 119 ntBASIC2.29□□□□□ -2.04
BRCA1P38398 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC2.29□□□□□ -2.04
BRCA1P38398 MTATP6P27-201ENST00000416987 621 ntBASIC2.29□□□□□ -2.04
BRCA1P38398 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC2.29□□□□□ -2.04
BRCA1P38398 MTND1P9-201ENST00000453775 944 ntBASIC2.29□□□□□ -2.04
BRCA1P38398 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.29□□□□□ -2.04
BRCA1P38398 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC2.29□□□□□ -2.04
BRCA1P38398 AC097493.1-201ENST00000463958 372 ntBASIC2.29□□□□□ -2.04
BRCA1P38398 AC098799.2-201ENST00000509466 868 ntBASIC2.29□□□□□ -2.04
BRCA1P38398 AL512347.1-201ENST00000566420 503 ntBASIC2.29□□□□□ -2.04
BRCA1P38398 AL158211.4-201ENST00000606988 584 ntBASIC2.29□□□□□ -2.04
BRCA1P38398 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC2.29□□□□□ -2.04
BRCA1P38398 AC004067.1-201ENST00000608733 700 ntBASIC2.29□□□□□ -2.04
BRCA1P38398 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC2.29□□□□□ -2.04
BRCA1P38398 KPNA2P1-201ENST00000458289 1591 ntBASIC2.29□□□□□ -2.04
BRCA1P38398 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
BRCA1P38398 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
BRCA1P38398 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.29□□□□□ -2.04
BRCA1P38398 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.29□□□□□ -2.04
BRCA1P38398 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
BRCA1P38398 RNU6-882P-201ENST00000391025 103 ntBASIC2.28□□□□□ -2.04
BRCA1P38398 RNU6-754P-201ENST00000391166 107 ntBASIC2.28□□□□□ -2.04
BRCA1P38398 AC016769.3-201ENST00000396562 315 ntBASIC2.28□□□□□ -2.04
BRCA1P38398 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.28□□□□□ -2.04
BRCA1P38398 MIR1290-201ENST00000408735 78 ntBASIC2.28□□□□□ -2.04
BRCA1P38398 AL513331.1-201ENST00000411908 397 ntBASIC2.28□□□□□ -2.04
BRCA1P38398 AC013262.1-201ENST00000426710 252 ntBASIC2.28□□□□□ -2.04
BRCA1P38398 AC079780.1-201ENST00000428259 207 ntBASIC2.28□□□□□ -2.04
BRCA1P38398 ATP5F1P1-201ENST00000433775 569 ntBASIC2.28□□□□□ -2.04
BRCA1P38398 ARF4P4-201ENST00000439608 520 ntBASIC2.28□□□□□ -2.04
BRCA1P38398 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.28□□□□□ -2.04
BRCA1P38398 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC2.28□□□□□ -2.04
BRCA1P38398 ARL4AP2-201ENST00000507378 601 ntBASIC2.28□□□□□ -2.04
BRCA1P38398 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
BRCA1P38398 DEFB130C-202ENST00000530001 230 ntBASIC2.28□□□□□ -2.04
BRCA1P38398 AC005832.3-201ENST00000537929 631 ntBASIC2.28□□□□□ -2.04
BRCA1P38398 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
BRCA1P38398 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC2.28□□□□□ -2.04
BRCA1P38398 AL590099.1-201ENST00000615276 138 ntBASIC2.28□□□□□ -2.04
BRCA1P38398 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.28□□□□□ -2.04
BRCA1P38398 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
BRCA1P38398 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
BRCA1P38398 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.28□□□□□ -2.04
BRCA1P38398 RNY1P14-201ENST00000384426 108 ntBASIC2.28□□□□□ -2.04
BRCA1P38398 MIR1323-201ENST00000408090 73 ntBASIC2.28□□□□□ -2.04
BRCA1P38398 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.28□□□□□ -2.04
BRCA1P38398 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC2.28□□□□□ -2.04
BRCA1P38398 AL365496.1-201ENST00000426885 215 ntBASIC2.28□□□□□ -2.04
BRCA1P38398 RPS20P20-201ENST00000460498 340 ntBASIC2.28□□□□□ -2.04
BRCA1P38398 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC2.28□□□□□ -2.04
BRCA1P38398 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC2.28□□□□□ -2.04
BRCA1P38398 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.28□□□□□ -2.04
BRCA1P38398 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC2.28□□□□□ -2.04
BRCA1P38398 AC011260.1-201ENST00000578420 472 ntBASIC2.28□□□□□ -2.04
BRCA1P38398 VN1R87P-201ENST00000596706 487 ntBASIC2.28□□□□□ -2.04
BRCA1P38398 AC069545.1-201ENST00000605671 358 ntBASIC2.28□□□□□ -2.04
BRCA1P38398 AC002550.2-201ENST00000621246 394 ntBASIC2.28□□□□□ -2.04
BRCA1P38398 AC120349.2-201ENST00000625002 298 ntBASIC2.28□□□□□ -2.04
BRCA1P38398 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.28□□□□□ -2.04
BRCA1P38398 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC2.27□□□□□ -2.05
BRCA1P38398 Y_RNA.191-201ENST00000363972 113 ntBASIC2.27□□□□□ -2.05
BRCA1P38398 snoZ40.1-201ENST00000364540 72 ntBASIC2.27□□□□□ -2.05
BRCA1P38398 RNU6-392P-201ENST00000364926 101 ntBASIC2.27□□□□□ -2.05
BRCA1P38398 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC2.27□□□□□ -2.05
BRCA1P38398 AC004965.1-201ENST00000413033 213 ntBASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms