Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 Y_RNA.255-201ENST00000364581 97 ntBASIC3.11□□□□□ -1.91
HLA-DOBP13765 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.11□□□□□ -1.91
HLA-DOBP13765 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
HLA-DOBP13765 Y_RNA.390-201ENST00000383932 102 ntBASIC3.11□□□□□ -1.91
HLA-DOBP13765 SNORA36C-201ENST00000384289 132 ntBASIC3.11□□□□□ -1.91
HLA-DOBP13765 MIR607-201ENST00000385241 96 ntBASIC3.11□□□□□ -1.91
HLA-DOBP13765 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
HLA-DOBP13765 AL591416.1-201ENST00000404015 867 ntBASIC3.11□□□□□ -1.91
HLA-DOBP13765 NDUFS5P1-201ENST00000405668 289 ntBASIC3.11□□□□□ -1.91
HLA-DOBP13765 MIR1183-201ENST00000408856 89 ntBASIC3.11□□□□□ -1.91
HLA-DOBP13765 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.11□□□□□ -1.91
HLA-DOBP13765 CRYBB2P1-203ENST00000415709 538 ntBASIC3.11□□□□□ -1.91
HLA-DOBP13765 AC008850.1-201ENST00000427546 362 ntBASIC3.11□□□□□ -1.91
HLA-DOBP13765 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC3.11□□□□□ -1.91
HLA-DOBP13765 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC3.11□□□□□ -1.91
HLA-DOBP13765 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.11□□□□□ -1.91
HLA-DOBP13765 AL133547.1-201ENST00000448546 220 ntBASIC3.11□□□□□ -1.91
HLA-DOBP13765 MRPS31P2-201ENST00000451581 518 ntBASIC3.11□□□□□ -1.91
HLA-DOBP13765 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC3.11□□□□□ -1.91
HLA-DOBP13765 CACYBPP2-201ENST00000453625 678 ntBASIC3.11□□□□□ -1.91
HLA-DOBP13765 SNRPGP5-201ENST00000456003 220 ntBASIC3.11□□□□□ -1.91
HLA-DOBP13765 RPL23AP31-201ENST00000456160 467 ntBASIC3.11□□□□□ -1.91
HLA-DOBP13765 SNORD105B-201ENST00000458770 79 ntBASIC3.11□□□□□ -1.91
HLA-DOBP13765 HSPE1P6-201ENST00000479457 291 ntBASIC3.11□□□□□ -1.91
HLA-DOBP13765 AC233702.1-201ENST00000482905 502 ntBASIC3.11□□□□□ -1.91
HLA-DOBP13765 RPL31P13-201ENST00000484151 370 ntBASIC3.11□□□□□ -1.91
HLA-DOBP13765 AC106707.2-201ENST00000484182 374 ntBASIC3.11□□□□□ -1.91
HLA-DOBP13765 AL163973.1-201ENST00000484753 577 ntBASIC3.11□□□□□ -1.91
HLA-DOBP13765 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.11□□□□□ -1.91
HLA-DOBP13765 AC005921.1-201ENST00000510589 286 ntBASIC3.11□□□□□ -1.91
HLA-DOBP13765 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
HLA-DOBP13765 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.11□□□□□ -1.91
HLA-DOBP13765 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.11□□□□□ -1.91
HLA-DOBP13765 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
HLA-DOBP13765 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC3.11□□□□□ -1.91
HLA-DOBP13765 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.11□□□□□ -1.91
HLA-DOBP13765 AC034105.4-201ENST00000568304 277 ntBASIC3.11□□□□□ -1.91
HLA-DOBP13765 RPL23AP84-201ENST00000571193 464 ntBASIC3.11□□□□□ -1.91
HLA-DOBP13765 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.11□□□□□ -1.91
HLA-DOBP13765 MIR4775-201ENST00000581168 75 ntBASIC3.11□□□□□ -1.91
HLA-DOBP13765 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC3.11□□□□□ -1.91
HLA-DOBP13765 BDH2P1-201ENST00000602288 736 ntBASIC3.11□□□□□ -1.91
HLA-DOBP13765 DISC2.1-201ENST00000612827 205 ntBASIC3.11□□□□□ -1.91
HLA-DOBP13765 AC024940.5-201ENST00000622889 474 ntBASIC3.11□□□□□ -1.91
HLA-DOBP13765 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.11□□□□□ -1.91
HLA-DOBP13765 MIR3662-201ENST00000637030 95 ntBASIC3.11□□□□□ -1.91
HLA-DOBP13765 ATM-228ENST00000639240 498 ntTSL 5 BASIC3.11□□□□□ -1.91
HLA-DOBP13765 ATM-230ENST00000640388 578 ntTSL 5 BASIC3.11□□□□□ -1.91
HLA-DOBP13765 AC009093.8-201ENST00000641769 292 ntBASIC3.11□□□□□ -1.91
HLA-DOBP13765 AC116096.1-201ENST00000566804 2314 ntBASIC3.11□□□□□ -1.91
HLA-DOBP13765 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
HLA-DOBP13765 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.11□□□□□ -1.91
HLA-DOBP13765 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.11□□□□□ -1.91
HLA-DOBP13765 AC004972.1-201ENST00000623934 2209 ntBASIC3.11□□□□□ -1.91
HLA-DOBP13765 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.11□□□□□ -1.91
HLA-DOBP13765 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
HLA-DOBP13765 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
HLA-DOBP13765 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.1□□□□□ -1.91
HLA-DOBP13765 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
HLA-DOBP13765 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
HLA-DOBP13765 SNORA51.2-201ENST00000364595 132 ntBASIC3.1□□□□□ -1.91
HLA-DOBP13765 RNA5SP189-201ENST00000364920 115 ntBASIC3.1□□□□□ -1.91
HLA-DOBP13765 RNA5SP167-201ENST00000365461 116 ntBASIC3.1□□□□□ -1.91
HLA-DOBP13765 SMIM11P1-201ENST00000369586 178 ntBASIC3.1□□□□□ -1.91
HLA-DOBP13765 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.1□□□□□ -1.91
HLA-DOBP13765 AL354719.1-201ENST00000406535 843 ntBASIC3.1□□□□□ -1.91
HLA-DOBP13765 RNU6-387P-201ENST00000411331 105 ntBASIC3.1□□□□□ -1.91
HLA-DOBP13765 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC3.1□□□□□ -1.91
HLA-DOBP13765 CYCSP4-201ENST00000429682 331 ntBASIC3.1□□□□□ -1.91
HLA-DOBP13765 ATP5JP1-201ENST00000431631 322 ntBASIC3.1□□□□□ -1.91
HLA-DOBP13765 GOT2P5-201ENST00000433995 546 ntBASIC3.1□□□□□ -1.91
HLA-DOBP13765 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC3.1□□□□□ -1.91
HLA-DOBP13765 AL357552.1-201ENST00000445254 415 ntBASIC3.1□□□□□ -1.91
HLA-DOBP13765 AC020550.1-201ENST00000447385 163 ntBASIC3.1□□□□□ -1.91
HLA-DOBP13765 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC3.1□□□□□ -1.91
HLA-DOBP13765 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.1□□□□□ -1.91
HLA-DOBP13765 AC025518.1-201ENST00000479856 347 ntBASIC3.1□□□□□ -1.91
HLA-DOBP13765 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC3.1□□□□□ -1.91
HLA-DOBP13765 NAF1-205ENST00000509434 385 ntTSL 3 BASIC3.1□□□□□ -1.91
HLA-DOBP13765 SNORD60.2-201ENST00000516883 86 ntBASIC3.1□□□□□ -1.91
HLA-DOBP13765 RNU6-1073P-201ENST00000517182 106 ntBASIC3.1□□□□□ -1.91
HLA-DOBP13765 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.1□□□□□ -1.91
HLA-DOBP13765 OR5AL2P-201ENST00000532185 920 ntBASIC3.1□□□□□ -1.91
HLA-DOBP13765 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC3.1□□□□□ -1.91
HLA-DOBP13765 AL355836.1-201ENST00000555951 870 ntBASIC3.1□□□□□ -1.91
HLA-DOBP13765 AP005205.1-201ENST00000563503 508 ntBASIC3.1□□□□□ -1.91
HLA-DOBP13765 AC006270.2-201ENST00000578523 652 ntBASIC3.1□□□□□ -1.91
HLA-DOBP13765 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.1□□□□□ -1.91
HLA-DOBP13765 AC024619.4-201ENST00000580924 316 ntBASIC3.1□□□□□ -1.91
HLA-DOBP13765 MIR3922-201ENST00000585192 84 ntBASIC3.1□□□□□ -1.91
HLA-DOBP13765 AC174048.1-201ENST00000603389 144 ntBASIC3.1□□□□□ -1.91
HLA-DOBP13765 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC3.1□□□□□ -1.91
HLA-DOBP13765 AL355810.1-201ENST00000614629 552 ntBASIC3.1□□□□□ -1.91
HLA-DOBP13765 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC3.1□□□□□ -1.91
HLA-DOBP13765 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC3.1□□□□□ -1.91
HLA-DOBP13765 AL713922.2-201ENST00000619384 716 ntBASIC3.1□□□□□ -1.91
HLA-DOBP13765 AL589994.2-201ENST00000621124 579 ntBASIC3.1□□□□□ -1.91
HLA-DOBP13765 AC007998.5-201ENST00000622938 237 ntBASIC3.1□□□□□ -1.91
HLA-DOBP13765 AC025034.2-201ENST00000623264 286 ntBASIC3.1□□□□□ -1.91
HLA-DOBP13765 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 144.2 ms