Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 Y_RNA.670-201ENST00000516255 105 ntBASIC4.45□□□□□ -1.7
HCFC2Q9Y5Z7 RN7SKP82-201ENST00000516786 223 ntBASIC4.45□□□□□ -1.7
HCFC2Q9Y5Z7 AC103783.1-201ENST00000520506 373 ntBASIC4.45□□□□□ -1.7
HCFC2Q9Y5Z7 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC4.45□□□□□ -1.7
HCFC2Q9Y5Z7 STX3-204ENST00000530221 534 ntTSL 5 BASIC4.45□□□□□ -1.7
HCFC2Q9Y5Z7 CR383656.7-201ENST00000548164 174 ntBASIC4.45□□□□□ -1.7
HCFC2Q9Y5Z7 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.45□□□□□ -1.7
HCFC2Q9Y5Z7 HNRNPCP4-201ENST00000571636 900 ntBASIC4.45□□□□□ -1.7
HCFC2Q9Y5Z7 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC4.45□□□□□ -1.7
HCFC2Q9Y5Z7 MIR5685-201ENST00000579080 79 ntBASIC4.45□□□□□ -1.7
HCFC2Q9Y5Z7 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC4.45□□□□□ -1.7
HCFC2Q9Y5Z7 MIR4298-201ENST00000584380 73 ntBASIC4.45□□□□□ -1.7
HCFC2Q9Y5Z7 ATP1B3P1-201ENST00000605365 821 ntBASIC4.45□□□□□ -1.7
HCFC2Q9Y5Z7 AC100812.1-201ENST00000607622 580 ntBASIC4.45□□□□□ -1.7
HCFC2Q9Y5Z7 TUG1_2.1-201ENST00000614234 87 ntBASIC4.45□□□□□ -1.7
HCFC2Q9Y5Z7 AC007998.5-201ENST00000622938 237 ntBASIC4.45□□□□□ -1.7
HCFC2Q9Y5Z7 CR392039.5-201ENST00000623201 510 ntBASIC4.45□□□□□ -1.7
HCFC2Q9Y5Z7 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.45□□□□□ -1.7
HCFC2Q9Y5Z7 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
HCFC2Q9Y5Z7 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
HCFC2Q9Y5Z7 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
HCFC2Q9Y5Z7 AC005592.1-201ENST00000566527 1640 ntBASIC4.45□□□□□ -1.7
HCFC2Q9Y5Z7 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
HCFC2Q9Y5Z7 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
HCFC2Q9Y5Z7 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
HCFC2Q9Y5Z7 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
HCFC2Q9Y5Z7 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
HCFC2Q9Y5Z7 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
HCFC2Q9Y5Z7 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
HCFC2Q9Y5Z7 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
HCFC2Q9Y5Z7 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.44□□□□□ -1.7
HCFC2Q9Y5Z7 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
HCFC2Q9Y5Z7 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
HCFC2Q9Y5Z7 AC107027.3-201ENST00000565095 3473 ntBASIC4.44□□□□□ -1.7
HCFC2Q9Y5Z7 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
HCFC2Q9Y5Z7 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
HCFC2Q9Y5Z7 MAPK10-286ENST00000641208 8747 ntBASIC4.44□□□□□ -1.7
HCFC2Q9Y5Z7 SNORD46.1-201ENST00000364139 104 ntBASIC4.44□□□□□ -1.7
HCFC2Q9Y5Z7 Y_RNA.428-201ENST00000384078 102 ntBASIC4.44□□□□□ -1.7
HCFC2Q9Y5Z7 MIR200C-201ENST00000384980 68 ntBASIC4.44□□□□□ -1.7
HCFC2Q9Y5Z7 Y_RNA.645-201ENST00000391229 102 ntBASIC4.44□□□□□ -1.7
HCFC2Q9Y5Z7 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
HCFC2Q9Y5Z7 RPL7P37-201ENST00000425095 738 ntBASIC4.44□□□□□ -1.7
HCFC2Q9Y5Z7 OR2AH1P-201ENST00000425717 928 ntBASIC4.44□□□□□ -1.7
HCFC2Q9Y5Z7 USMG5P1-201ENST00000425964 177 ntBASIC4.44□□□□□ -1.7
HCFC2Q9Y5Z7 AC093106.2-201ENST00000428212 385 ntBASIC4.44□□□□□ -1.7
HCFC2Q9Y5Z7 HIGD1AP11-201ENST00000438361 280 ntBASIC4.44□□□□□ -1.7
HCFC2Q9Y5Z7 RPL23AP46-201ENST00000438548 490 ntBASIC4.44□□□□□ -1.7
HCFC2Q9Y5Z7 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC4.44□□□□□ -1.7
HCFC2Q9Y5Z7 AC008481.1-201ENST00000463278 396 ntBASIC4.44□□□□□ -1.7
HCFC2Q9Y5Z7 HMGB1P25-201ENST00000468402 607 ntBASIC4.44□□□□□ -1.7
HCFC2Q9Y5Z7 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC4.44□□□□□ -1.7
HCFC2Q9Y5Z7 AC026801.2-201ENST00000515352 425 ntBASIC4.44□□□□□ -1.7
HCFC2Q9Y5Z7 Y_RNA.661-201ENST00000516003 99 ntBASIC4.44□□□□□ -1.7
HCFC2Q9Y5Z7 RNU6-513P-201ENST00000516104 104 ntBASIC4.44□□□□□ -1.7
HCFC2Q9Y5Z7 RNU6-307P-201ENST00000516743 106 ntBASIC4.44□□□□□ -1.7
HCFC2Q9Y5Z7 AC093591.2-201ENST00000565254 3843 ntBASIC4.44□□□□□ -1.7
HCFC2Q9Y5Z7 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
HCFC2Q9Y5Z7 AC104695.3-201ENST00000604052 296 ntBASIC4.44□□□□□ -1.7
HCFC2Q9Y5Z7 AC010201.1-201ENST00000605051 540 ntBASIC4.44□□□□□ -1.7
HCFC2Q9Y5Z7 AC006329.2-201ENST00000611491 394 ntBASIC4.44□□□□□ -1.7
HCFC2Q9Y5Z7 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.44□□□□□ -1.7
HCFC2Q9Y5Z7 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC4.44□□□□□ -1.7
HCFC2Q9Y5Z7 MIR6500-201ENST00000622700 86 ntBASIC4.44□□□□□ -1.7
HCFC2Q9Y5Z7 AC012442.3-202ENST00000636742 206 ntBASIC4.44□□□□□ -1.7
HCFC2Q9Y5Z7 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
HCFC2Q9Y5Z7 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
HCFC2Q9Y5Z7 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.43□□□□□ -1.7
HCFC2Q9Y5Z7 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.43□□□□□ -1.7
HCFC2Q9Y5Z7 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
HCFC2Q9Y5Z7 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.43□□□□□ -1.7
HCFC2Q9Y5Z7 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC4.43□□□□□ -1.7
HCFC2Q9Y5Z7 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC4.43□□□□□ -1.7
HCFC2Q9Y5Z7 AC019155.1-201ENST00000382242 574 ntBASIC4.43□□□□□ -1.7
HCFC2Q9Y5Z7 PVALB-202ENST00000404171 422 ntTSL 2 BASIC4.43□□□□□ -1.7
HCFC2Q9Y5Z7 NDUFS5P1-201ENST00000405668 289 ntBASIC4.43□□□□□ -1.7
HCFC2Q9Y5Z7 RNU2-47P-201ENST00000410649 186 ntBASIC4.43□□□□□ -1.7
HCFC2Q9Y5Z7 Z99755.1-201ENST00000414048 380 ntBASIC4.43□□□□□ -1.7
HCFC2Q9Y5Z7 UBE2FP1-201ENST00000416536 447 ntBASIC4.43□□□□□ -1.7
HCFC2Q9Y5Z7 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.43□□□□□ -1.7
HCFC2Q9Y5Z7 RPL30P3-201ENST00000424262 333 ntBASIC4.43□□□□□ -1.7
HCFC2Q9Y5Z7 AL669831.1-202ENST00000428504 417 ntBASIC4.43□□□□□ -1.7
HCFC2Q9Y5Z7 AC236972.1-201ENST00000433225 199 ntBASIC4.43□□□□□ -1.7
HCFC2Q9Y5Z7 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC4.43□□□□□ -1.7
HCFC2Q9Y5Z7 AL500522.2-201ENST00000448562 343 ntBASIC4.43□□□□□ -1.7
HCFC2Q9Y5Z7 BX276092.4-201ENST00000452056 248 ntBASIC4.43□□□□□ -1.7
HCFC2Q9Y5Z7 AC007967.1-201ENST00000455422 1159 ntBASIC4.43□□□□□ -1.7
HCFC2Q9Y5Z7 AP001086.1-201ENST00000494882 321 ntBASIC4.43□□□□□ -1.7
HCFC2Q9Y5Z7 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC4.43□□□□□ -1.7
HCFC2Q9Y5Z7 RNU6-635P-201ENST00000516651 102 ntBASIC4.43□□□□□ -1.7
HCFC2Q9Y5Z7 RNU6-699P-201ENST00000517081 110 ntBASIC4.43□□□□□ -1.7
HCFC2Q9Y5Z7 SNORD116.3-201ENST00000517176 78 ntBASIC4.43□□□□□ -1.7
HCFC2Q9Y5Z7 AP005902.1-201ENST00000521358 186 ntBASIC4.43□□□□□ -1.7
HCFC2Q9Y5Z7 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC4.43□□□□□ -1.7
HCFC2Q9Y5Z7 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
HCFC2Q9Y5Z7 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC4.43□□□□□ -1.7
HCFC2Q9Y5Z7 AC005899.2-201ENST00000584353 90 ntBASIC4.43□□□□□ -1.7
HCFC2Q9Y5Z7 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC4.43□□□□□ -1.7
HCFC2Q9Y5Z7 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC4.43□□□□□ -1.7
HCFC2Q9Y5Z7 AC107871.2-201ENST00000612894 502 ntBASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms