Protein–RNA interactions for Protein: O75643

SNRNP200, U5 small nuclear ribonucleoprotein 200 kDa helicase, humanhuman

Known RBP Predictions only

Length 2,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200O75643 MIR1285-1-201ENST00000408593 84 ntBASIC1.3□□□□□ -2.2
SNRNP200O75643 BEND7P1-201ENST00000422058 457 ntBASIC1.3□□□□□ -2.2
SNRNP200O75643 RPS26P30-201ENST00000443431 335 ntBASIC1.3□□□□□ -2.2
SNRNP200O75643 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC1.3□□□□□ -2.2
SNRNP200O75643 SNRPGP6-201ENST00000451124 220 ntBASIC1.3□□□□□ -2.2
SNRNP200O75643 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
SNRNP200O75643 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC1.3□□□□□ -2.2
SNRNP200O75643 AC006390.1-201ENST00000508068 283 ntBASIC1.3□□□□□ -2.2
SNRNP200O75643 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC1.3□□□□□ -2.2
SNRNP200O75643 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC1.3□□□□□ -2.2
SNRNP200O75643 AC010546.1-201ENST00000569391 485 ntBASIC1.3□□□□□ -2.2
SNRNP200O75643 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC1.3□□□□□ -2.2
SNRNP200O75643 FAM60BP-201ENST00000578364 658 ntBASIC1.3□□□□□ -2.2
SNRNP200O75643 AC106052.1-201ENST00000608029 497 ntBASIC1.3□□□□□ -2.2
SNRNP200O75643 AC004852.3-201ENST00000614131 326 ntBASIC1.3□□□□□ -2.2
SNRNP200O75643 ZNF209P-201ENST00000593450 2304 ntBASIC1.3□□□□□ -2.2
SNRNP200O75643 MTCO1P18-201ENST00000455518 1419 ntBASIC1.3□□□□□ -2.2
SNRNP200O75643 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
SNRNP200O75643 AC008568.2-201ENST00000623862 2313 ntBASIC1.3□□□□□ -2.2
SNRNP200O75643 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
SNRNP200O75643 SNORA27.3-201ENST00000364937 134 ntBASIC1.3□□□□□ -2.2
SNRNP200O75643 RNU6-1005P-201ENST00000384519 107 ntBASIC1.3□□□□□ -2.2
SNRNP200O75643 SNORD56-201ENST00000413522 71 ntBASIC1.3□□□□□ -2.2
SNRNP200O75643 VN1R36P-201ENST00000414936 291 ntBASIC1.3□□□□□ -2.2
SNRNP200O75643 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC1.3□□□□□ -2.2
SNRNP200O75643 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC1.3□□□□□ -2.2
SNRNP200O75643 BMI1P1-201ENST00000445879 941 ntBASIC1.3□□□□□ -2.2
SNRNP200O75643 AC104073.1-201ENST00000451988 151 ntBASIC1.3□□□□□ -2.2
SNRNP200O75643 BZW1P2-201ENST00000473537 826 ntBASIC1.3□□□□□ -2.2
SNRNP200O75643 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.3□□□□□ -2.2
SNRNP200O75643 SSR3-208ENST00000496050 579 ntTSL 4 BASIC1.3□□□□□ -2.2
SNRNP200O75643 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC1.3□□□□□ -2.2
SNRNP200O75643 SNORA31.18-201ENST00000517043 134 ntBASIC1.3□□□□□ -2.2
SNRNP200O75643 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC1.3□□□□□ -2.2
SNRNP200O75643 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
SNRNP200O75643 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC1.3□□□□□ -2.2
SNRNP200O75643 MIR3660-201ENST00000584845 100 ntBASIC1.3□□□□□ -2.2
SNRNP200O75643 AC105224.1-201ENST00000587055 421 ntBASIC1.3□□□□□ -2.2
SNRNP200O75643 AC020658.4-201ENST00000613987 684 ntBASIC1.3□□□□□ -2.2
SNRNP200O75643 SEC63P2-201ENST00000503863 1939 ntBASIC1.3□□□□□ -2.2
SNRNP200O75643 RNA5SP125-201ENST00000364843 120 ntBASIC1.29□□□□□ -2.2
SNRNP200O75643 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC1.29□□□□□ -2.2
SNRNP200O75643 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
SNRNP200O75643 RPL23AP29-201ENST00000397284 453 ntBASIC1.29□□□□□ -2.2
SNRNP200O75643 AC079780.1-201ENST00000428259 207 ntBASIC1.29□□□□□ -2.2
SNRNP200O75643 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC1.29□□□□□ -2.2
SNRNP200O75643 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC1.29□□□□□ -2.2
SNRNP200O75643 SDCBPP1-201ENST00000440192 890 ntBASIC1.29□□□□□ -2.2
SNRNP200O75643 MTATP6P7-201ENST00000453315 681 ntBASIC1.29□□□□□ -2.2
SNRNP200O75643 MTCO1P42-201ENST00000457379 726 ntBASIC1.29□□□□□ -2.2
SNRNP200O75643 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC1.29□□□□□ -2.2
SNRNP200O75643 RPS29P23-201ENST00000458635 123 ntBASIC1.29□□□□□ -2.2
SNRNP200O75643 COX6CP14-201ENST00000469580 174 ntBASIC1.29□□□□□ -2.2
SNRNP200O75643 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC1.29□□□□□ -2.2
SNRNP200O75643 TRMT112P2-201ENST00000512910 132 ntBASIC1.29□□□□□ -2.2
SNRNP200O75643 SNORA31.23-201ENST00000517219 133 ntBASIC1.29□□□□□ -2.2
SNRNP200O75643 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC1.29□□□□□ -2.2
SNRNP200O75643 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC1.29□□□□□ -2.2
SNRNP200O75643 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC1.29□□□□□ -2.2
SNRNP200O75643 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.29□□□□□ -2.2
SNRNP200O75643 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC1.29□□□□□ -2.2
SNRNP200O75643 MIR4504-201ENST00000577413 92 ntBASIC1.29□□□□□ -2.2
SNRNP200O75643 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC1.29□□□□□ -2.2
SNRNP200O75643 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC1.29□□□□□ -2.2
SNRNP200O75643 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC1.29□□□□□ -2.2
SNRNP200O75643 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.29□□□□□ -2.2
SNRNP200O75643 AL670379.6-201ENST00000603753 252 ntBASIC1.29□□□□□ -2.2
SNRNP200O75643 AL670379.11-201ENST00000604059 253 ntBASIC1.29□□□□□ -2.2
SNRNP200O75643 AL670379.10-201ENST00000604330 253 ntBASIC1.29□□□□□ -2.2
SNRNP200O75643 DPRXP5-201ENST00000604662 539 ntBASIC1.29□□□□□ -2.2
SNRNP200O75643 AC008162.1-201ENST00000604718 254 ntBASIC1.29□□□□□ -2.2
SNRNP200O75643 AL670379.1-201ENST00000604752 252 ntBASIC1.29□□□□□ -2.2
SNRNP200O75643 AL670379.2-201ENST00000604983 252 ntBASIC1.29□□□□□ -2.2
SNRNP200O75643 AL670379.5-201ENST00000605253 252 ntBASIC1.29□□□□□ -2.2
SNRNP200O75643 AL670379.4-201ENST00000605279 254 ntBASIC1.29□□□□□ -2.2
SNRNP200O75643 AL670379.12-201ENST00000605291 253 ntBASIC1.29□□□□□ -2.2
SNRNP200O75643 AL670379.8-201ENST00000605353 252 ntBASIC1.29□□□□□ -2.2
SNRNP200O75643 AL670379.9-201ENST00000605428 253 ntBASIC1.29□□□□□ -2.2
SNRNP200O75643 AL670379.7-201ENST00000605823 252 ntBASIC1.29□□□□□ -2.2
SNRNP200O75643 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC1.29□□□□□ -2.2
SNRNP200O75643 MIR7157-201ENST00000635801 60 ntBASIC1.29□□□□□ -2.2
SNRNP200O75643 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
SNRNP200O75643 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
SNRNP200O75643 RNU6-339P-201ENST00000384310 107 ntBASIC1.28□□□□□ -2.2
SNRNP200O75643 AC004965.1-201ENST00000413033 213 ntBASIC1.28□□□□□ -2.2
SNRNP200O75643 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC1.28□□□□□ -2.2
SNRNP200O75643 AC099548.1-201ENST00000421443 426 ntBASIC1.28□□□□□ -2.2
SNRNP200O75643 AL365496.1-201ENST00000426885 215 ntBASIC1.28□□□□□ -2.2
SNRNP200O75643 USP12PX-201ENST00000432383 1057 ntBASIC1.28□□□□□ -2.2
SNRNP200O75643 AL512661.1-201ENST00000434586 1253 ntBASIC1.28□□□□□ -2.2
SNRNP200O75643 AC093801.2-201ENST00000503966 1050 ntBASIC1.28□□□□□ -2.2
SNRNP200O75643 AC093767.1-201ENST00000504523 156 ntBASIC1.28□□□□□ -2.2
SNRNP200O75643 SCARNA3-201ENST00000517097 143 ntBASIC1.28□□□□□ -2.2
SNRNP200O75643 ZNF705CP-201ENST00000530515 889 ntBASIC1.28□□□□□ -2.2
SNRNP200O75643 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC1.28□□□□□ -2.2
SNRNP200O75643 AL391261.3-201ENST00000557194 520 ntBASIC1.28□□□□□ -2.2
SNRNP200O75643 MTCYBP23-201ENST00000558717 1102 ntBASIC1.28□□□□□ -2.2
SNRNP200O75643 AC104229.1-201ENST00000561364 255 ntBASIC1.28□□□□□ -2.2
SNRNP200O75643 MIR5571-201ENST00000577998 113 ntBASIC1.28□□□□□ -2.2
SNRNP200O75643 BPTFP1-201ENST00000579209 492 ntBASIC1.28□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 96.2 ms