Protein–RNA interactions for Protein: Q9UHB6

LIMA1, LIM domain and actin-binding protein 1, humanhuman

Known RBP Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1Q9UHB6 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC3.4□□□□□ -1.87
LIMA1Q9UHB6 AL512844.2-201ENST00000433990 593 ntBASIC3.4□□□□□ -1.87
LIMA1Q9UHB6 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC3.4□□□□□ -1.87
LIMA1Q9UHB6 AC073614.1-201ENST00000438690 650 ntBASIC3.4□□□□□ -1.87
LIMA1Q9UHB6 Z82210.1-201ENST00000440037 231 ntBASIC3.4□□□□□ -1.87
LIMA1Q9UHB6 PIGFP3-201ENST00000441918 722 ntBASIC3.4□□□□□ -1.87
LIMA1Q9UHB6 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC3.4□□□□□ -1.87
LIMA1Q9UHB6 RGS5-217ENST00000451759 835 ntTSL 3 BASIC3.4□□□□□ -1.87
LIMA1Q9UHB6 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.4□□□□□ -1.87
LIMA1Q9UHB6 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC3.4□□□□□ -1.87
LIMA1Q9UHB6 AC079140.3-201ENST00000511111 550 ntBASIC3.4□□□□□ -1.87
LIMA1Q9UHB6 RNU6-927P-201ENST00000516199 100 ntBASIC3.4□□□□□ -1.87
LIMA1Q9UHB6 RNA5SP291-201ENST00000517222 105 ntBASIC3.4□□□□□ -1.87
LIMA1Q9UHB6 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC3.4□□□□□ -1.87
LIMA1Q9UHB6 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
LIMA1Q9UHB6 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC3.4□□□□□ -1.87
LIMA1Q9UHB6 ARL1-211ENST00000551828 776 ntTSL 5 BASIC3.4□□□□□ -1.87
LIMA1Q9UHB6 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC3.4□□□□□ -1.87
LIMA1Q9UHB6 TRAV37-201ENST00000553906 342 ntBASIC3.4□□□□□ -1.87
LIMA1Q9UHB6 TRAV28-201ENST00000557548 323 ntBASIC3.4□□□□□ -1.87
LIMA1Q9UHB6 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.4□□□□□ -1.87
LIMA1Q9UHB6 NRBF2P1-201ENST00000587407 859 ntBASIC3.4□□□□□ -1.87
LIMA1Q9UHB6 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.4□□□□□ -1.87
LIMA1Q9UHB6 AC015871.2-201ENST00000603605 948 ntBASIC3.4□□□□□ -1.87
LIMA1Q9UHB6 AL670379.6-201ENST00000603753 252 ntBASIC3.4□□□□□ -1.87
LIMA1Q9UHB6 AL670379.11-201ENST00000604059 253 ntBASIC3.4□□□□□ -1.87
LIMA1Q9UHB6 HSPE1P7-201ENST00000604681 321 ntBASIC3.4□□□□□ -1.87
LIMA1Q9UHB6 AC008162.1-201ENST00000604718 254 ntBASIC3.4□□□□□ -1.87
LIMA1Q9UHB6 AL670379.1-201ENST00000604752 252 ntBASIC3.4□□□□□ -1.87
LIMA1Q9UHB6 AL670379.5-201ENST00000605253 252 ntBASIC3.4□□□□□ -1.87
LIMA1Q9UHB6 AL670379.12-201ENST00000605291 253 ntBASIC3.4□□□□□ -1.87
LIMA1Q9UHB6 AL670379.8-201ENST00000605353 252 ntBASIC3.4□□□□□ -1.87
LIMA1Q9UHB6 AL109618.2-201ENST00000605527 211 ntBASIC3.4□□□□□ -1.87
LIMA1Q9UHB6 AL670379.7-201ENST00000605823 252 ntBASIC3.4□□□□□ -1.87
LIMA1Q9UHB6 AC109347.2-201ENST00000610220 349 ntBASIC3.4□□□□□ -1.87
LIMA1Q9UHB6 AL133173.2-201ENST00000614270 90 ntBASIC3.4□□□□□ -1.87
LIMA1Q9UHB6 AC009509.4-201ENST00000619202 509 ntBASIC3.4□□□□□ -1.87
LIMA1Q9UHB6 AC006111.3-201ENST00000622137 383 ntBASIC3.4□□□□□ -1.87
LIMA1Q9UHB6 SNORA50A-202ENST00000629536 136 ntBASIC3.4□□□□□ -1.87
LIMA1Q9UHB6 AL049641.1-201ENST00000441055 1948 ntBASIC3.4□□□□□ -1.87
LIMA1Q9UHB6 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
LIMA1Q9UHB6 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
LIMA1Q9UHB6 HSPE1P11-201ENST00000339579 310 ntBASIC3.39□□□□□ -1.87
LIMA1Q9UHB6 SNORD56.2-201ENST00000363242 71 ntBASIC3.39□□□□□ -1.87
LIMA1Q9UHB6 RNU4-24P-201ENST00000364565 139 ntBASIC3.39□□□□□ -1.87
LIMA1Q9UHB6 RNU5E-6P-201ENST00000365574 115 ntBASIC3.39□□□□□ -1.87
LIMA1Q9UHB6 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC3.39□□□□□ -1.87
LIMA1Q9UHB6 RNU6-701P-201ENST00000384059 107 ntBASIC3.39□□□□□ -1.87
LIMA1Q9UHB6 Y_RNA.436-201ENST00000384097 102 ntBASIC3.39□□□□□ -1.87
LIMA1Q9UHB6 RPS3AP36-201ENST00000398190 775 ntBASIC3.39□□□□□ -1.87
LIMA1Q9UHB6 AL357075.1-201ENST00000404107 726 ntBASIC3.39□□□□□ -1.87
LIMA1Q9UHB6 ERMN-204ENST00000409925 556 ntTSL 4 BASIC3.39□□□□□ -1.87
LIMA1Q9UHB6 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
LIMA1Q9UHB6 CDK8P2-201ENST00000415020 547 ntBASIC3.39□□□□□ -1.87
LIMA1Q9UHB6 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC3.39□□□□□ -1.87
LIMA1Q9UHB6 C1DP2-201ENST00000418167 426 ntBASIC3.39□□□□□ -1.87
LIMA1Q9UHB6 ZNF90P2-204ENST00000419323 1075 ntBASIC3.39□□□□□ -1.87
LIMA1Q9UHB6 RAC1P6-201ENST00000423911 575 ntBASIC3.39□□□□□ -1.87
LIMA1Q9UHB6 AL589823.1-201ENST00000429577 183 ntBASIC3.39□□□□□ -1.87
LIMA1Q9UHB6 RPL23AP69-201ENST00000431134 458 ntBASIC3.39□□□□□ -1.87
LIMA1Q9UHB6 NEK4P1-201ENST00000433383 879 ntBASIC3.39□□□□□ -1.87
LIMA1Q9UHB6 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC3.39□□□□□ -1.87
LIMA1Q9UHB6 SNRPGP6-201ENST00000451124 220 ntBASIC3.39□□□□□ -1.87
LIMA1Q9UHB6 MTCO2P18-201ENST00000457151 658 ntBASIC3.39□□□□□ -1.87
LIMA1Q9UHB6 FAM133DP-201ENST00000464802 691 ntBASIC3.39□□□□□ -1.87
LIMA1Q9UHB6 KC877373.1-201ENST00000479066 408 ntBASIC3.39□□□□□ -1.87
LIMA1Q9UHB6 RN7SL432P-201ENST00000484057 298 ntBASIC3.39□□□□□ -1.87
LIMA1Q9UHB6 Vault.3-201ENST00000516676 95 ntBASIC3.39□□□□□ -1.87
LIMA1Q9UHB6 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC3.39□□□□□ -1.87
LIMA1Q9UHB6 AC022616.3-201ENST00000523940 148 ntBASIC3.39□□□□□ -1.87
LIMA1Q9UHB6 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC3.39□□□□□ -1.87
LIMA1Q9UHB6 MIR3611-201ENST00000584484 83 ntBASIC3.39□□□□□ -1.87
LIMA1Q9UHB6 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.39□□□□□ -1.87
LIMA1Q9UHB6 SNORA51-201ENST00000606420 132 ntBASIC3.39□□□□□ -1.87
LIMA1Q9UHB6 AC006566.1-201ENST00000608943 513 ntBASIC3.39□□□□□ -1.87
LIMA1Q9UHB6 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC3.39□□□□□ -1.87
LIMA1Q9UHB6 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.39□□□□□ -1.87
LIMA1Q9UHB6 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.39□□□□□ -1.87
LIMA1Q9UHB6 MTND1P37-201ENST00000636562 264 ntBASIC3.39□□□□□ -1.87
LIMA1Q9UHB6 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC3.39□□□□□ -1.87
LIMA1Q9UHB6 AC093908.1-201ENST00000623125 8092 ntBASIC3.39□□□□□ -1.87
LIMA1Q9UHB6 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.38□□□□□ -1.87
LIMA1Q9UHB6 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
LIMA1Q9UHB6 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.38□□□□□ -1.87
LIMA1Q9UHB6 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
LIMA1Q9UHB6 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
LIMA1Q9UHB6 AL035425.3-201ENST00000564206 4996 ntBASIC3.38□□□□□ -1.87
LIMA1Q9UHB6 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
LIMA1Q9UHB6 Y_RNA.359-201ENST00000365498 102 ntBASIC3.38□□□□□ -1.87
LIMA1Q9UHB6 SNORA20.2-201ENST00000383922 131 ntBASIC3.38□□□□□ -1.87
LIMA1Q9UHB6 SNORA7.4-201ENST00000384249 137 ntBASIC3.38□□□□□ -1.87
LIMA1Q9UHB6 PTMAP2-201ENST00000397627 327 ntBASIC3.38□□□□□ -1.87
LIMA1Q9UHB6 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC3.38□□□□□ -1.87
LIMA1Q9UHB6 ARPC3P1-201ENST00000437218 533 ntBASIC3.38□□□□□ -1.87
LIMA1Q9UHB6 BNIP3P2-201ENST00000441221 577 ntBASIC3.38□□□□□ -1.87
LIMA1Q9UHB6 Z75741.1-201ENST00000446793 314 ntBASIC3.38□□□□□ -1.87
LIMA1Q9UHB6 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC3.38□□□□□ -1.87
LIMA1Q9UHB6 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC3.38□□□□□ -1.87
LIMA1Q9UHB6 AC013267.1-201ENST00000458227 267 ntBASIC3.38□□□□□ -1.87
LIMA1Q9UHB6 RNU6-420P-201ENST00000458780 107 ntBASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 111.4 ms