Protein–RNA interactions for Protein: Q99626

CDX2, Homeobox protein CDX-2, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2Q99626 AC117532.1-201ENST00000514638 323 ntBASIC2.3□□□□□ -2.04
CDX2Q99626 RNA5SP182-201ENST00000516064 82 ntBASIC2.3□□□□□ -2.04
CDX2Q99626 CR383656.7-201ENST00000548164 174 ntBASIC2.3□□□□□ -2.04
CDX2Q99626 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC2.3□□□□□ -2.04
CDX2Q99626 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC2.3□□□□□ -2.04
CDX2Q99626 SUB1P3-201ENST00000564581 315 ntBASIC2.3□□□□□ -2.04
CDX2Q99626 AL158211.1-201ENST00000566763 763 ntBASIC2.3□□□□□ -2.04
CDX2Q99626 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC2.3□□□□□ -2.04
CDX2Q99626 GLUD1P4-201ENST00000590914 418 ntBASIC2.3□□□□□ -2.04
CDX2Q99626 AC106900.2-201ENST00000604994 317 ntBASIC2.3□□□□□ -2.04
CDX2Q99626 AC080013.4-201ENST00000607624 649 ntBASIC2.3□□□□□ -2.04
CDX2Q99626 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC2.3□□□□□ -2.04
CDX2Q99626 CDR1-202ENST00000625883 1485 ntBASIC2.3□□□□□ -2.04
CDX2Q99626 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
CDX2Q99626 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.29□□□□□ -2.04
CDX2Q99626 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
CDX2Q99626 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.29□□□□□ -2.04
CDX2Q99626 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC2.29□□□□□ -2.04
CDX2Q99626 Y_RNA.112-201ENST00000363250 102 ntBASIC2.29□□□□□ -2.04
CDX2Q99626 RNA5SP325-201ENST00000363756 130 ntBASIC2.29□□□□□ -2.04
CDX2Q99626 RNU6-343P-201ENST00000364709 104 ntBASIC2.29□□□□□ -2.04
CDX2Q99626 RNY1P14-201ENST00000384426 108 ntBASIC2.29□□□□□ -2.04
CDX2Q99626 Y_RNA.548-201ENST00000384656 105 ntBASIC2.29□□□□□ -2.04
CDX2Q99626 SNRPEP2-201ENST00000397592 279 ntBASIC2.29□□□□□ -2.04
CDX2Q99626 MTND4P13-201ENST00000402078 1023 ntBASIC2.29□□□□□ -2.04
CDX2Q99626 RNU4-62P-201ENST00000410125 130 ntBASIC2.29□□□□□ -2.04
CDX2Q99626 RNU2-25P-201ENST00000411041 191 ntBASIC2.29□□□□□ -2.04
CDX2Q99626 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC2.29□□□□□ -2.04
CDX2Q99626 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC2.29□□□□□ -2.04
CDX2Q99626 RPL18AP17-201ENST00000455326 198 ntBASIC2.29□□□□□ -2.04
CDX2Q99626 AC069528.1-202ENST00000482888 637 ntBASIC2.29□□□□□ -2.04
CDX2Q99626 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC2.29□□□□□ -2.04
CDX2Q99626 AC109464.2-201ENST00000510242 943 ntBASIC2.29□□□□□ -2.04
CDX2Q99626 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.29□□□□□ -2.04
CDX2Q99626 RNA5SP200-201ENST00000516360 103 ntBASIC2.29□□□□□ -2.04
CDX2Q99626 SCARNA16.3-201ENST00000516595 184 ntBASIC2.29□□□□□ -2.04
CDX2Q99626 RNU6-826P-201ENST00000516827 104 ntBASIC2.29□□□□□ -2.04
CDX2Q99626 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
CDX2Q99626 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC2.29□□□□□ -2.04
CDX2Q99626 AC010376.1-201ENST00000522101 334 ntBASIC2.29□□□□□ -2.04
CDX2Q99626 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC2.29□□□□□ -2.04
CDX2Q99626 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.29□□□□□ -2.04
CDX2Q99626 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC2.29□□□□□ -2.04
CDX2Q99626 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC2.29□□□□□ -2.04
CDX2Q99626 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.29□□□□□ -2.04
CDX2Q99626 AL356280.1-201ENST00000603614 379 ntBASIC2.29□□□□□ -2.04
CDX2Q99626 AC004853.1-201ENST00000604902 698 ntBASIC2.29□□□□□ -2.04
CDX2Q99626 AL139022.2-201ENST00000606934 443 ntBASIC2.29□□□□□ -2.04
CDX2Q99626 AC018645.2-201ENST00000609151 472 ntBASIC2.29□□□□□ -2.04
