Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 AC104237.2-201ENST00000612456 443 ntBASIC2.43□□□□□ -2.02
RORAP35398 AC009268.2-201ENST00000621925 457 ntBASIC2.43□□□□□ -2.02
RORAP35398 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC2.43□□□□□ -2.02
RORAP35398 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC2.43□□□□□ -2.02
RORAP35398 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC2.43□□□□□ -2.02
RORAP35398 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.43□□□□□ -2.02
RORAP35398 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.43□□□□□ -2.02
RORAP35398 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.42□□□□□ -2.02
RORAP35398 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.42□□□□□ -2.02
RORAP35398 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.42□□□□□ -2.02
RORAP35398 SNORA38-201ENST00000363946 132 ntBASIC2.42□□□□□ -2.02
RORAP35398 MIR518C-201ENST00000384822 101 ntBASIC2.42□□□□□ -2.02
RORAP35398 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
RORAP35398 USP9YP20-201ENST00000419224 558 ntBASIC2.42□□□□□ -2.02
RORAP35398 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC2.42□□□□□ -2.02
RORAP35398 MYL8P-204ENST00000431574 518 ntBASIC2.42□□□□□ -2.02
RORAP35398 RSU1P2-202ENST00000437884 485 ntBASIC2.42□□□□□ -2.02
RORAP35398 SDR42E1P3-201ENST00000438345 502 ntBASIC2.42□□□□□ -2.02
RORAP35398 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
RORAP35398 BMI1P1-201ENST00000445879 941 ntBASIC2.42□□□□□ -2.02
RORAP35398 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC2.42□□□□□ -2.02
RORAP35398 ATG12P2-201ENST00000456830 416 ntBASIC2.42□□□□□ -2.02
RORAP35398 RNU7-26P-201ENST00000458980 63 ntBASIC2.42□□□□□ -2.02
RORAP35398 AC133134.1-201ENST00000466800 359 ntBASIC2.42□□□□□ -2.02
RORAP35398 RBM43P1-201ENST00000476891 1081 ntBASIC2.42□□□□□ -2.02
RORAP35398 AC126182.1-201ENST00000478134 357 ntBASIC2.42□□□□□ -2.02
RORAP35398 SRIP1-201ENST00000489235 288 ntBASIC2.42□□□□□ -2.02
RORAP35398 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC2.42□□□□□ -2.02
RORAP35398 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC2.42□□□□□ -2.02
RORAP35398 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.42□□□□□ -2.02
RORAP35398 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC2.42□□□□□ -2.02
RORAP35398 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.42□□□□□ -2.02
RORAP35398 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC2.42□□□□□ -2.02
RORAP35398 AC112220.3-201ENST00000605502 502 ntBASIC2.42□□□□□ -2.02
RORAP35398 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC2.42□□□□□ -2.02
RORAP35398 AC107294.1-201ENST00000609524 467 ntBASIC2.42□□□□□ -2.02
RORAP35398 CTSLP2-204ENST00000629029 392 ntBASIC2.42□□□□□ -2.02
RORAP35398 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC2.42□□□□□ -2.02
RORAP35398 AC022336.2-201ENST00000568966 2538 ntBASIC2.42□□□□□ -2.02
RORAP35398 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
RORAP35398 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
RORAP35398 DDX10P1-201ENST00000448545 1933 ntBASIC2.41□□□□□ -2.02
RORAP35398 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC2.41□□□□□ -2.02
RORAP35398 RNU6-741P-201ENST00000383889 107 ntBASIC2.41□□□□□ -2.02
RORAP35398 RNU6-1072P-201ENST00000384703 107 ntBASIC2.41□□□□□ -2.02
RORAP35398 RNU6-443P-201ENST00000384780 107 ntBASIC2.41□□□□□ -2.02
RORAP35398 ANAPC10P1-201ENST00000395991 556 ntBASIC2.41□□□□□ -2.02
RORAP35398 RNA5SP181-201ENST00000410246 98 ntBASIC2.41□□□□□ -2.02
RORAP35398 PIGPP2-201ENST00000411569 458 ntBASIC2.41□□□□□ -2.02
RORAP35398 AC106883.1-201ENST00000418805 562 ntBASIC2.41□□□□□ -2.02
RORAP35398 Z80107.1-201ENST00000436830 412 ntBASIC2.41□□□□□ -2.02
RORAP35398 BNIP3P2-201ENST00000441221 577 ntBASIC2.41□□□□□ -2.02
RORAP35398 CBWD4P-201ENST00000445695 655 ntBASIC2.41□□□□□ -2.02
RORAP35398 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC2.41□□□□□ -2.02
RORAP35398 AP000542.1-201ENST00000448473 371 ntBASIC2.41□□□□□ -2.02
RORAP35398 PAXBP1P1-201ENST00000449315 447 ntBASIC2.41□□□□□ -2.02
RORAP35398 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC2.41□□□□□ -2.02
RORAP35398 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC2.41□□□□□ -2.02
RORAP35398 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC2.41□□□□□ -2.02
RORAP35398 RPL7P18-201ENST00000478965 734 ntBASIC2.41□□□□□ -2.02
RORAP35398 EIF4EP3-201ENST00000498782 656 ntBASIC2.41□□□□□ -2.02
RORAP35398 RN7SKP24-201ENST00000515888 284 ntBASIC2.41□□□□□ -2.02
RORAP35398 SNORA31.11-201ENST00000516528 139 ntBASIC2.41□□□□□ -2.02
RORAP35398 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC2.41□□□□□ -2.02
RORAP35398 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC2.41□□□□□ -2.02
RORAP35398 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
RORAP35398 AC091544.4-201ENST00000555268 342 ntBASIC2.41□□□□□ -2.02
RORAP35398 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC2.41□□□□□ -2.02
RORAP35398 AL596327.1-201ENST00000603629 213 ntBASIC2.41□□□□□ -2.02
RORAP35398 AC007621.1-201ENST00000604544 437 ntBASIC2.41□□□□□ -2.02
RORAP35398 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC2.41□□□□□ -2.02
RORAP35398 U4.3-201ENST00000621047 82 ntBASIC2.41□□□□□ -2.02
RORAP35398 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC2.41□□□□□ -2.02
RORAP35398 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC2.41□□□□□ -2.02
RORAP35398 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
RORAP35398 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
RORAP35398 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
RORAP35398 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
RORAP35398 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.4□□□□□ -2.02
RORAP35398 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.4□□□□□ -2.02
RORAP35398 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
RORAP35398 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
RORAP35398 SNORA23-201ENST00000365128 182 ntBASIC2.4□□□□□ -2.03
RORAP35398 MIR144-201ENST00000384886 86 ntBASIC2.4□□□□□ -2.03
RORAP35398 MIR524-201ENST00000385242 87 ntBASIC2.4□□□□□ -2.03
RORAP35398 RNA5SP210-201ENST00000391034 120 ntBASIC2.4□□□□□ -2.03
RORAP35398 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC2.4□□□□□ -2.03
RORAP35398 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.4□□□□□ -2.03
RORAP35398 AL445669.1-201ENST00000426743 755 ntBASIC2.4□□□□□ -2.03
RORAP35398 Z82210.1-201ENST00000440037 231 ntBASIC2.4□□□□□ -2.03
RORAP35398 DDX3P2-201ENST00000446138 111 ntBASIC2.4□□□□□ -2.03
RORAP35398 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC2.4□□□□□ -2.03
RORAP35398 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.03
RORAP35398 CACYBPP2-201ENST00000453625 678 ntBASIC2.4□□□□□ -2.03
RORAP35398 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC2.4□□□□□ -2.03
RORAP35398 AC090096.1-201ENST00000489168 390 ntBASIC2.4□□□□□ -2.03
RORAP35398 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.4□□□□□ -2.03
RORAP35398 RNA5SP402-201ENST00000517148 110 ntBASIC2.4□□□□□ -2.03
RORAP35398 NRON-201ENST00000517270 370 ntBASIC2.4□□□□□ -2.03
RORAP35398 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC2.4□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 92.2 ms