Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC1.95□□□□□ -2.1
UPK1BO75841 AL137003.2-201ENST00000606924 2538 ntBASIC1.95□□□□□ -2.1
UPK1BO75841 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
UPK1BO75841 RNU6-778P-201ENST00000363269 103 ntBASIC1.95□□□□□ -2.1
UPK1BO75841 SNORA38-201ENST00000363946 132 ntBASIC1.95□□□□□ -2.1
UPK1BO75841 RNA5SP160-201ENST00000364866 120 ntBASIC1.95□□□□□ -2.1
UPK1BO75841 RNU1-73P-201ENST00000383971 164 ntBASIC1.95□□□□□ -2.1
UPK1BO75841 MIR27B-201ENST00000385129 97 ntBASIC1.95□□□□□ -2.1
UPK1BO75841 AL139397.2-201ENST00000404529 772 ntBASIC1.95□□□□□ -2.1
UPK1BO75841 U3.40-201ENST00000408706 208 ntBASIC1.95□□□□□ -2.1
UPK1BO75841 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC1.95□□□□□ -2.1
UPK1BO75841 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC1.95□□□□□ -2.1
UPK1BO75841 RPL21P24-201ENST00000413752 448 ntBASIC1.95□□□□□ -2.1
UPK1BO75841 SEPT2P1-201ENST00000419651 180 ntBASIC1.95□□□□□ -2.1
UPK1BO75841 HMGB1P9-201ENST00000429856 646 ntBASIC1.95□□□□□ -2.1
UPK1BO75841 AL117351.1-201ENST00000438864 766 ntBASIC1.95□□□□□ -2.1
UPK1BO75841 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC1.95□□□□□ -2.1
UPK1BO75841 IFNA11P-201ENST00000446352 526 ntBASIC1.95□□□□□ -2.1
UPK1BO75841 RPL21P134-201ENST00000453468 483 ntBASIC1.95□□□□□ -2.1
UPK1BO75841 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC1.95□□□□□ -2.1
UPK1BO75841 AC116353.3-201ENST00000511215 249 ntBASIC1.95□□□□□ -2.1
UPK1BO75841 AC109445.1-201ENST00000512356 383 ntBASIC1.95□□□□□ -2.1
UPK1BO75841 RN7SKP157-201ENST00000516174 282 ntBASIC1.95□□□□□ -2.1
UPK1BO75841 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC1.95□□□□□ -2.1
UPK1BO75841 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC1.95□□□□□ -2.1
UPK1BO75841 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC1.95□□□□□ -2.1
UPK1BO75841 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC1.95□□□□□ -2.1
UPK1BO75841 AL020997.2-201ENST00000602607 184 ntBASIC1.95□□□□□ -2.1
UPK1BO75841 AC012468.1-201ENST00000604888 430 ntBASIC1.95□□□□□ -2.1
UPK1BO75841 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC1.95□□□□□ -2.1
UPK1BO75841 AC109809.1-201ENST00000619665 545 ntBASIC1.95□□□□□ -2.1
UPK1BO75841 AC034229.5-201ENST00000624258 185 ntBASIC1.95□□□□□ -2.1
UPK1BO75841 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC1.95□□□□□ -2.1
UPK1BO75841 U2.21-201ENST00000637295 81 ntBASIC1.95□□□□□ -2.1
UPK1BO75841 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC1.95□□□□□ -2.1
UPK1BO75841 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.95□□□□□ -2.1
UPK1BO75841 MTCO1P12-201ENST00000414273 1543 ntBASIC1.95□□□□□ -2.1
UPK1BO75841 ELF2P3-201ENST00000445099 1506 ntBASIC1.95□□□□□ -2.1
UPK1BO75841 KPNA2P1-201ENST00000458289 1591 ntBASIC1.94□□□□□ -2.1
UPK1BO75841 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.94□□□□□ -2.1
UPK1BO75841 RNA5SP68-201ENST00000363885 119 ntBASIC1.94□□□□□ -2.1
UPK1BO75841 RNU6-1083P-201ENST00000384022 107 ntBASIC1.94□□□□□ -2.1
UPK1BO75841 MIR320C1-201ENST00000408566 88 ntBASIC1.94□□□□□ -2.1
UPK1BO75841 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC1.94□□□□□ -2.1
UPK1BO75841 AC096649.2-201ENST00000416186 393 ntBASIC1.94□□□□□ -2.1
UPK1BO75841 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC1.94□□□□□ -2.1
UPK1BO75841 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
UPK1BO75841 EEF1A1P39-201ENST00000440791 250 ntBASIC1.94□□□□□ -2.1
UPK1BO75841 AL358794.1-201ENST00000445689 381 ntBASIC1.94□□□□□ -2.1
UPK1BO75841 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC1.94□□□□□ -2.1
UPK1BO75841 AC020550.1-201ENST00000447385 163 ntBASIC1.94□□□□□ -2.1
UPK1BO75841 MTCO1P27-201ENST00000448269 226 ntBASIC1.94□□□□□ -2.1
UPK1BO75841 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC1.94□□□□□ -2.1
UPK1BO75841 DYNLL1P5-201ENST00000467158 270 ntBASIC1.94□□□□□ -2.1
UPK1BO75841 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC1.94□□□□□ -2.1
UPK1BO75841 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC1.94□□□□□ -2.1
UPK1BO75841 WBP1LP4-201ENST00000505043 344 ntBASIC1.94□□□□□ -2.1
UPK1BO75841 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC1.94□□□□□ -2.1
UPK1BO75841 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC1.94□□□□□ -2.1
UPK1BO75841 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC1.94□□□□□ -2.1
UPK1BO75841 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC1.94□□□□□ -2.1
UPK1BO75841 AC026436.1-201ENST00000510537 270 ntBASIC1.94□□□□□ -2.1
UPK1BO75841 LTV1P1-201ENST00000510683 1237 ntBASIC1.94□□□□□ -2.1
UPK1BO75841 AC096725.1-201ENST00000514266 313 ntBASIC1.94□□□□□ -2.1
UPK1BO75841 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC1.94□□□□□ -2.1
UPK1BO75841 RNU6-927P-201ENST00000516199 100 ntBASIC1.94□□□□□ -2.1
UPK1BO75841 RNU1-103P-201ENST00000516502 125 ntBASIC1.94□□□□□ -2.1
UPK1BO75841 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC1.94□□□□□ -2.1
UPK1BO75841 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC1.94□□□□□ -2.1
UPK1BO75841 AC010186.2-204ENST00000537668 439 ntBASIC1.94□□□□□ -2.1
UPK1BO75841 AL133153.1-201ENST00000557756 303 ntBASIC1.94□□□□□ -2.1
UPK1BO75841 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC1.94□□□□□ -2.1
UPK1BO75841 AC023813.2-201ENST00000564321 469 ntBASIC1.94□□□□□ -2.1
UPK1BO75841 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC1.94□□□□□ -2.1
UPK1BO75841 AC025588.2-201ENST00000604851 466 ntBASIC1.94□□□□□ -2.1
UPK1BO75841 SNORD14A-201ENST00000606526 91 ntBASIC1.94□□□□□ -2.1
UPK1BO75841 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
UPK1BO75841 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC1.94□□□□□ -2.1
UPK1BO75841 AC107294.1-201ENST00000609524 467 ntBASIC1.94□□□□□ -2.1
UPK1BO75841 DUXAP9-208ENST00000622815 614 ntBASIC1.94□□□□□ -2.1
UPK1BO75841 AC004808.1-201ENST00000627671 721 ntBASIC1.94□□□□□ -2.1
UPK1BO75841 TEX41-300ENST00000631048 69 ntTSL 5 BASIC1.94□□□□□ -2.1
UPK1BO75841 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC1.94□□□□□ -2.1
UPK1BO75841 MIR3199-2-201ENST00000636243 86 ntBASIC1.94□□□□□ -2.1
UPK1BO75841 AC099654.8-201ENST00000637757 681 ntBASIC1.94□□□□□ -2.1
UPK1BO75841 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
UPK1BO75841 AC110491.1-201ENST00000562191 2010 ntBASIC1.94□□□□□ -2.1
UPK1BO75841 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC1.94□□□□□ -2.1
UPK1BO75841 MTND4P35-201ENST00000604257 1375 ntBASIC1.94□□□□□ -2.1
UPK1BO75841 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.94□□□□□ -2.1
UPK1BO75841 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
UPK1BO75841 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
UPK1BO75841 RNU6-1167P-201ENST00000363227 94 ntBASIC1.93□□□□□ -2.1
UPK1BO75841 Y_RNA.465-201ENST00000384293 102 ntBASIC1.93□□□□□ -2.1
UPK1BO75841 SUMO2P12-201ENST00000405924 140 ntBASIC1.93□□□□□ -2.1
UPK1BO75841 MTCO1P17-201ENST00000411522 491 ntBASIC1.93□□□□□ -2.1
UPK1BO75841 NDUFS5P4-201ENST00000412983 318 ntBASIC1.93□□□□□ -2.1
UPK1BO75841 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC1.93□□□□□ -2.1
UPK1BO75841 RPS3AP37-201ENST00000419176 745 ntBASIC1.93□□□□□ -2.1
UPK1BO75841 FCF1P1-201ENST00000432690 571 ntBASIC1.93□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 162.1 ms