Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 AC068050.1-201ENST00000394891 380 ntBASIC0.64□□□□□ -2.31
VPS13DQ5THJ4 CBX3P6-201ENST00000430257 527 ntBASIC0.64□□□□□ -2.31
VPS13DQ5THJ4 CASP3P1-201ENST00000446037 609 ntBASIC0.64□□□□□ -2.31
VPS13DQ5THJ4 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC0.64□□□□□ -2.31
VPS13DQ5THJ4 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC0.64□□□□□ -2.31
VPS13DQ5THJ4 AC008676.3-201ENST00000521237 435 ntBASIC0.64□□□□□ -2.31
VPS13DQ5THJ4 MTCYBP23-201ENST00000558717 1102 ntBASIC0.64□□□□□ -2.31
VPS13DQ5THJ4 SULT1C2P1-202ENST00000562418 459 ntBASIC0.64□□□□□ -2.31
VPS13DQ5THJ4 AL138955.1-201ENST00000622881 1040 ntBASIC0.64□□□□□ -2.31
VPS13DQ5THJ4 AC007342.9-201ENST00000623877 1385 ntBASIC0.64□□□□□ -2.31
VPS13DQ5THJ4 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC0.64□□□□□ -2.31
VPS13DQ5THJ4 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC0.64□□□□□ -2.31
VPS13DQ5THJ4 AC093752.1-206ENST00000511823 336 ntBASIC0.64□□□□□ -2.31
VPS13DQ5THJ4 AC091965.2-201ENST00000512324 613 ntBASIC0.64□□□□□ -2.31
VPS13DQ5THJ4 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC0.64□□□□□ -2.31
VPS13DQ5THJ4 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC0.64□□□□□ -2.31
VPS13DQ5THJ4 ZNF736P3Y-201ENST00000428264 1465 ntBASIC0.63□□□□□ -2.31
VPS13DQ5THJ4 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC0.63□□□□□ -2.31
VPS13DQ5THJ4 OFD1P12Y-201ENST00000427963 1207 ntBASIC0.63□□□□□ -2.31
VPS13DQ5THJ4 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC0.63□□□□□ -2.31
VPS13DQ5THJ4 RNU6-970P-201ENST00000516312 107 ntBASIC0.63□□□□□ -2.31
VPS13DQ5THJ4 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC0.63□□□□□ -2.31
VPS13DQ5THJ4 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC0.63□□□□□ -2.31
VPS13DQ5THJ4 MTND5P9-201ENST00000503854 1755 ntBASIC0.63□□□□□ -2.31
VPS13DQ5THJ4 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC0.63□□□□□ -2.31
VPS13DQ5THJ4 AC096533.1-201ENST00000411645 353 ntBASIC0.63□□□□□ -2.31
VPS13DQ5THJ4 ZNF90P2-204ENST00000419323 1075 ntBASIC0.63□□□□□ -2.31
VPS13DQ5THJ4 ELOCP6-201ENST00000429066 328 ntBASIC0.63□□□□□ -2.31
VPS13DQ5THJ4 SNRPEP4-201ENST00000435815 279 ntBASIC0.63□□□□□ -2.31
VPS13DQ5THJ4 ARL5AP3-201ENST00000439327 386 ntBASIC0.63□□□□□ -2.31
VPS13DQ5THJ4 ELOCP12-201ENST00000458706 328 ntBASIC0.63□□□□□ -2.31
VPS13DQ5THJ4 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC0.63□□□□□ -2.31
VPS13DQ5THJ4 U8.14-201ENST00000390843 143 ntBASIC0.63□□□□□ -2.31
VPS13DQ5THJ4 NUP35P2-201ENST00000416748 943 ntBASIC0.63□□□□□ -2.31
VPS13DQ5THJ4 AL591212.2-201ENST00000433923 257 ntBASIC0.63□□□□□ -2.31
VPS13DQ5THJ4 COX6CP18-201ENST00000448769 222 ntBASIC0.63□□□□□ -2.31
VPS13DQ5THJ4 AC027575.1-201ENST00000481064 460 ntBASIC0.63□□□□□ -2.31
VPS13DQ5THJ4 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC0.63□□□□□ -2.31
VPS13DQ5THJ4 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC0.63□□□□□ -2.31
VPS13DQ5THJ4 MIR3690-201ENST00000580266 75 ntBASIC0.63□□□□□ -2.31
VPS13DQ5THJ4 AC008133.2-201ENST00000624540 351 ntBASIC0.63□□□□□ -2.31
VPS13DQ5THJ4 RNF6P1-201ENST00000444889 1784 ntBASIC0.63□□□□□ -2.31
VPS13DQ5THJ4 MIR147B-201ENST00000390185 80 ntBASIC0.62□□□□□ -2.31
VPS13DQ5THJ4 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC0.62□□□□□ -2.31
VPS13DQ5THJ4 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC0.62□□□□□ -2.31
VPS13DQ5THJ4 MIR330-201ENST00000362196 94 ntBASIC0.62□□□□□ -2.31
VPS13DQ5THJ4 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC0.62□□□□□ -2.31
VPS13DQ5THJ4 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC0.62□□□□□ -2.31
VPS13DQ5THJ4 AC096751.1-202ENST00000502691 1067 ntBASIC0.62□□□□□ -2.31
VPS13DQ5THJ4 AC009901.1-201ENST00000506703 541 ntBASIC0.62□□□□□ -2.31
VPS13DQ5THJ4 AL109933.3-201ENST00000619095 188 ntBASIC0.62□□□□□ -2.31
VPS13DQ5THJ4 GS1-279B7.1-204ENST00000641809 378 ntBASIC0.62□□□□□ -2.31
VPS13DQ5THJ4 Y_RNA.433-201ENST00000384089 102 ntBASIC0.62□□□□□ -2.31
VPS13DQ5THJ4 RNA5SP193-201ENST00000410353 107 ntBASIC0.62□□□□□ -2.31
VPS13DQ5THJ4 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC0.62□□□□□ -2.31
VPS13DQ5THJ4 Z80107.1-201ENST00000436830 412 ntBASIC0.62□□□□□ -2.31
VPS13DQ5THJ4 AL022238.1-201ENST00000442557 355 ntBASIC0.62□□□□□ -2.31
VPS13DQ5THJ4 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC0.62□□□□□ -2.31
VPS13DQ5THJ4 DUXAP8-207ENST00000456786 622 ntBASIC0.62□□□□□ -2.31
VPS13DQ5THJ4 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC0.62□□□□□ -2.31
VPS13DQ5THJ4 LRRC34P2-201ENST00000514850 553 ntBASIC0.62□□□□□ -2.31
VPS13DQ5THJ4 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
VPS13DQ5THJ4 SNORA38-201ENST00000363946 132 ntBASIC0.61□□□□□ -2.31
VPS13DQ5THJ4 RNA5SP465-201ENST00000391195 109 ntBASIC0.61□□□□□ -2.31
VPS13DQ5THJ4 AL358176.2-201ENST00000425769 204 ntBASIC0.61□□□□□ -2.31
VPS13DQ5THJ4 RPL31P35-201ENST00000431058 377 ntBASIC0.61□□□□□ -2.31
VPS13DQ5THJ4 AC087884.1-201ENST00000469738 328 ntBASIC0.61□□□□□ -2.31
VPS13DQ5THJ4 AC110792.2-201ENST00000510278 224 ntBASIC0.61□□□□□ -2.31
VPS13DQ5THJ4 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC0.61□□□□□ -2.31
VPS13DQ5THJ4 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC0.61□□□□□ -2.31
VPS13DQ5THJ4 MIR4714-201ENST00000580728 77 ntBASIC0.61□□□□□ -2.31
VPS13DQ5THJ4 AC010889.1-201ENST00000566193 2666 ntBASIC0.61□□□□□ -2.31
VPS13DQ5THJ4 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC0.61□□□□□ -2.31
VPS13DQ5THJ4 AL356379.1-201ENST00000414105 126 ntBASIC0.61□□□□□ -2.31
VPS13DQ5THJ4 AC244453.4-201ENST00000419150 388 ntBASIC0.61□□□□□ -2.31
VPS13DQ5THJ4 AC246680.2-201ENST00000422106 389 ntBASIC0.61□□□□□ -2.31
VPS13DQ5THJ4 AC244035.1-201ENST00000430042 390 ntBASIC0.61□□□□□ -2.31
VPS13DQ5THJ4 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC0.61□□□□□ -2.31
VPS13DQ5THJ4 RPL21P103-201ENST00000479921 488 ntBASIC0.61□□□□□ -2.31
VPS13DQ5THJ4 RNU6-928P-201ENST00000516876 104 ntBASIC0.61□□□□□ -2.31
VPS13DQ5THJ4 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC0.61□□□□□ -2.31
VPS13DQ5THJ4 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC0.61□□□□□ -2.31
VPS13DQ5THJ4 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC0.61□□□□□ -2.31
VPS13DQ5THJ4 MIR4698-201ENST00000577795 80 ntBASIC0.61□□□□□ -2.31
VPS13DQ5THJ4 CCT4P2-201ENST00000233836 1548 ntBASIC0.61□□□□□ -2.31
VPS13DQ5THJ4 ZNF37BP-203ENST00000452306 1352 ntBASIC0.61□□□□□ -2.31
VPS13DQ5THJ4 U8.3-201ENST00000363321 132 ntBASIC0.61□□□□□ -2.31
VPS13DQ5THJ4 RNU6-670P-201ENST00000364312 104 ntBASIC0.61□□□□□ -2.31
VPS13DQ5THJ4 AC234064.1-201ENST00000436312 247 ntBASIC0.61□□□□□ -2.31
VPS13DQ5THJ4 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC0.61□□□□□ -2.31
VPS13DQ5THJ4 AC009220.3-201ENST00000604318 586 ntBASIC0.61□□□□□ -2.31
VPS13DQ5THJ4 AC068620.4-201ENST00000636730 1182 ntBASIC0.61□□□□□ -2.31
VPS13DQ5THJ4 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC0.61□□□□□ -2.31
VPS13DQ5THJ4 AC103833.1-201ENST00000517442 172 ntBASIC0.61□□□□□ -2.31
VPS13DQ5THJ4 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC0.6□□□□□ -2.31
VPS13DQ5THJ4 AC211469.2-201ENST00000605461 205 ntBASIC0.6□□□□□ -2.31
VPS13DQ5THJ4 MIR6835-201ENST00000621552 64 ntBASIC0.6□□□□□ -2.31
VPS13DQ5THJ4 ICE2P2-201ENST00000483823 2787 ntBASIC0.6□□□□□ -2.31
VPS13DQ5THJ4 AC073464.3-201ENST00000422564 712 ntBASIC0.6□□□□□ -2.31
VPS13DQ5THJ4 AL512661.1-201ENST00000434586 1253 ntBASIC0.6□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 92.2 ms