Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC4.39□□□□□ -1.71
CD248Q9HCU0 AC055855.1-201ENST00000489563 579 ntBASIC4.39□□□□□ -1.71
CD248Q9HCU0 HMGB1P30-201ENST00000492455 606 ntBASIC4.39□□□□□ -1.71
CD248Q9HCU0 MRPS35P2-201ENST00000508242 191 ntBASIC4.39□□□□□ -1.71
CD248Q9HCU0 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC4.39□□□□□ -1.71
CD248Q9HCU0 RNU6-976P-201ENST00000516086 111 ntBASIC4.39□□□□□ -1.71
CD248Q9HCU0 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CD248Q9HCU0 AP002404.1-201ENST00000532005 451 ntBASIC4.39□□□□□ -1.71
CD248Q9HCU0 AP000889.2-201ENST00000532684 490 ntBASIC4.39□□□□□ -1.71
CD248Q9HCU0 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC4.39□□□□□ -1.71
CD248Q9HCU0 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC4.39□□□□□ -1.71
CD248Q9HCU0 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC4.39□□□□□ -1.71
CD248Q9HCU0 MYL12BP1-201ENST00000569826 507 ntBASIC4.39□□□□□ -1.71
CD248Q9HCU0 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC4.39□□□□□ -1.71
CD248Q9HCU0 AC022893.3-201ENST00000607665 437 ntBASIC4.39□□□□□ -1.71
CD248Q9HCU0 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
CD248Q9HCU0 AC133104.2-201ENST00000615272 193 ntBASIC4.39□□□□□ -1.71
CD248Q9HCU0 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.39□□□□□ -1.71
CD248Q9HCU0 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CD248Q9HCU0 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CD248Q9HCU0 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CD248Q9HCU0 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
CD248Q9HCU0 AC107081.3-201ENST00000612715 2034 ntBASIC4.39□□□□□ -1.71
CD248Q9HCU0 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CD248Q9HCU0 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
CD248Q9HCU0 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CD248Q9HCU0 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.38□□□□□ -1.71
CD248Q9HCU0 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
CD248Q9HCU0 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CD248Q9HCU0 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
CD248Q9HCU0 SPRR2C-201ENST00000290702 219 ntBASIC4.38□□□□□ -1.71
CD248Q9HCU0 Y_RNA.135-201ENST00000363439 95 ntBASIC4.38□□□□□ -1.71
CD248Q9HCU0 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
CD248Q9HCU0 MIR649-201ENST00000384843 97 ntBASIC4.38□□□□□ -1.71
CD248Q9HCU0 MRPL42P3-201ENST00000401492 326 ntBASIC4.38□□□□□ -1.71
CD248Q9HCU0 Z98941.1-201ENST00000407764 100 ntBASIC4.38□□□□□ -1.71
CD248Q9HCU0 AL023807.1-201ENST00000407932 359 ntBASIC4.38□□□□□ -1.71
CD248Q9HCU0 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC4.38□□□□□ -1.71
CD248Q9HCU0 RN7SKP235-201ENST00000410662 305 ntBASIC4.38□□□□□ -1.71
CD248Q9HCU0 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC4.38□□□□□ -1.71
CD248Q9HCU0 AC244098.2-201ENST00000422068 99 ntBASIC4.38□□□□□ -1.71
CD248Q9HCU0 RPL23AP38-201ENST00000423801 469 ntBASIC4.38□□□□□ -1.71
CD248Q9HCU0 RPL7L1P10-201ENST00000427790 463 ntBASIC4.38□□□□□ -1.71
CD248Q9HCU0 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC4.38□□□□□ -1.71
CD248Q9HCU0 AL132765.1-201ENST00000434165 553 ntBASIC4.38□□□□□ -1.71
CD248Q9HCU0 RPL23AP89-201ENST00000439324 255 ntBASIC4.38□□□□□ -1.71
CD248Q9HCU0 IGKV1OR-3-201ENST00000446944 348 ntBASIC4.38□□□□□ -1.71
CD248Q9HCU0 AC005297.2-201ENST00000450430 606 ntBASIC4.38□□□□□ -1.71
CD248Q9HCU0 AC104308.1-201ENST00000454621 333 ntBASIC4.38□□□□□ -1.71
CD248Q9HCU0 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.38□□□□□ -1.71
CD248Q9HCU0 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC4.38□□□□□ -1.71
CD248Q9HCU0 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CD248Q9HCU0 IGKV2D-23-201ENST00000518179 286 ntBASIC4.38□□□□□ -1.71
CD248Q9HCU0 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC4.38□□□□□ -1.71
CD248Q9HCU0 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CD248Q9HCU0 AP005435.4-201ENST00000529514 284 ntBASIC4.38□□□□□ -1.71
CD248Q9HCU0 AC103843.2-201ENST00000530523 682 ntBASIC4.38□□□□□ -1.71
CD248Q9HCU0 IMMP1LP2-201ENST00000552954 492 ntBASIC4.38□□□□□ -1.71
CD248Q9HCU0 AC034105.4-201ENST00000568304 277 ntBASIC4.38□□□□□ -1.71
CD248Q9HCU0 AC010653.1-201ENST00000571108 881 ntBASIC4.38□□□□□ -1.71
CD248Q9HCU0 MIR4790-201ENST00000577799 79 ntBASIC4.38□□□□□ -1.71
CD248Q9HCU0 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC4.38□□□□□ -1.71
CD248Q9HCU0 AL109918.3-201ENST00000603072 338 ntBASIC4.38□□□□□ -1.71
CD248Q9HCU0 AL121992.2-201ENST00000606262 256 ntBASIC4.38□□□□□ -1.71
CD248Q9HCU0 FAM27D1-201ENST00000612308 341 ntBASIC4.38□□□□□ -1.71
CD248Q9HCU0 uc_338.12-201ENST00000616344 181 ntBASIC4.38□□□□□ -1.71
CD248Q9HCU0 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
CD248Q9HCU0 USP8P1-201ENST00000494673 3183 ntBASIC4.38□□□□□ -1.71
CD248Q9HCU0 NXPH1-205ENST00000602349 1953 ntBASIC4.38□□□□□ -1.71
CD248Q9HCU0 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CD248Q9HCU0 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
CD248Q9HCU0 MFSD8-242ENST00000641690 4199 ntBASIC4.37□□□□□ -1.71
CD248Q9HCU0 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CD248Q9HCU0 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC4.37□□□□□ -1.71
CD248Q9HCU0 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.37□□□□□ -1.71
CD248Q9HCU0 AL049641.1-201ENST00000441055 1948 ntBASIC4.37□□□□□ -1.71
CD248Q9HCU0 RNU1-14P-201ENST00000362759 152 ntBASIC4.37□□□□□ -1.71
CD248Q9HCU0 RNU6-1243P-201ENST00000364028 107 ntBASIC4.37□□□□□ -1.71
CD248Q9HCU0 RNU1-64P-201ENST00000365443 163 ntBASIC4.37□□□□□ -1.71
CD248Q9HCU0 SNORA63.7-201ENST00000365579 123 ntBASIC4.37□□□□□ -1.71
CD248Q9HCU0 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC4.37□□□□□ -1.71
CD248Q9HCU0 RNU6-1032P-201ENST00000384100 107 ntBASIC4.37□□□□□ -1.71
CD248Q9HCU0 RNU6-39P-201ENST00000384344 107 ntBASIC4.37□□□□□ -1.71
CD248Q9HCU0 SNORD3H-201ENST00000384486 214 ntBASIC4.37□□□□□ -1.71
CD248Q9HCU0 RNU6-441P-201ENST00000384545 106 ntBASIC4.37□□□□□ -1.71
CD248Q9HCU0 RNU4-70P-201ENST00000384579 139 ntBASIC4.37□□□□□ -1.71
CD248Q9HCU0 RNU2-47P-201ENST00000410649 186 ntBASIC4.37□□□□□ -1.71
CD248Q9HCU0 SNORA74C-2-201ENST00000411179 201 ntBASIC4.37□□□□□ -1.71
CD248Q9HCU0 OR6C66P-201ENST00000414917 930 ntBASIC4.37□□□□□ -1.71
CD248Q9HCU0 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC4.37□□□□□ -1.71
CD248Q9HCU0 FABP5P14-201ENST00000437273 393 ntBASIC4.37□□□□□ -1.71
CD248Q9HCU0 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC4.37□□□□□ -1.71
CD248Q9HCU0 AC104058.1-201ENST00000448028 297 ntBASIC4.37□□□□□ -1.71
CD248Q9HCU0 NANOGP10-201ENST00000453325 895 ntBASIC4.37□□□□□ -1.71
CD248Q9HCU0 HMGB1P15-201ENST00000453854 435 ntBASIC4.37□□□□□ -1.71
CD248Q9HCU0 MTCO3P10-201ENST00000455912 772 ntBASIC4.37□□□□□ -1.71
CD248Q9HCU0 RNU7-182P-201ENST00000459009 62 ntBASIC4.37□□□□□ -1.71
CD248Q9HCU0 MIR2053-201ENST00000459295 91 ntBASIC4.37□□□□□ -1.71
CD248Q9HCU0 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.37□□□□□ -1.71
CD248Q9HCU0 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 246.6 ms