Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC3.07□□□□□ -1.92
VTNP04004 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
VTNP04004 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.07□□□□□ -1.92
VTNP04004 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC3.07□□□□□ -1.92
VTNP04004 AC245166.1-201ENST00000521012 253 ntBASIC3.07□□□□□ -1.92
VTNP04004 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.07□□□□□ -1.92
VTNP04004 HMGN1P28-201ENST00000521340 364 ntBASIC3.07□□□□□ -1.92
VTNP04004 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC3.07□□□□□ -1.92
VTNP04004 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC3.07□□□□□ -1.92
VTNP04004 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC3.07□□□□□ -1.92
VTNP04004 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.07□□□□□ -1.92
VTNP04004 AC012213.3-201ENST00000577199 777 ntBASIC3.07□□□□□ -1.92
VTNP04004 MTND1P15-201ENST00000579262 949 ntBASIC3.07□□□□□ -1.92
VTNP04004 HMGN1P30-201ENST00000589286 268 ntBASIC3.07□□□□□ -1.92
VTNP04004 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.07□□□□□ -1.92
VTNP04004 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.07□□□□□ -1.92
VTNP04004 NRBF2P5-201ENST00000603087 788 ntBASIC3.07□□□□□ -1.92
VTNP04004 AC012443.1-201ENST00000605605 231 ntBASIC3.07□□□□□ -1.92
VTNP04004 AC098614.4-201ENST00000607601 462 ntBASIC3.07□□□□□ -1.92
VTNP04004 AC007038.2-201ENST00000608095 740 ntBASIC3.07□□□□□ -1.92
VTNP04004 AC138749.5-201ENST00000611461 208 ntBASIC3.07□□□□□ -1.92
VTNP04004 AL450472.3-201ENST00000615578 367 ntBASIC3.07□□□□□ -1.92
VTNP04004 AC116165.2-201ENST00000616705 206 ntBASIC3.07□□□□□ -1.92
VTNP04004 AC108479.2-201ENST00000617314 601 ntBASIC3.07□□□□□ -1.92
VTNP04004 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC3.07□□□□□ -1.92
VTNP04004 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
VTNP04004 AC093010.3-201ENST00000570269 15214 ntBASIC3.07□□□□□ -1.92
VTNP04004 AC007256.1-201ENST00000392253 2765 ntBASIC3.07□□□□□ -1.92
VTNP04004 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
VTNP04004 TAB3P1-202ENST00000452645 1634 ntBASIC3.07□□□□□ -1.92
VTNP04004 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
VTNP04004 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.06□□□□□ -1.92
VTNP04004 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.06□□□□□ -1.92
VTNP04004 MIR148B-201ENST00000362252 99 ntBASIC3.06□□□□□ -1.92
VTNP04004 RNU6-623P-201ENST00000363143 105 ntBASIC3.06□□□□□ -1.92
VTNP04004 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC3.06□□□□□ -1.92
VTNP04004 SNORA75-201ENST00000384158 137 ntBASIC3.06□□□□□ -1.92
VTNP04004 RNU6-297P-201ENST00000384636 107 ntBASIC3.06□□□□□ -1.92
VTNP04004 RNU6-278P-201ENST00000390945 109 ntBASIC3.06□□□□□ -1.92
VTNP04004 RN7SKP58-201ENST00000411010 305 ntBASIC3.06□□□□□ -1.92
VTNP04004 RPS3AP3-201ENST00000411933 242 ntBASIC3.06□□□□□ -1.92
VTNP04004 CDK8P2-201ENST00000415020 547 ntBASIC3.06□□□□□ -1.92
VTNP04004 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.06□□□□□ -1.92
VTNP04004 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.06□□□□□ -1.92
VTNP04004 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.06□□□□□ -1.92
VTNP04004 AC019097.1-201ENST00000424783 735 ntBASIC3.06□□□□□ -1.92
VTNP04004 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.06□□□□□ -1.92
VTNP04004 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.06□□□□□ -1.92
VTNP04004 AL592447.1-201ENST00000447592 540 ntBASIC3.06□□□□□ -1.92
VTNP04004 SSXP4-201ENST00000451349 245 ntBASIC3.06□□□□□ -1.92
VTNP04004 RPS27AP1-201ENST00000475545 471 ntBASIC3.06□□□□□ -1.92
VTNP04004 RN7SL432P-201ENST00000484057 298 ntBASIC3.06□□□□□ -1.92
VTNP04004 RPL23AP41-201ENST00000484754 458 ntBASIC3.06□□□□□ -1.92
VTNP04004 LARP1BP2-201ENST00000486594 519 ntBASIC3.06□□□□□ -1.92
VTNP04004 AC135721.1-201ENST00000497954 479 ntBASIC3.06□□□□□ -1.92
VTNP04004 AC114797.1-201ENST00000514003 728 ntBASIC3.06□□□□□ -1.92
VTNP04004 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC3.06□□□□□ -1.92
VTNP04004 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
VTNP04004 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.06□□□□□ -1.92
VTNP04004 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC3.06□□□□□ -1.92
VTNP04004 OR4T1P-201ENST00000554933 911 ntBASIC3.06□□□□□ -1.92
VTNP04004 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC3.06□□□□□ -1.92
VTNP04004 AC138915.3-201ENST00000562908 1389 ntBASIC3.06□□□□□ -1.92
VTNP04004 COX6CP3-201ENST00000580869 223 ntBASIC3.06□□□□□ -1.92
VTNP04004 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC3.06□□□□□ -1.92
VTNP04004 AC091152.2-201ENST00000591628 2569 ntBASIC3.06□□□□□ -1.92
VTNP04004 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.06□□□□□ -1.92
VTNP04004 RNU6-87P-201ENST00000607561 108 ntBASIC3.06□□□□□ -1.92
VTNP04004 AC131902.3-201ENST00000611767 581 ntBASIC3.06□□□□□ -1.92
VTNP04004 AC090970.3-201ENST00000612566 866 ntBASIC3.06□□□□□ -1.92
VTNP04004 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC3.06□□□□□ -1.92
VTNP04004 XIST_intron.1-201ENST00000619444 68 ntBASIC3.06□□□□□ -1.92
VTNP04004 AC009268.2-201ENST00000621925 457 ntBASIC3.06□□□□□ -1.92
VTNP04004 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.06□□□□□ -1.92
VTNP04004 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.05□□□□□ -1.92
VTNP04004 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.05□□□□□ -1.92
VTNP04004 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
VTNP04004 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.05□□□□□ -1.92
VTNP04004 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
VTNP04004 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
VTNP04004 AC009812.4-201ENST00000569134 1805 ntBASIC3.05□□□□□ -1.92
VTNP04004 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
VTNP04004 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.05□□□□□ -1.92
VTNP04004 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
VTNP04004 RNY4P16-201ENST00000364768 94 ntBASIC3.05□□□□□ -1.92
VTNP04004 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC3.05□□□□□ -1.92
VTNP04004 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
VTNP04004 SNORD115.1-201ENST00000391109 76 ntBASIC3.05□□□□□ -1.92
VTNP04004 RNU6-195P-201ENST00000411352 109 ntBASIC3.05□□□□□ -1.92
VTNP04004 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC3.05□□□□□ -1.92
VTNP04004 UBE2FP1-201ENST00000416536 447 ntBASIC3.05□□□□□ -1.92
VTNP04004 RPS15AP12-201ENST00000419498 388 ntBASIC3.05□□□□□ -1.92
VTNP04004 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC3.05□□□□□ -1.92
VTNP04004 ISCA1P6-201ENST00000427740 390 ntBASIC3.05□□□□□ -1.92
VTNP04004 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.05□□□□□ -1.92
VTNP04004 ARL5AP4-201ENST00000430731 512 ntBASIC3.05□□□□□ -1.92
VTNP04004 AL049734.2-201ENST00000441066 616 ntBASIC3.05□□□□□ -1.92
VTNP04004 AC244505.5-201ENST00000443639 207 ntBASIC3.05□□□□□ -1.92
VTNP04004 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC3.05□□□□□ -1.92
VTNP04004 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.05□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 164.6 ms