Protein–RNA interactions for Protein: Q70EL4

USP43, Ubiquitin carboxyl-terminal hydrolase 43, humanhuman

Predictions only

Length 1,123 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP43Q70EL4 AC048347.1-201ENST00000624621 427 ntBASIC3.36□□□□□ -1.87
USP43Q70EL4 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC3.36□□□□□ -1.87
USP43Q70EL4 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.36□□□□□ -1.87
USP43Q70EL4 TPTEP1-208ENST00000636884 213 ntBASIC3.36□□□□□ -1.87
USP43Q70EL4 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
USP43Q70EL4 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
USP43Q70EL4 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.36□□□□□ -1.87
USP43Q70EL4 AP002907.1-201ENST00000606361 1430 ntBASIC3.36□□□□□ -1.87
USP43Q70EL4 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
USP43Q70EL4 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.35□□□□□ -1.87
USP43Q70EL4 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.35□□□□□ -1.87
USP43Q70EL4 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
USP43Q70EL4 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC3.35□□□□□ -1.87
USP43Q70EL4 OR5J1P-201ENST00000313544 939 ntBASIC3.35□□□□□ -1.87
USP43Q70EL4 RNU6-282P-201ENST00000365357 103 ntBASIC3.35□□□□□ -1.87
USP43Q70EL4 MIR7-3-201ENST00000384898 110 ntBASIC3.35□□□□□ -1.87
USP43Q70EL4 Y_RNA.579-201ENST00000390939 94 ntBASIC3.35□□□□□ -1.87
USP43Q70EL4 DHFRP6-201ENST00000401776 268 ntBASIC3.35□□□□□ -1.87
USP43Q70EL4 AL356057.3-201ENST00000402607 340 ntBASIC3.35□□□□□ -1.87
USP43Q70EL4 RPL5P18-201ENST00000406671 891 ntBASIC3.35□□□□□ -1.87
USP43Q70EL4 RN7SKP32-201ENST00000410167 303 ntBASIC3.35□□□□□ -1.87
USP43Q70EL4 Y_RNA.605-201ENST00000410577 105 ntBASIC3.35□□□□□ -1.87
USP43Q70EL4 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC3.35□□□□□ -1.87
USP43Q70EL4 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC3.35□□□□□ -1.87
USP43Q70EL4 BX679664.1-201ENST00000434429 253 ntBASIC3.35□□□□□ -1.87
USP43Q70EL4 YWHAZP8-201ENST00000436935 731 ntBASIC3.35□□□□□ -1.87
USP43Q70EL4 SNORD19B-201ENST00000459623 84 ntBASIC3.35□□□□□ -1.87
USP43Q70EL4 AC026410.2-201ENST00000460281 156 ntBASIC3.35□□□□□ -1.87
USP43Q70EL4 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC3.35□□□□□ -1.87
USP43Q70EL4 RPS15AP36-201ENST00000492022 382 ntBASIC3.35□□□□□ -1.87
USP43Q70EL4 AC020893.1-201ENST00000502452 580 ntBASIC3.35□□□□□ -1.87
USP43Q70EL4 RNU6-445P-201ENST00000516949 107 ntBASIC3.35□□□□□ -1.87
USP43Q70EL4 RNU6-201P-201ENST00000517100 61 ntBASIC3.35□□□□□ -1.87
USP43Q70EL4 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC3.35□□□□□ -1.87
USP43Q70EL4 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC3.35□□□□□ -1.87
USP43Q70EL4 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC3.35□□□□□ -1.87
USP43Q70EL4 COX6CP5-201ENST00000527162 228 ntBASIC3.35□□□□□ -1.87
USP43Q70EL4 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC3.35□□□□□ -1.87
USP43Q70EL4 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC3.35□□□□□ -1.87
USP43Q70EL4 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC3.35□□□□□ -1.87
USP43Q70EL4 ZNF192P1-203ENST00000565888 810 ntBASIC3.35□□□□□ -1.87
USP43Q70EL4 AC055876.1-202ENST00000567053 138 ntBASIC3.35□□□□□ -1.87
USP43Q70EL4 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC3.35□□□□□ -1.87
USP43Q70EL4 LARP7P2-201ENST00000575306 125 ntBASIC3.35□□□□□ -1.87
USP43Q70EL4 AC243960.4-201ENST00000600532 288 ntBASIC3.35□□□□□ -1.87
USP43Q70EL4 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC3.35□□□□□ -1.87
USP43Q70EL4 AC012507.3-201ENST00000603556 477 ntBASIC3.35□□□□□ -1.87
USP43Q70EL4 RNU6-87P-201ENST00000607561 108 ntBASIC3.35□□□□□ -1.87
USP43Q70EL4 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC3.35□□□□□ -1.87
USP43Q70EL4 AC068722.2-201ENST00000618734 544 ntBASIC3.35□□□□□ -1.87
USP43Q70EL4 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
USP43Q70EL4 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.35□□□□□ -1.87
USP43Q70EL4 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.35□□□□□ -1.87
USP43Q70EL4 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC3.34□□□□□ -1.87
USP43Q70EL4 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
USP43Q70EL4 AC004972.1-201ENST00000623934 2209 ntBASIC3.34□□□□□ -1.87
USP43Q70EL4 RPL23AP57-201ENST00000332361 466 ntBASIC3.34□□□□□ -1.87
USP43Q70EL4 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
USP43Q70EL4 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC3.34□□□□□ -1.87
USP43Q70EL4 SNORA71.3-201ENST00000362582 128 ntBASIC3.34□□□□□ -1.87
USP43Q70EL4 Y_RNA.46-201ENST00000362695 102 ntBASIC3.34□□□□□ -1.87
USP43Q70EL4 Y_RNA.184-201ENST00000363884 108 ntBASIC3.34□□□□□ -1.87
USP43Q70EL4 Y_RNA.202-201ENST00000364083 110 ntBASIC3.34□□□□□ -1.87
USP43Q70EL4 RNU6-343P-201ENST00000364709 104 ntBASIC3.34□□□□□ -1.87
USP43Q70EL4 RNU1-39P-201ENST00000383897 165 ntBASIC3.34□□□□□ -1.87
USP43Q70EL4 RNU6-1293P-201ENST00000384077 107 ntBASIC3.34□□□□□ -1.87
USP43Q70EL4 RNU6-74P-201ENST00000384235 107 ntBASIC3.34□□□□□ -1.87
USP43Q70EL4 RNU6-921P-201ENST00000384361 107 ntBASIC3.34□□□□□ -1.87
USP43Q70EL4 Y_RNA.481-201ENST00000384373 102 ntBASIC3.34□□□□□ -1.87
USP43Q70EL4 RNU2-62P-201ENST00000410868 191 ntBASIC3.34□□□□□ -1.87
USP43Q70EL4 AL359704.1-201ENST00000411586 781 ntBASIC3.34□□□□□ -1.87
USP43Q70EL4 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC3.34□□□□□ -1.87
USP43Q70EL4 TEX41-204ENST00000423031 491 ntTSL 4 BASIC3.34□□□□□ -1.87
USP43Q70EL4 RPL23AP69-201ENST00000431134 458 ntBASIC3.34□□□□□ -1.87
USP43Q70EL4 AL365400.1-201ENST00000431854 640 ntBASIC3.34□□□□□ -1.87
USP43Q70EL4 RPL36AP53-201ENST00000432891 316 ntBASIC3.34□□□□□ -1.87
USP43Q70EL4 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC3.34□□□□□ -1.87
USP43Q70EL4 AC006480.1-201ENST00000449887 378 ntBASIC3.34□□□□□ -1.87
USP43Q70EL4 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.34□□□□□ -1.87
USP43Q70EL4 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC3.34□□□□□ -1.87
USP43Q70EL4 MTND1P12-201ENST00000455231 147 ntBASIC3.34□□□□□ -1.87
USP43Q70EL4 RPL21P11-201ENST00000461458 483 ntBASIC3.34□□□□□ -1.87
USP43Q70EL4 MTCO2P29-201ENST00000465212 189 ntBASIC3.34□□□□□ -1.87
USP43Q70EL4 AL163540.1-201ENST00000485382 386 ntBASIC3.34□□□□□ -1.87
USP43Q70EL4 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
USP43Q70EL4 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
USP43Q70EL4 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC3.34□□□□□ -1.87
USP43Q70EL4 RNA5SP208-201ENST00000516156 78 ntBASIC3.34□□□□□ -1.87
USP43Q70EL4 Y_RNA.691-201ENST00000516611 103 ntBASIC3.34□□□□□ -1.87
USP43Q70EL4 SOD1P3-201ENST00000518682 454 ntBASIC3.34□□□□□ -1.87
USP43Q70EL4 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC3.34□□□□□ -1.87
USP43Q70EL4 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC3.34□□□□□ -1.87
USP43Q70EL4 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC3.34□□□□□ -1.87
USP43Q70EL4 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC3.34□□□□□ -1.87
USP43Q70EL4 OR4H12P-201ENST00000556269 907 ntBASIC3.34□□□□□ -1.87
USP43Q70EL4 AC110588.1-201ENST00000559699 137 ntBASIC3.34□□□□□ -1.87
USP43Q70EL4 MIR5186-201ENST00000577504 120 ntBASIC3.34□□□□□ -1.87
USP43Q70EL4 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC3.34□□□□□ -1.87
USP43Q70EL4 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.34□□□□□ -1.87
USP43Q70EL4 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms