Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 MIR217-201ENST00000384817 110 ntBASIC1.94□□□□□ -2.1
COL5A1P20908 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC1.94□□□□□ -2.1
COL5A1P20908 AL133384.1-201ENST00000412744 351 ntBASIC1.94□□□□□ -2.1
COL5A1P20908 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC1.94□□□□□ -2.1
COL5A1P20908 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC1.94□□□□□ -2.1
COL5A1P20908 GTF2IP7-202ENST00000436677 309 ntBASIC1.94□□□□□ -2.1
COL5A1P20908 MTCYBP34-201ENST00000439552 670 ntBASIC1.94□□□□□ -2.1
COL5A1P20908 AC092393.1-201ENST00000439625 742 ntBASIC1.94□□□□□ -2.1
COL5A1P20908 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC1.94□□□□□ -2.1
COL5A1P20908 ART2BP-201ENST00000453501 499 ntBASIC1.94□□□□□ -2.1
COL5A1P20908 AL163540.1-201ENST00000485382 386 ntBASIC1.94□□□□□ -2.1
COL5A1P20908 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC1.94□□□□□ -2.1
COL5A1P20908 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC1.94□□□□□ -2.1
COL5A1P20908 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC1.94□□□□□ -2.1
COL5A1P20908 RNU6-759P-201ENST00000516740 103 ntBASIC1.94□□□□□ -2.1
COL5A1P20908 AC087808.1-201ENST00000520501 361 ntBASIC1.94□□□□□ -2.1
COL5A1P20908 CA1-215ENST00000522389 551 ntTSL 3 BASIC1.94□□□□□ -2.1
COL5A1P20908 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC1.94□□□□□ -2.1
COL5A1P20908 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC1.94□□□□□ -2.1
COL5A1P20908 CASP1-212ENST00000531166 300 ntTSL 5 BASIC1.94□□□□□ -2.1
COL5A1P20908 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC1.94□□□□□ -2.1
COL5A1P20908 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC1.94□□□□□ -2.1
COL5A1P20908 AC110588.1-201ENST00000559699 137 ntBASIC1.94□□□□□ -2.1
COL5A1P20908 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC1.94□□□□□ -2.1
COL5A1P20908 DUXAP11-201ENST00000603858 526 ntBASIC1.94□□□□□ -2.1
COL5A1P20908 AC091946.2-201ENST00000606105 291 ntBASIC1.94□□□□□ -2.1
COL5A1P20908 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
COL5A1P20908 AC092650.2-201ENST00000619984 902 ntBASIC1.94□□□□□ -2.1
COL5A1P20908 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC1.94□□□□□ -2.1
COL5A1P20908 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
COL5A1P20908 ZNF876P-202ENST00000398732 1485 ntBASIC1.94□□□□□ -2.1
COL5A1P20908 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
COL5A1P20908 AC087359.1-201ENST00000508335 1740 ntBASIC1.94□□□□□ -2.1
COL5A1P20908 SNRPEP3-201ENST00000338402 276 ntBASIC1.94□□□□□ -2.1
COL5A1P20908 Y_RNA.77-201ENST00000362962 107 ntBASIC1.94□□□□□ -2.1
COL5A1P20908 Y_RNA.318-201ENST00000365131 97 ntBASIC1.94□□□□□ -2.1
COL5A1P20908 MIR153-1-201ENST00000384914 90 ntBASIC1.94□□□□□ -2.1
COL5A1P20908 RPL21P75-201ENST00000396599 483 ntBASIC1.94□□□□□ -2.1
COL5A1P20908 RPL21P1-201ENST00000399532 476 ntBASIC1.94□□□□□ -2.1
COL5A1P20908 RPL21P28-201ENST00000401418 483 ntBASIC1.94□□□□□ -2.1
COL5A1P20908 AL592114.1-201ENST00000403842 483 ntBASIC1.94□□□□□ -2.1
COL5A1P20908 U3.37-201ENST00000408528 213 ntBASIC1.94□□□□□ -2.1
COL5A1P20908 AP1B1P2-201ENST00000416196 106 ntBASIC1.94□□□□□ -2.1
COL5A1P20908 FNDC3CP-201ENST00000420795 1155 ntBASIC1.94□□□□□ -2.1
COL5A1P20908 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC1.94□□□□□ -2.1
COL5A1P20908 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC1.94□□□□□ -2.1
COL5A1P20908 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC1.94□□□□□ -2.1
COL5A1P20908 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC1.94□□□□□ -2.1
COL5A1P20908 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC1.94□□□□□ -2.1
COL5A1P20908 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.94□□□□□ -2.1
COL5A1P20908 MTND3P1-201ENST00000441336 220 ntBASIC1.94□□□□□ -2.1
COL5A1P20908 MTND2P4-201ENST00000445034 1004 ntBASIC1.94□□□□□ -2.1
COL5A1P20908 MTND1P29-201ENST00000448112 647 ntBASIC1.94□□□□□ -2.1
COL5A1P20908 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
COL5A1P20908 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC1.94□□□□□ -2.1
COL5A1P20908 AC073901.1-201ENST00000462471 408 ntBASIC1.94□□□□□ -2.1
COL5A1P20908 AC090515.1-201ENST00000465295 476 ntBASIC1.94□□□□□ -2.1
COL5A1P20908 RPL21P16-201ENST00000495531 483 ntBASIC1.94□□□□□ -2.1
COL5A1P20908 GZMAP1-201ENST00000503054 631 ntBASIC1.94□□□□□ -2.1
COL5A1P20908 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC1.94□□□□□ -2.1
COL5A1P20908 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC1.94□□□□□ -2.1
COL5A1P20908 AC011352.3-201ENST00000505162 593 ntBASIC1.94□□□□□ -2.1
COL5A1P20908 AC092436.3-201ENST00000511788 257 ntBASIC1.94□□□□□ -2.1
COL5A1P20908 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC1.94□□□□□ -2.1
COL5A1P20908 NBR2-204ENST00000587322 63 ntBASIC1.94□□□□□ -2.1
COL5A1P20908 AC135507.1-201ENST00000607214 561 ntBASIC1.94□□□□□ -2.1
COL5A1P20908 AC245008.1-201ENST00000608123 476 ntBASIC1.94□□□□□ -2.1
COL5A1P20908 Z69908.1-201ENST00000622603 247 ntBASIC1.94□□□□□ -2.1
COL5A1P20908 AC068620.4-201ENST00000636730 1182 ntBASIC1.94□□□□□ -2.1
COL5A1P20908 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC1.93□□□□□ -2.1
COL5A1P20908 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.93□□□□□ -2.1
COL5A1P20908 ZNF37BP-203ENST00000452306 1352 ntBASIC1.93□□□□□ -2.1
COL5A1P20908 ZNF720P1-201ENST00000562403 1939 ntBASIC1.93□□□□□ -2.1
COL5A1P20908 SNORD65.1-201ENST00000390889 71 ntBASIC1.93□□□□□ -2.1
COL5A1P20908 AL133264.1-201ENST00000407157 562 ntBASIC1.93□□□□□ -2.1
COL5A1P20908 RNU6-272P-201ENST00000411028 104 ntBASIC1.93□□□□□ -2.1
COL5A1P20908 USP9YP6-201ENST00000413550 854 ntBASIC1.93□□□□□ -2.1
COL5A1P20908 AL161449.1-201ENST00000414531 1199 ntBASIC1.93□□□□□ -2.1
COL5A1P20908 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC1.93□□□□□ -2.1
COL5A1P20908 TIMM9P2-201ENST00000419324 266 ntBASIC1.93□□□□□ -2.1
COL5A1P20908 SEPT2P1-201ENST00000419651 180 ntBASIC1.93□□□□□ -2.1
COL5A1P20908 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC1.93□□□□□ -2.1
COL5A1P20908 AC019178.2-201ENST00000423595 505 ntBASIC1.93□□□□□ -2.1
COL5A1P20908 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC1.93□□□□□ -2.1
COL5A1P20908 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC1.93□□□□□ -2.1
COL5A1P20908 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC1.93□□□□□ -2.1
COL5A1P20908 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC1.93□□□□□ -2.1
COL5A1P20908 FABP5P13-201ENST00000452144 328 ntBASIC1.93□□□□□ -2.1
COL5A1P20908 USP9YP34-201ENST00000453983 808 ntBASIC1.93□□□□□ -2.1
COL5A1P20908 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC1.93□□□□□ -2.1
COL5A1P20908 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC1.93□□□□□ -2.1
COL5A1P20908 AC146507.1-201ENST00000468335 354 ntBASIC1.93□□□□□ -2.1
COL5A1P20908 AC104689.1-201ENST00000473356 768 ntBASIC1.93□□□□□ -2.1
COL5A1P20908 RPL7P18-201ENST00000478965 734 ntBASIC1.93□□□□□ -2.1
COL5A1P20908 AC055855.1-201ENST00000489563 579 ntBASIC1.93□□□□□ -2.1
COL5A1P20908 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC1.93□□□□□ -2.1
COL5A1P20908 MTND5P13-201ENST00000513046 1079 ntBASIC1.93□□□□□ -2.1
COL5A1P20908 AC023632.1-201ENST00000518463 375 ntBASIC1.93□□□□□ -2.1
COL5A1P20908 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC1.93□□□□□ -2.1
COL5A1P20908 SLC2A13P1-201ENST00000531560 322 ntBASIC1.93□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 135.6 ms