CDX2Q99626 AC106028.5-201ENST00000610332 395 ntBASIC2.29□□□□□ -2.04
CDX2Q99626 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.29□□□□□ -2.04
CDX2Q99626 AC104763.3-201ENST00000613765 618 ntBASIC2.29□□□□□ -2.04
CDX2Q99626 AL138880.2-201ENST00000616214 239 ntBASIC2.29□□□□□ -2.04
CDX2Q99626 AC108479.2-201ENST00000617314 601 ntBASIC2.29□□□□□ -2.04
CDX2Q99626 AC022306.3-201ENST00000619930 550 ntBASIC2.29□□□□□ -2.04
CDX2Q99626 MIR6132-201ENST00000622083 109 ntBASIC2.29□□□□□ -2.04
CDX2Q99626 AL049777.1-201ENST00000622740 518 ntBASIC2.29□□□□□ -2.04
CDX2Q99626 AL356266.1-201ENST00000623311 483 ntBASIC2.29□□□□□ -2.04
CDX2Q99626 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
CDX2Q99626 AC080100.1-201ENST00000624239 5356 ntBASIC2.28□□□□□ -2.04
CDX2Q99626 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
CDX2Q99626 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
CDX2Q99626 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC2.28□□□□□ -2.04
CDX2Q99626 U8.10-201ENST00000384260 133 ntBASIC2.28□□□□□ -2.04
CDX2Q99626 MIR493-201ENST00000385254 89 ntBASIC2.28□□□□□ -2.04
CDX2Q99626 RPS4XP3-201ENST00000398541 413 ntBASIC2.28□□□□□ -2.04
CDX2Q99626 AL356131.1-201ENST00000405826 414 ntBASIC2.28□□□□□ -2.04
CDX2Q99626 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.28□□□□□ -2.04
CDX2Q99626 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
CDX2Q99626 MRPS36P1-201ENST00000421291 307 ntBASIC2.28□□□□□ -2.04
CDX2Q99626 BEND7P1-201ENST00000422058 457 ntBASIC2.28□□□□□ -2.04
CDX2Q99626 AC019178.2-201ENST00000423595 505 ntBASIC2.28□□□□□ -2.04
CDX2Q99626 MTCYBP45-201ENST00000435243 565 ntBASIC2.28□□□□□ -2.04
CDX2Q99626 RPL23AP76-201ENST00000441860 458 ntBASIC2.28□□□□□ -2.04
CDX2Q99626 AL589880.1-201ENST00000448271 287 ntBASIC2.28□□□□□ -2.04
CDX2Q99626 OFD1P3Y-201ENST00000453312 783 ntBASIC2.28□□□□□ -2.04
CDX2Q99626 RN7SL297P-201ENST00000483161 293 ntBASIC2.28□□□□□ -2.04
CDX2Q99626 RPL23AP63-201ENST00000498752 471 ntBASIC2.28□□□□□ -2.04
CDX2Q99626 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC2.28□□□□□ -2.04
CDX2Q99626 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC2.28□□□□□ -2.04
CDX2Q99626 AC114322.1-201ENST00000506771 926 ntBASIC2.28□□□□□ -2.04
CDX2Q99626 HMGB1P28-201ENST00000507778 552 ntBASIC2.28□□□□□ -2.04
CDX2Q99626 AC113420.1-201ENST00000507903 571 ntBASIC2.28□□□□□ -2.04
CDX2Q99626 AC113347.3-201ENST00000509113 148 ntBASIC2.28□□□□□ -2.04
CDX2Q99626 RAC1P5-201ENST00000512182 576 ntBASIC2.28□□□□□ -2.04
CDX2Q99626 AC093677.1-201ENST00000514414 678 ntBASIC2.28□□□□□ -2.04
CDX2Q99626 SNORA19.3-201ENST00000516165 130 ntBASIC2.28□□□□□ -2.04
CDX2Q99626 RPPH1-2P-201ENST00000516688 293 ntBASIC2.28□□□□□ -2.04
CDX2Q99626 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC2.28□□□□□ -2.04
CDX2Q99626 OR10V3P-201ENST00000525712 725 ntBASIC2.28□□□□□ -2.04
CDX2Q99626 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC2.28□□□□□ -2.04
CDX2Q99626 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC2.28□□□□□ -2.04
CDX2Q99626 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC2.28□□□□□ -2.04
CDX2Q99626 AC010546.1-201ENST00000569391 485 ntBASIC2.28□□□□□ -2.04
CDX2Q99626 MTND3P13-201ENST00000574391 343 ntBASIC2.28□□□□□ -2.04
CDX2Q99626 AL161734.1-201ENST00000609720 557 ntBASIC2.28□□□□□ -2.04
CDX2Q99626 AL391834.2-201ENST00000609982 546 ntBASIC2.28□□□□□ -2.04
CDX2Q99626 AC140725.3-201ENST00000616193 880 ntBASIC2.28□□□□□ -2.04
CDX2Q99626 SNHG22-203ENST00000617833 660 ntBASIC2.28□□□□□ -2.04
CDX2Q99626 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC2.28□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms