Protein–RNA interactions for Protein: Q96M19

LINC00477, Putative transmembrane protein encoded by LINC00477, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00477Q96M19 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
LINC00477Q96M19 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
LINC00477Q96M19 Y_RNA.18-201ENST00000362461 102 ntBASIC2.06□□□□□ -2.08
LINC00477Q96M19 Y_RNA.46-201ENST00000362695 102 ntBASIC2.06□□□□□ -2.08
LINC00477Q96M19 RNU6-97P-201ENST00000363387 104 ntBASIC2.06□□□□□ -2.08
LINC00477Q96M19 SNORA67.1-201ENST00000364749 141 ntBASIC2.06□□□□□ -2.08
LINC00477Q96M19 RPS20P2-201ENST00000402520 389 ntBASIC2.06□□□□□ -2.08
LINC00477Q96M19 MIR1290-201ENST00000408735 78 ntBASIC2.06□□□□□ -2.08
LINC00477Q96M19 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC2.06□□□□□ -2.08
LINC00477Q96M19 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC2.06□□□□□ -2.08
LINC00477Q96M19 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC2.06□□□□□ -2.08
LINC00477Q96M19 AL592148.1-201ENST00000413568 445 ntBASIC2.06□□□□□ -2.08
LINC00477Q96M19 NPM1P11-201ENST00000417106 855 ntBASIC2.06□□□□□ -2.08
LINC00477Q96M19 MTND2P18-201ENST00000419962 1030 ntBASIC2.06□□□□□ -2.08
LINC00477Q96M19 BEND7P1-201ENST00000422058 457 ntBASIC2.06□□□□□ -2.08
LINC00477Q96M19 AL389915.1-201ENST00000422463 466 ntBASIC2.06□□□□□ -2.08
LINC00477Q96M19 PPP1R11P2-201ENST00000423543 382 ntBASIC2.06□□□□□ -2.08
LINC00477Q96M19 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC2.06□□□□□ -2.08
LINC00477Q96M19 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC2.06□□□□□ -2.08
LINC00477Q96M19 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.06□□□□□ -2.08
LINC00477Q96M19 CETN4P-201ENST00000432407 469 ntBASIC2.06□□□□□ -2.08
LINC00477Q96M19 UBE2FP3-201ENST00000436366 524 ntBASIC2.06□□□□□ -2.08
LINC00477Q96M19 AL512286.1-201ENST00000439244 400 ntBASIC2.06□□□□□ -2.08
LINC00477Q96M19 RPS15AP7-201ENST00000439294 405 ntBASIC2.06□□□□□ -2.08
LINC00477Q96M19 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC2.06□□□□□ -2.08
LINC00477Q96M19 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC2.06□□□□□ -2.08
LINC00477Q96M19 AC233279.1-201ENST00000455300 423 ntBASIC2.06□□□□□ -2.08
LINC00477Q96M19 snoU13.8-201ENST00000458890 104 ntBASIC2.06□□□□□ -2.08
LINC00477Q96M19 AC087588.1-201ENST00000462203 316 ntBASIC2.06□□□□□ -2.08
LINC00477Q96M19 RPL23AP70-201ENST00000483361 460 ntBASIC2.06□□□□□ -2.08
LINC00477Q96M19 RPL9P33-201ENST00000484311 566 ntBASIC2.06□□□□□ -2.08
LINC00477Q96M19 RPL30P5-201ENST00000494923 336 ntBASIC2.06□□□□□ -2.08
LINC00477Q96M19 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.06□□□□□ -2.08
LINC00477Q96M19 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC2.06□□□□□ -2.08
LINC00477Q96M19 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC2.06□□□□□ -2.08
LINC00477Q96M19 LEF1-218ENST00000512172 598 ntTSL 2 BASIC2.06□□□□□ -2.08
LINC00477Q96M19 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.06□□□□□ -2.08
LINC00477Q96M19 AP002748.2-201ENST00000528671 348 ntBASIC2.06□□□□□ -2.08
LINC00477Q96M19 OR4R1P-201ENST00000529879 463 ntBASIC2.06□□□□□ -2.08
LINC00477Q96M19 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC2.06□□□□□ -2.08
LINC00477Q96M19 EMP1-206ENST00000537612 505 ntTSL 3 BASIC2.06□□□□□ -2.08
LINC00477Q96M19 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC2.06□□□□□ -2.08
LINC00477Q96M19 OSBPL9P5-201ENST00000542581 171 ntBASIC2.06□□□□□ -2.08
LINC00477Q96M19 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC2.06□□□□□ -2.08
LINC00477Q96M19 AC123904.2-201ENST00000548059 300 ntBASIC2.06□□□□□ -2.08
LINC00477Q96M19 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC2.06□□□□□ -2.08
LINC00477Q96M19 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC2.06□□□□□ -2.08
LINC00477Q96M19 ZNF519P3-201ENST00000557158 1032 ntBASIC2.06□□□□□ -2.08
LINC00477Q96M19 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC2.06□□□□□ -2.08
LINC00477Q96M19 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC2.06□□□□□ -2.08
LINC00477Q96M19 MIR5697-201ENST00000578045 78 ntBASIC2.06□□□□□ -2.08
LINC00477Q96M19 MIR3616-201ENST00000584070 92 ntBASIC2.06□□□□□ -2.08
LINC00477Q96M19 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.06□□□□□ -2.08
LINC00477Q96M19 CLIC4P2-201ENST00000601934 717 ntBASIC2.06□□□□□ -2.08
LINC00477Q96M19 AC013444.2-201ENST00000603317 787 ntBASIC2.06□□□□□ -2.08
LINC00477Q96M19 AC024220.1-201ENST00000603675 484 ntBASIC2.06□□□□□ -2.08
LINC00477Q96M19 AL357094.1-201ENST00000603845 844 ntBASIC2.06□□□□□ -2.08
LINC00477Q96M19 AC012468.1-201ENST00000604888 430 ntBASIC2.06□□□□□ -2.08
LINC00477Q96M19 AC091965.4-201ENST00000607691 587 ntBASIC2.06□□□□□ -2.08
LINC00477Q96M19 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC2.06□□□□□ -2.08
LINC00477Q96M19 AF246928.1-201ENST00000623768 87 ntBASIC2.06□□□□□ -2.08
LINC00477Q96M19 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC2.06□□□□□ -2.08
LINC00477Q96M19 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
LINC00477Q96M19 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC2.06□□□□□ -2.08
LINC00477Q96M19 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
LINC00477Q96M19 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
LINC00477Q96M19 AC092125.1-201ENST00000562568 1995 ntBASIC2.05□□□□□ -2.08
LINC00477Q96M19 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC2.05□□□□□ -2.08
LINC00477Q96M19 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
LINC00477Q96M19 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
LINC00477Q96M19 AL161781.1-201ENST00000354277 403 ntBASIC2.05□□□□□ -2.08
LINC00477Q96M19 RNU4-21P-201ENST00000362802 126 ntBASIC2.05□□□□□ -2.08
LINC00477Q96M19 SNORA36C-201ENST00000384289 132 ntBASIC2.05□□□□□ -2.08
LINC00477Q96M19 MIR19A-201ENST00000384878 82 ntBASIC2.05□□□□□ -2.08
LINC00477Q96M19 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
LINC00477Q96M19 SNORA48.5-201ENST00000391143 135 ntBASIC2.05□□□□□ -2.08
LINC00477Q96M19 RNU6-1197P-201ENST00000391183 107 ntBASIC2.05□□□□□ -2.08
LINC00477Q96M19 CASP3-203ENST00000393588 677 ntTSL 4 BASIC2.05□□□□□ -2.08
LINC00477Q96M19 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.05□□□□□ -2.08
LINC00477Q96M19 ERMN-204ENST00000409925 556 ntTSL 4 BASIC2.05□□□□□ -2.08
LINC00477Q96M19 USP9YP13-201ENST00000417797 480 ntBASIC2.05□□□□□ -2.08
LINC00477Q96M19 AC091390.3-201ENST00000426478 338 ntBASIC2.05□□□□□ -2.08
LINC00477Q96M19 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC2.05□□□□□ -2.08
LINC00477Q96M19 AL512649.1-201ENST00000428997 581 ntBASIC2.05□□□□□ -2.08
LINC00477Q96M19 RPL36AP6-201ENST00000435770 321 ntBASIC2.05□□□□□ -2.08
LINC00477Q96M19 SNRPEP7-201ENST00000438350 220 ntBASIC2.05□□□□□ -2.08
LINC00477Q96M19 AL031667.1-201ENST00000440222 725 ntBASIC2.05□□□□□ -2.08
LINC00477Q96M19 AC112653.1-201ENST00000443851 386 ntBASIC2.05□□□□□ -2.08
LINC00477Q96M19 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC2.05□□□□□ -2.08
LINC00477Q96M19 AC011753.1-201ENST00000451001 220 ntBASIC2.05□□□□□ -2.08
LINC00477Q96M19 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC2.05□□□□□ -2.08
LINC00477Q96M19 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC2.05□□□□□ -2.08
LINC00477Q96M19 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC2.05□□□□□ -2.08
LINC00477Q96M19 RPL31P60-201ENST00000478450 367 ntBASIC2.05□□□□□ -2.08
LINC00477Q96M19 BET1P1-201ENST00000482276 359 ntBASIC2.05□□□□□ -2.08
LINC00477Q96M19 MRPL42P6-201ENST00000486397 371 ntBASIC2.05□□□□□ -2.08
LINC00477Q96M19 AC109486.1-201ENST00000486833 374 ntBASIC2.05□□□□□ -2.08
LINC00477Q96M19 RPS15AP34-201ENST00000487776 387 ntBASIC2.05□□□□□ -2.08
LINC00477Q96M19 AC055855.1-201ENST00000489563 579 ntBASIC2.05□□□□□ -2.08
LINC00477Q96M19 RPS27P26-201ENST00000494583 239 ntBASIC2.05□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 119.3 ms