Protein–RNA interactions for Protein: Q496Y0

LONRF3, LON peptidase N-terminal domain and RING finger protein 3, humanhuman

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3Q496Y0 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
LONRF3Q496Y0 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
LONRF3Q496Y0 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
LONRF3Q496Y0 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
LONRF3Q496Y0 RNU5A-8P-201ENST00000364102 114 ntBASIC4.2□□□□□ -1.74
LONRF3Q496Y0 RNY1P12-201ENST00000364251 105 ntBASIC4.2□□□□□ -1.74
LONRF3Q496Y0 SNORA70.4-201ENST00000365509 134 ntBASIC4.2□□□□□ -1.74
LONRF3Q496Y0 RNU6-456P-201ENST00000384493 107 ntBASIC4.2□□□□□ -1.74
LONRF3Q496Y0 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
LONRF3Q496Y0 RNA5SP424-201ENST00000390988 115 ntBASIC4.2□□□□□ -1.74
LONRF3Q496Y0 SNORA48.8-201ENST00000391324 134 ntBASIC4.2□□□□□ -1.74
LONRF3Q496Y0 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
LONRF3Q496Y0 AL353193.1-201ENST00000421444 268 ntBASIC4.2□□□□□ -1.74
LONRF3Q496Y0 MTCO1P20-201ENST00000425366 358 ntBASIC4.2□□□□□ -1.74
LONRF3Q496Y0 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC4.2□□□□□ -1.74
LONRF3Q496Y0 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC4.2□□□□□ -1.74
LONRF3Q496Y0 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC4.2□□□□□ -1.74
LONRF3Q496Y0 RPL23AP20-201ENST00000447965 421 ntBASIC4.2□□□□□ -1.74
LONRF3Q496Y0 AC006480.1-201ENST00000449887 378 ntBASIC4.2□□□□□ -1.74
LONRF3Q496Y0 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC4.2□□□□□ -1.74
LONRF3Q496Y0 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC4.2□□□□□ -1.74
LONRF3Q496Y0 AC008481.1-201ENST00000463278 396 ntBASIC4.2□□□□□ -1.74
LONRF3Q496Y0 AC079382.1-201ENST00000493346 557 ntBASIC4.2□□□□□ -1.74
LONRF3Q496Y0 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC4.2□□□□□ -1.74
LONRF3Q496Y0 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC4.2□□□□□ -1.74
LONRF3Q496Y0 AC010265.1-201ENST00000513509 211 ntBASIC4.2□□□□□ -1.74
LONRF3Q496Y0 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC4.2□□□□□ -1.74
LONRF3Q496Y0 AC109635.3-201ENST00000529536 185 ntBASIC4.2□□□□□ -1.74
LONRF3Q496Y0 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC4.2□□□□□ -1.74
LONRF3Q496Y0 AL133153.1-201ENST00000557756 303 ntBASIC4.2□□□□□ -1.74
LONRF3Q496Y0 AC025678.1-201ENST00000567861 338 ntBASIC4.2□□□□□ -1.74
LONRF3Q496Y0 AC006116.10-201ENST00000591836 581 ntBASIC4.2□□□□□ -1.74
LONRF3Q496Y0 AP001596.2-201ENST00000608410 312 ntBASIC4.2□□□□□ -1.74
LONRF3Q496Y0 AC069200.1-201ENST00000609511 323 ntBASIC4.2□□□□□ -1.74
LONRF3Q496Y0 AC010133.1-201ENST00000615809 842 ntBASIC4.2□□□□□ -1.74
LONRF3Q496Y0 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC4.2□□□□□ -1.74
LONRF3Q496Y0 AL008636.1-201ENST00000625038 1018 ntBASIC4.2□□□□□ -1.74
LONRF3Q496Y0 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC4.2□□□□□ -1.74
LONRF3Q496Y0 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC4.2□□□□□ -1.74
LONRF3Q496Y0 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC4.2□□□□□ -1.74
LONRF3Q496Y0 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
LONRF3Q496Y0 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
LONRF3Q496Y0 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
LONRF3Q496Y0 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
LONRF3Q496Y0 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
LONRF3Q496Y0 RNU6-283P-201ENST00000364788 107 ntBASIC4.19□□□□□ -1.74
LONRF3Q496Y0 Y_RNA.303-201ENST00000364998 94 ntBASIC4.19□□□□□ -1.74
LONRF3Q496Y0 RNY3P13-201ENST00000365542 102 ntBASIC4.19□□□□□ -1.74
LONRF3Q496Y0 RNU6-483P-201ENST00000384088 108 ntBASIC4.19□□□□□ -1.74
