Protein–RNA interactions for Protein: Q8WXE1

ATRIP, ATR-interacting protein, humanhuman

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATRIPQ8WXE1 AC024614.3-201ENST00000637860 256 ntBASIC4.09□□□□□ -1.75
ATRIPQ8WXE1 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.76
ATRIPQ8WXE1 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
ATRIPQ8WXE1 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.08□□□□□ -1.76
ATRIPQ8WXE1 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
ATRIPQ8WXE1 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
ATRIPQ8WXE1 RNU6-451P-201ENST00000362921 107 ntBASIC4.08□□□□□ -1.76
ATRIPQ8WXE1 SNORD56.2-201ENST00000363242 71 ntBASIC4.08□□□□□ -1.76
ATRIPQ8WXE1 RNY3P3-201ENST00000363816 102 ntBASIC4.08□□□□□ -1.76
ATRIPQ8WXE1 RNY3P13-201ENST00000365542 102 ntBASIC4.08□□□□□ -1.76
ATRIPQ8WXE1 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
ATRIPQ8WXE1 RNU6-1158P-201ENST00000391167 107 ntBASIC4.08□□□□□ -1.76
ATRIPQ8WXE1 SNORA3.3-201ENST00000408712 125 ntBASIC4.08□□□□□ -1.76
ATRIPQ8WXE1 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC4.08□□□□□ -1.76
ATRIPQ8WXE1 MTCO3P12-201ENST00000416718 547 ntBASIC4.08□□□□□ -1.76
ATRIPQ8WXE1 MRPL50P2-201ENST00000416821 482 ntBASIC4.08□□□□□ -1.76
ATRIPQ8WXE1 MTND4P28-201ENST00000426217 387 ntBASIC4.08□□□□□ -1.76
ATRIPQ8WXE1 IGKV1OR9-2-201ENST00000431378 277 ntBASIC4.08□□□□□ -1.76
ATRIPQ8WXE1 GPR143P-201ENST00000434155 205 ntBASIC4.08□□□□□ -1.76
ATRIPQ8WXE1 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.08□□□□□ -1.76
ATRIPQ8WXE1 AMD1P1-201ENST00000457220 922 ntBASIC4.08□□□□□ -1.76
ATRIPQ8WXE1 AP000852.1-201ENST00000472460 573 ntBASIC4.08□□□□□ -1.76
ATRIPQ8WXE1 AC083798.1-201ENST00000472671 131 ntBASIC4.08□□□□□ -1.76
ATRIPQ8WXE1 MTCO2P30-201ENST00000503662 364 ntBASIC4.08□□□□□ -1.76
ATRIPQ8WXE1 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC4.08□□□□□ -1.76
ATRIPQ8WXE1 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC4.08□□□□□ -1.76
ATRIPQ8WXE1 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC4.08□□□□□ -1.76
ATRIPQ8WXE1 RNU1-61P-201ENST00000516107 151 ntBASIC4.08□□□□□ -1.76
ATRIPQ8WXE1 RNU6-835P-201ENST00000516974 104 ntBASIC4.08□□□□□ -1.76
ATRIPQ8WXE1 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC4.08□□□□□ -1.76
ATRIPQ8WXE1 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC4.08□□□□□ -1.76
ATRIPQ8WXE1 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.08□□□□□ -1.76
ATRIPQ8WXE1 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC4.08□□□□□ -1.76
ATRIPQ8WXE1 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC4.08□□□□□ -1.76
ATRIPQ8WXE1 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC4.08□□□□□ -1.76
ATRIPQ8WXE1 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC4.08□□□□□ -1.76
ATRIPQ8WXE1 OR4T1P-201ENST00000554933 911 ntBASIC4.08□□□□□ -1.76
ATRIPQ8WXE1 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC4.08□□□□□ -1.76
ATRIPQ8WXE1 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC4.08□□□□□ -1.76
ATRIPQ8WXE1 MIR4738-201ENST00000579134 87 ntBASIC4.08□□□□□ -1.76
ATRIPQ8WXE1 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC4.08□□□□□ -1.76
ATRIPQ8WXE1 KC877982.1-201ENST00000602313 470 ntBASIC4.08□□□□□ -1.76
ATRIPQ8WXE1 C8orf59P2-201ENST00000603441 271 ntBASIC4.08□□□□□ -1.76
ATRIPQ8WXE1 AL137849.1-201ENST00000604767 169 ntBASIC4.08□□□□□ -1.76
ATRIPQ8WXE1 AC245517.5-201ENST00000611529 162 ntBASIC4.08□□□□□ -1.76
ATRIPQ8WXE1 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
ATRIPQ8WXE1 AC099654.5-201ENST00000636479 350 ntBASIC4.08□□□□□ -1.76
ATRIPQ8WXE1 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
ATRIPQ8WXE1 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC4.07□□□□□ -1.76
ATRIPQ8WXE1 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
ATRIPQ8WXE1 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
ATRIPQ8WXE1 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC4.07□□□□□ -1.76
ATRIPQ8WXE1 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC4.07□□□□□ -1.76
ATRIPQ8WXE1 ZNF680P1-201ENST00000436625 1469 ntBASIC4.07□□□□□ -1.76
ATRIPQ8WXE1 OR1S2-201ENST00000302592 978 ntBASIC4.07□□□□□ -1.76
ATRIPQ8WXE1 RNU6-1120P-201ENST00000362988 108 ntBASIC4.07□□□□□ -1.76
ATRIPQ8WXE1 RNU5A-8P-201ENST00000364102 114 ntBASIC4.07□□□□□ -1.76
ATRIPQ8WXE1 RNY1P12-201ENST00000364251 105 ntBASIC4.07□□□□□ -1.76
ATRIPQ8WXE1 RNA5SP97-201ENST00000365006 84 ntBASIC4.07□□□□□ -1.76
ATRIPQ8WXE1 RNU6-108P-201ENST00000365558 107 ntBASIC4.07□□□□□ -1.76
ATRIPQ8WXE1 MIR183-201ENST00000384958 110 ntBASIC4.07□□□□□ -1.76
ATRIPQ8WXE1 AL591416.1-201ENST00000404015 867 ntBASIC4.07□□□□□ -1.76
ATRIPQ8WXE1 OR9R1P-201ENST00000412200 877 ntBASIC4.07□□□□□ -1.76
ATRIPQ8WXE1 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC4.07□□□□□ -1.76
ATRIPQ8WXE1 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC4.07□□□□□ -1.76
ATRIPQ8WXE1 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC4.07□□□□□ -1.76
ATRIPQ8WXE1 HMGN2P20-201ENST00000437531 273 ntBASIC4.07□□□□□ -1.76
ATRIPQ8WXE1 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC4.07□□□□□ -1.76
ATRIPQ8WXE1 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC4.07□□□□□ -1.76
ATRIPQ8WXE1 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC4.07□□□□□ -1.76
ATRIPQ8WXE1 NANOGP10-201ENST00000453325 895 ntBASIC4.07□□□□□ -1.76
ATRIPQ8WXE1 MTND1P9-201ENST00000453775 944 ntBASIC4.07□□□□□ -1.76
ATRIPQ8WXE1 ST13P14-201ENST00000474095 734 ntBASIC4.07□□□□□ -1.76
ATRIPQ8WXE1 AC012181.1-201ENST00000479895 423 ntBASIC4.07□□□□□ -1.76
ATRIPQ8WXE1 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC4.07□□□□□ -1.76
ATRIPQ8WXE1 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC4.07□□□□□ -1.76
ATRIPQ8WXE1 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC4.07□□□□□ -1.76
ATRIPQ8WXE1 AC008489.1-201ENST00000524271 483 ntBASIC4.07□□□□□ -1.76
ATRIPQ8WXE1 AP003072.2-201ENST00000527756 676 ntBASIC4.07□□□□□ -1.76
ATRIPQ8WXE1 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC4.07□□□□□ -1.76
ATRIPQ8WXE1 AC091516.1-201ENST00000549191 703 ntBASIC4.07□□□□□ -1.76
ATRIPQ8WXE1 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC4.07□□□□□ -1.76
ATRIPQ8WXE1 MIR4474-201ENST00000579189 78 ntBASIC4.07□□□□□ -1.76
ATRIPQ8WXE1 MIR5047-201ENST00000579212 100 ntBASIC4.07□□□□□ -1.76
ATRIPQ8WXE1 UBE2V2P2-201ENST00000587677 504 ntBASIC4.07□□□□□ -1.76
ATRIPQ8WXE1 AL356055.1-201ENST00000602528 446 ntBASIC4.07□□□□□ -1.76
ATRIPQ8WXE1 AC006254.3-201ENST00000603353 884 ntBASIC4.07□□□□□ -1.76
ATRIPQ8WXE1 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC4.07□□□□□ -1.76
ATRIPQ8WXE1 U6.105-201ENST00000637379 88 ntBASIC4.07□□□□□ -1.76
ATRIPQ8WXE1 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
ATRIPQ8WXE1 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC4.06□□□□□ -1.76
ATRIPQ8WXE1 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC4.06□□□□□ -1.76
ATRIPQ8WXE1 Y_RNA.61-201ENST00000362835 102 ntBASIC4.06□□□□□ -1.76
ATRIPQ8WXE1 Y_RNA.86-201ENST00000363020 111 ntBASIC4.06□□□□□ -1.76
ATRIPQ8WXE1 SNORA69-201ENST00000383895 132 ntBASIC4.06□□□□□ -1.76
ATRIPQ8WXE1 RNU6-39P-201ENST00000384344 107 ntBASIC4.06□□□□□ -1.76
ATRIPQ8WXE1 MIR199A2-201ENST00000385289 110 ntBASIC4.06□□□□□ -1.76
ATRIPQ8WXE1 RNU6-1068P-201ENST00000410958 103 ntBASIC4.06□□□□□ -1.76
ATRIPQ8WXE1 OR1AA1P-201ENST00000419597 916 ntBASIC4.06□□□□□ -1.76
ATRIPQ8WXE1 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 179.8 ms