Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
CCDC163A0A0D9SF12 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC4.35□□□□□ -1.71
CCDC163A0A0D9SF12 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CCDC163A0A0D9SF12 RNU1-14P-201ENST00000362759 152 ntBASIC4.35□□□□□ -1.71
CCDC163A0A0D9SF12 SNORA70.4-201ENST00000365509 134 ntBASIC4.35□□□□□ -1.71
CCDC163A0A0D9SF12 MDM4-202ENST00000367180 547 ntTSL 3 BASIC4.35□□□□□ -1.71
CCDC163A0A0D9SF12 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CCDC163A0A0D9SF12 MIR1183-201ENST00000408856 89 ntBASIC4.35□□□□□ -1.71
CCDC163A0A0D9SF12 VN1R36P-201ENST00000414936 291 ntBASIC4.35□□□□□ -1.71
CCDC163A0A0D9SF12 RPLP0P7-201ENST00000416050 667 ntBASIC4.35□□□□□ -1.71
CCDC163A0A0D9SF12 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.35□□□□□ -1.71
CCDC163A0A0D9SF12 CECR9-201ENST00000453421 199 ntBASIC4.35□□□□□ -1.71
CCDC163A0A0D9SF12 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC4.35□□□□□ -1.71
CCDC163A0A0D9SF12 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.35□□□□□ -1.71
CCDC163A0A0D9SF12 PPIAP15-201ENST00000479662 484 ntBASIC4.35□□□□□ -1.71
CCDC163A0A0D9SF12 ENSA-210ENST00000503241 574 ntTSL 3 BASIC4.35□□□□□ -1.71
CCDC163A0A0D9SF12 RNU1-61P-201ENST00000516107 151 ntBASIC4.35□□□□□ -1.71
CCDC163A0A0D9SF12 SNORA14.1-201ENST00000516113 141 ntBASIC4.35□□□□□ -1.71
CCDC163A0A0D9SF12 RNU6-277P-201ENST00000516272 106 ntBASIC4.35□□□□□ -1.71
CCDC163A0A0D9SF12 AC090151.1-201ENST00000520784 730 ntBASIC4.35□□□□□ -1.71
CCDC163A0A0D9SF12 IFITM8P-201ENST00000522529 394 ntBASIC4.35□□□□□ -1.71
CCDC163A0A0D9SF12 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC4.35□□□□□ -1.71
CCDC163A0A0D9SF12 APAF1-207ENST00000547743 651 ntTSL 3 BASIC4.35□□□□□ -1.71
CCDC163A0A0D9SF12 HSPE1P5-201ENST00000561489 272 ntBASIC4.35□□□□□ -1.71
CCDC163A0A0D9SF12 MIR4790-201ENST00000577799 79 ntBASIC4.35□□□□□ -1.71
CCDC163A0A0D9SF12 MIR4644-201ENST00000579929 84 ntBASIC4.35□□□□□ -1.71
CCDC163A0A0D9SF12 MIR3944-201ENST00000581277 108 ntBASIC4.35□□□□□ -1.71
CCDC163A0A0D9SF12 MIR3672-201ENST00000584290 82 ntBASIC4.35□□□□□ -1.71
CCDC163A0A0D9SF12 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.35□□□□□ -1.71
CCDC163A0A0D9SF12 MIR6875-201ENST00000617506 72 ntBASIC4.35□□□□□ -1.71
CCDC163A0A0D9SF12 MTND1P37-201ENST00000636562 264 ntBASIC4.35□□□□□ -1.71
CCDC163A0A0D9SF12 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.35□□□□□ -1.71
CCDC163A0A0D9SF12 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CCDC163A0A0D9SF12 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.35□□□□□ -1.71
CCDC163A0A0D9SF12 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
CCDC163A0A0D9SF12 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.35□□□□□ -1.71
CCDC163A0A0D9SF12 AC100778.3-201ENST00000580060 1750 ntBASIC4.35□□□□□ -1.71
CCDC163A0A0D9SF12 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
CCDC163A0A0D9SF12 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC4.34□□□□□ -1.71
CCDC163A0A0D9SF12 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
CCDC163A0A0D9SF12 AC107068.1-201ENST00000563286 4218 ntBASIC4.34□□□□□ -1.71
CCDC163A0A0D9SF12 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.34□□□□□ -1.71
CCDC163A0A0D9SF12 RNA5SP52-201ENST00000362448 134 ntBASIC4.34□□□□□ -1.71
CCDC163A0A0D9SF12 FAT1P1-201ENST00000406588 507 ntBASIC4.34□□□□□ -1.71
CCDC163A0A0D9SF12 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC4.34□□□□□ -1.71
CCDC163A0A0D9SF12 COX6B1P7-201ENST00000430845 235 ntBASIC4.34□□□□□ -1.71
CCDC163A0A0D9SF12 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC4.34□□□□□ -1.71
CCDC163A0A0D9SF12 SNORA71B-202ENST00000439232 272 ntBASIC4.34□□□□□ -1.71
CCDC163A0A0D9SF12 AC008264.1-201ENST00000447612 367 ntBASIC4.34□□□□□ -1.71
CCDC163A0A0D9SF12 BTF3P6-201ENST00000448054 499 ntBASIC4.34□□□□□ -1.71
CCDC163A0A0D9SF12 AC012181.1-201ENST00000479895 423 ntBASIC4.34□□□□□ -1.71
CCDC163A0A0D9SF12 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC4.34□□□□□ -1.71
CCDC163A0A0D9SF12 RN7SKP13-201ENST00000515933 244 ntBASIC4.34□□□□□ -1.71
CCDC163A0A0D9SF12 RNU6-1332P-201ENST00000516666 104 ntBASIC4.34□□□□□ -1.71
CCDC163A0A0D9SF12 RNU6-566P-201ENST00000516790 107 ntBASIC4.34□□□□□ -1.71
CCDC163A0A0D9SF12 RNU6-1315P-201ENST00000517187 99 ntBASIC4.34□□□□□ -1.71
CCDC163A0A0D9SF12 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC4.34□□□□□ -1.71
CCDC163A0A0D9SF12 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC4.34□□□□□ -1.71
CCDC163A0A0D9SF12 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC4.34□□□□□ -1.71
CCDC163A0A0D9SF12 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.34□□□□□ -1.71
CCDC163A0A0D9SF12 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC4.34□□□□□ -1.71
CCDC163A0A0D9SF12 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC4.34□□□□□ -1.71
CCDC163A0A0D9SF12 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC4.34□□□□□ -1.71
CCDC163A0A0D9SF12 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC4.34□□□□□ -1.71
CCDC163A0A0D9SF12 AC073539.2-201ENST00000597113 165 ntBASIC4.34□□□□□ -1.71
CCDC163A0A0D9SF12 AC002044.1-201ENST00000606707 158 ntBASIC4.34□□□□□ -1.71
CCDC163A0A0D9SF12 AL021997.2-201ENST00000615674 271 ntBASIC4.34□□□□□ -1.71
CCDC163A0A0D9SF12 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
CCDC163A0A0D9SF12 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CCDC163A0A0D9SF12 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
CCDC163A0A0D9SF12 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.72
CCDC163A0A0D9SF12 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.34□□□□□ -1.72
CCDC163A0A0D9SF12 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC4.34□□□□□ -1.72
CCDC163A0A0D9SF12 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.34□□□□□ -1.72
CCDC163A0A0D9SF12 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
CCDC163A0A0D9SF12 AL672167.1-204ENST00000641875 3017 ntBASIC4.33□□□□□ -1.72
CCDC163A0A0D9SF12 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.33□□□□□ -1.72
CCDC163A0A0D9SF12 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.33□□□□□ -1.72
CCDC163A0A0D9SF12 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.33□□□□□ -1.72
CCDC163A0A0D9SF12 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CCDC163A0A0D9SF12 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CCDC163A0A0D9SF12 RNA5SP295-201ENST00000362655 121 ntBASIC4.33□□□□□ -1.72
CCDC163A0A0D9SF12 RNA5SP175-201ENST00000364275 119 ntBASIC4.33□□□□□ -1.72
CCDC163A0A0D9SF12 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
CCDC163A0A0D9SF12 Y_RNA.419-201ENST00000384041 102 ntBASIC4.33□□□□□ -1.72
CCDC163A0A0D9SF12 RNU6-1011P-201ENST00000384668 107 ntBASIC4.33□□□□□ -1.72
CCDC163A0A0D9SF12 MIR200C-201ENST00000384980 68 ntBASIC4.33□□□□□ -1.72
CCDC163A0A0D9SF12 MIR449B-201ENST00000384995 97 ntBASIC4.33□□□□□ -1.72
CCDC163A0A0D9SF12 RNA5SP372-201ENST00000390836 115 ntBASIC4.33□□□□□ -1.72
CCDC163A0A0D9SF12 MIR548F5-201ENST00000408421 86 ntBASIC4.33□□□□□ -1.72
CCDC163A0A0D9SF12 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CCDC163A0A0D9SF12 RNU6-1025P-201ENST00000410629 104 ntBASIC4.33□□□□□ -1.72
CCDC163A0A0D9SF12 AL158156.1-201ENST00000422509 473 ntBASIC4.33□□□□□ -1.72
CCDC163A0A0D9SF12 AC018644.1-201ENST00000429934 551 ntBASIC4.33□□□□□ -1.72
CCDC163A0A0D9SF12 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.33□□□□□ -1.72
CCDC163A0A0D9SF12 RANP8-201ENST00000444720 713 ntBASIC4.33□□□□□ -1.72
CCDC163A0A0D9SF12 AC107399.1-201ENST00000451226 265 ntBASIC4.33□□□□□ -1.72
CCDC163A0A0D9SF12 AC087884.1-201ENST00000469738 328 ntBASIC4.33□□□□□ -1.72
CCDC163A0A0D9SF12 RPS23P3-201ENST00000470993 430 ntBASIC4.33□□□□□ -1.72
CCDC163A0A0D9SF12 AC117503.1-201ENST00000472241 394 ntBASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 92.4 ms