LONRF3Q496Y0 SNORA5A-201ENST00000384111 134 ntBASIC4.19□□□□□ -1.74
LONRF3Q496Y0 SAR1AP2-201ENST00000392696 594 ntBASIC4.19□□□□□ -1.74
LONRF3Q496Y0 RPL21P24-201ENST00000413752 448 ntBASIC4.19□□□□□ -1.74
LONRF3Q496Y0 USP9YP27-201ENST00000418455 438 ntBASIC4.19□□□□□ -1.74
LONRF3Q496Y0 AC245054.1-201ENST00000420944 258 ntBASIC4.19□□□□□ -1.74
LONRF3Q496Y0 HSPE1P1-201ENST00000421494 318 ntBASIC4.19□□□□□ -1.74
LONRF3Q496Y0 TRIM60P10Y-201ENST00000425589 751 ntBASIC4.19□□□□□ -1.74
LONRF3Q496Y0 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC4.19□□□□□ -1.74
LONRF3Q496Y0 TRIM60P8Y-201ENST00000436338 762 ntBASIC4.19□□□□□ -1.74
LONRF3Q496Y0 HMGB1P31-201ENST00000437242 427 ntBASIC4.19□□□□□ -1.74
LONRF3Q496Y0 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC4.19□□□□□ -1.74
LONRF3Q496Y0 snoU13.22-201ENST00000459428 104 ntBASIC4.19□□□□□ -1.74
LONRF3Q496Y0 FCF1P3-201ENST00000496394 590 ntBASIC4.19□□□□□ -1.74
LONRF3Q496Y0 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
LONRF3Q496Y0 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC4.19□□□□□ -1.74
LONRF3Q496Y0 MAL2-206ENST00000522187 547 ntTSL 4 BASIC4.19□□□□□ -1.74
LONRF3Q496Y0 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC4.19□□□□□ -1.74
LONRF3Q496Y0 AC118273.2-201ENST00000532092 465 ntBASIC4.19□□□□□ -1.74
LONRF3Q496Y0 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC4.19□□□□□ -1.74
LONRF3Q496Y0 AC008011.1-201ENST00000545989 227 ntBASIC4.19□□□□□ -1.74
LONRF3Q496Y0 AL512310.1-201ENST00000548639 172 ntBASIC4.19□□□□□ -1.74
LONRF3Q496Y0 AC005951.2-201ENST00000576282 495 ntBASIC4.19□□□□□ -1.74
LONRF3Q496Y0 AC245517.5-201ENST00000611529 162 ntBASIC4.19□□□□□ -1.74
LONRF3Q496Y0 SDR42E1P2-201ENST00000614861 481 ntBASIC4.19□□□□□ -1.74
LONRF3Q496Y0 AL138880.2-201ENST00000616214 239 ntBASIC4.19□□□□□ -1.74
LONRF3Q496Y0 AC002553.4-201ENST00000616896 331 ntBASIC4.19□□□□□ -1.74
LONRF3Q496Y0 AC006338.1-201ENST00000618453 749 ntBASIC4.19□□□□□ -1.74
LONRF3Q496Y0 SRP54-214ENST00000630962 162 ntTSL 5 BASIC4.19□□□□□ -1.74
LONRF3Q496Y0 MIR1321-201ENST00000637766 79 ntBASIC4.19□□□□□ -1.74
LONRF3Q496Y0 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC4.19□□□□□ -1.74
LONRF3Q496Y0 AC099654.14-201ENST00000638599 341 ntBASIC4.19□□□□□ -1.74
LONRF3Q496Y0 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
LONRF3Q496Y0 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
LONRF3Q496Y0 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
LONRF3Q496Y0 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.18□□□□□ -1.74
LONRF3Q496Y0 SDAD1P2-201ENST00000441308 2028 ntBASIC4.18□□□□□ -1.74
LONRF3Q496Y0 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
LONRF3Q496Y0 CRP-203ENST00000368111 512 ntTSL 3 BASIC4.18□□□□□ -1.74
LONRF3Q496Y0 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
LONRF3Q496Y0 Y_RNA.573-201ENST00000384763 105 ntBASIC4.18□□□□□ -1.74
LONRF3Q496Y0 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
LONRF3Q496Y0 RPL21P17-201ENST00000397467 475 ntBASIC4.18□□□□□ -1.74
LONRF3Q496Y0 EI24P2-201ENST00000397776 1076 ntBASIC4.18□□□□□ -1.74
LONRF3Q496Y0 MTATP6P18-201ENST00000417994 673 ntBASIC4.18□□□□□ -1.74
LONRF3Q496Y0 AL035423.1-201ENST00000420331 213 ntBASIC4.18□□□□□ -1.74
LONRF3Q496Y0 AL591419.1-201ENST00000427423 339 ntBASIC4.18□□□□□ -1.74
LONRF3Q496Y0 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC4.18□□□□□ -1.74
LONRF3Q496Y0 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC4.18□□□□□ -1.74
LONRF3Q496Y0 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC4.18□□□□□ -1.74
LONRF3Q496Y0 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
LONRF3Q496Y0 RPL7P49-201ENST00000471402 708 ntBASIC4.18□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 266.3 ms