Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC3.16□□□□□ -1.9
CACNA1FO60840 AC090970.3-201ENST00000612566 866 ntBASIC3.16□□□□□ -1.9
CACNA1FO60840 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC3.16□□□□□ -1.9
CACNA1FO60840 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC3.16□□□□□ -1.9
CACNA1FO60840 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC3.16□□□□□ -1.9
CACNA1FO60840 GABPAP-201ENST00000419271 1356 ntBASIC3.16□□□□□ -1.9
CACNA1FO60840 MTND4P16-201ENST00000466108 1367 ntBASIC3.16□□□□□ -1.9
CACNA1FO60840 MTND4P29-201ENST00000503122 1372 ntBASIC3.16□□□□□ -1.9
CACNA1FO60840 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CACNA1FO60840 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.16□□□□□ -1.9
CACNA1FO60840 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
CACNA1FO60840 RNU6-1283P-201ENST00000365314 105 ntBASIC3.16□□□□□ -1.9
CACNA1FO60840 Y_RNA.453-201ENST00000384223 109 ntBASIC3.16□□□□□ -1.9
CACNA1FO60840 RNU6-348P-201ENST00000384386 107 ntBASIC3.16□□□□□ -1.9
CACNA1FO60840 MIR506-201ENST00000384998 124 ntBASIC3.16□□□□□ -1.9
CACNA1FO60840 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC3.16□□□□□ -1.9
CACNA1FO60840 MIR320C1-201ENST00000408566 88 ntBASIC3.16□□□□□ -1.9
CACNA1FO60840 AC234782.4-201ENST00000417646 1048 ntBASIC3.16□□□□□ -1.9
CACNA1FO60840 AC233728.2-201ENST00000425348 757 ntBASIC3.16□□□□□ -1.9
CACNA1FO60840 DPPA2P1-201ENST00000428060 556 ntBASIC3.16□□□□□ -1.9
CACNA1FO60840 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC3.16□□□□□ -1.9
CACNA1FO60840 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC3.16□□□□□ -1.9
CACNA1FO60840 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC3.16□□□□□ -1.9
CACNA1FO60840 GDI2P2-201ENST00000445131 608 ntBASIC3.16□□□□□ -1.9
CACNA1FO60840 MTND5P20-201ENST00000448677 143 ntBASIC3.16□□□□□ -1.9
CACNA1FO60840 SNRPFP4-201ENST00000456366 242 ntBASIC3.16□□□□□ -1.9
CACNA1FO60840 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC3.16□□□□□ -1.9
CACNA1FO60840 RN7SL429P-201ENST00000479090 223 ntBASIC3.16□□□□□ -1.9
CACNA1FO60840 RN7SL489P-201ENST00000486185 223 ntBASIC3.16□□□□□ -1.9
CACNA1FO60840 RN7SL327P-201ENST00000488659 223 ntBASIC3.16□□□□□ -1.9
CACNA1FO60840 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC3.16□□□□□ -1.9
CACNA1FO60840 SNORA31.1-201ENST00000515993 133 ntBASIC3.16□□□□□ -1.9
CACNA1FO60840 SNORA31.5-201ENST00000516190 133 ntBASIC3.16□□□□□ -1.9
CACNA1FO60840 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC3.16□□□□□ -1.9
CACNA1FO60840 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC3.16□□□□□ -1.9
CACNA1FO60840 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC3.16□□□□□ -1.9
CACNA1FO60840 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC3.16□□□□□ -1.9
CACNA1FO60840 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC3.16□□□□□ -1.9
CACNA1FO60840 AC010928.3-201ENST00000587712 541 ntBASIC3.16□□□□□ -1.9
CACNA1FO60840 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC3.16□□□□□ -1.9
CACNA1FO60840 AL022154.1-201ENST00000604698 785 ntBASIC3.16□□□□□ -1.9
CACNA1FO60840 AC008536.2-201ENST00000607284 349 ntBASIC3.16□□□□□ -1.9
CACNA1FO60840 AC004067.1-201ENST00000608733 700 ntBASIC3.16□□□□□ -1.9
CACNA1FO60840 RN7SL853P-201ENST00000617250 223 ntBASIC3.16□□□□□ -1.9
CACNA1FO60840 AC104985.2-201ENST00000620598 500 ntBASIC3.16□□□□□ -1.9
CACNA1FO60840 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
CACNA1FO60840 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
CACNA1FO60840 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
CACNA1FO60840 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
CACNA1FO60840 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC3.15□□□□□ -1.91
CACNA1FO60840 MTND1P21-201ENST00000412991 285 ntBASIC3.15□□□□□ -1.91
CACNA1FO60840 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC3.15□□□□□ -1.91
CACNA1FO60840 RPL7P30-201ENST00000420888 709 ntBASIC3.15□□□□□ -1.91
CACNA1FO60840 AC010975.2-201ENST00000427781 588 ntBASIC3.15□□□□□ -1.91
CACNA1FO60840 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC3.15□□□□□ -1.91
CACNA1FO60840 AL451074.3-201ENST00000437709 472 ntBASIC3.15□□□□□ -1.91
CACNA1FO60840 MTND4P25-201ENST00000441039 533 ntBASIC3.15□□□□□ -1.91
CACNA1FO60840 RAB11AP1-201ENST00000442978 646 ntBASIC3.15□□□□□ -1.91
CACNA1FO60840 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC3.15□□□□□ -1.91
CACNA1FO60840 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC3.15□□□□□ -1.91
CACNA1FO60840 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC3.15□□□□□ -1.91
CACNA1FO60840 VN1R17P-201ENST00000472048 1090 ntBASIC3.15□□□□□ -1.91
CACNA1FO60840 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.15□□□□□ -1.91
CACNA1FO60840 AP001086.1-201ENST00000494882 321 ntBASIC3.15□□□□□ -1.91
CACNA1FO60840 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.15□□□□□ -1.91
CACNA1FO60840 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.15□□□□□ -1.91
CACNA1FO60840 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC3.15□□□□□ -1.91
CACNA1FO60840 RPL12P50-201ENST00000603116 116 ntBASIC3.15□□□□□ -1.91
CACNA1FO60840 HSPE1P14-201ENST00000605812 302 ntBASIC3.15□□□□□ -1.91
CACNA1FO60840 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC3.15□□□□□ -1.91
CACNA1FO60840 AC090517.2-201ENST00000614966 680 ntBASIC3.15□□□□□ -1.91
CACNA1FO60840 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC3.15□□□□□ -1.91
CACNA1FO60840 FAM157B-203ENST00000639350 358 ntBASIC3.15□□□□□ -1.91
CACNA1FO60840 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
CACNA1FO60840 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.15□□□□□ -1.91
CACNA1FO60840 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.15□□□□□ -1.91
CACNA1FO60840 AC069528.2-201ENST00000624849 1991 ntBASIC3.15□□□□□ -1.91
CACNA1FO60840 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CACNA1FO60840 RNU4-82P-201ENST00000362443 140 ntBASIC3.14□□□□□ -1.91
CACNA1FO60840 RNU6-289P-201ENST00000364093 107 ntBASIC3.14□□□□□ -1.91
CACNA1FO60840 RNU4-12P-201ENST00000365233 139 ntBASIC3.14□□□□□ -1.91
CACNA1FO60840 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CACNA1FO60840 AL139095.1-201ENST00000404326 391 ntBASIC3.14□□□□□ -1.91
CACNA1FO60840 AL162578.1-201ENST00000406202 378 ntBASIC3.14□□□□□ -1.91
CACNA1FO60840 AC007390.1-201ENST00000415722 356 ntBASIC3.14□□□□□ -1.91
CACNA1FO60840 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC3.14□□□□□ -1.91
CACNA1FO60840 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.14□□□□□ -1.91
CACNA1FO60840 RABEPKP1-201ENST00000440529 1026 ntBASIC3.14□□□□□ -1.91
CACNA1FO60840 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC3.14□□□□□ -1.91
CACNA1FO60840 MTND6P13-201ENST00000443510 523 ntBASIC3.14□□□□□ -1.91
CACNA1FO60840 AL513328.1-201ENST00000446460 224 ntBASIC3.14□□□□□ -1.91
CACNA1FO60840 RPL23AP15-201ENST00000450202 459 ntBASIC3.14□□□□□ -1.91
CACNA1FO60840 RPS20P32-201ENST00000456044 356 ntBASIC3.14□□□□□ -1.91
CACNA1FO60840 FAM92A1P1-201ENST00000528023 890 ntBASIC3.14□□□□□ -1.91
CACNA1FO60840 SNORA59B-202ENST00000578183 701 ntBASIC3.14□□□□□ -1.91
CACNA1FO60840 AP001180.3-201ENST00000582221 145 ntBASIC3.14□□□□□ -1.91
CACNA1FO60840 MIR4719-201ENST00000585233 84 ntBASIC3.14□□□□□ -1.91
CACNA1FO60840 AC131902.3-201ENST00000611767 581 ntBASIC3.14□□□□□ -1.91
CACNA1FO60840 AC025594.3-201ENST00000613068 790 ntBASIC3.14□□□□□ -1.91
CACNA1FO60840 AC091834.1-201ENST00000614543 472 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms