Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 AL513185.3-201ENST00000433335 1300 ntBASIC2.92□□□□□ -1.94
PEX3P56589 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
PEX3P56589 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
PEX3P56589 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.91□□□□□ -1.94
PEX3P56589 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.91□□□□□ -1.94
PEX3P56589 Y_RNA.46-201ENST00000362695 102 ntBASIC2.91□□□□□ -1.94
PEX3P56589 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
PEX3P56589 DEFB109C-201ENST00000382575 264 ntBASIC2.91□□□□□ -1.94
PEX3P56589 DEFB109B-201ENST00000382656 264 ntBASIC2.91□□□□□ -1.94
PEX3P56589 RNU6-76P-201ENST00000384060 104 ntBASIC2.91□□□□□ -1.94
PEX3P56589 MIR19A-201ENST00000384878 82 ntBASIC2.91□□□□□ -1.94
PEX3P56589 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
PEX3P56589 SNORD115.1-201ENST00000391109 76 ntBASIC2.91□□□□□ -1.94
PEX3P56589 RNU6-754P-201ENST00000391166 107 ntBASIC2.91□□□□□ -1.94
PEX3P56589 RNU1-101P-201ENST00000391171 127 ntBASIC2.91□□□□□ -1.94
PEX3P56589 SNORD88.1-201ENST00000408684 91 ntBASIC2.91□□□□□ -1.94
PEX3P56589 RNA5SP129-201ENST00000410276 118 ntBASIC2.91□□□□□ -1.94
PEX3P56589 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.91□□□□□ -1.94
PEX3P56589 CYCSP46-201ENST00000423569 204 ntBASIC2.91□□□□□ -1.94
PEX3P56589 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC2.91□□□□□ -1.94
PEX3P56589 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC2.91□□□□□ -1.94
PEX3P56589 AC244035.1-201ENST00000430042 390 ntBASIC2.91□□□□□ -1.94
PEX3P56589 RABEPKP1-201ENST00000440529 1026 ntBASIC2.91□□□□□ -1.94
PEX3P56589 BMI1P1-201ENST00000445879 941 ntBASIC2.91□□□□□ -1.94
PEX3P56589 MTATP6P26-201ENST00000445926 662 ntBASIC2.91□□□□□ -1.94
PEX3P56589 MRPL50P4-201ENST00000446432 475 ntBASIC2.91□□□□□ -1.94
PEX3P56589 MTCO1P42-201ENST00000457379 726 ntBASIC2.91□□□□□ -1.94
PEX3P56589 AC006445.2-201ENST00000510061 472 ntBASIC2.91□□□□□ -1.94
PEX3P56589 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC2.91□□□□□ -1.94
PEX3P56589 AC096725.1-201ENST00000514266 313 ntBASIC2.91□□□□□ -1.94
PEX3P56589 MTCO2P32-201ENST00000514865 403 ntBASIC2.91□□□□□ -1.94
PEX3P56589 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC2.91□□□□□ -1.94
PEX3P56589 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC2.91□□□□□ -1.94
PEX3P56589 AC060788.1-201ENST00000521318 469 ntBASIC2.91□□□□□ -1.94
PEX3P56589 AL356057.1-201ENST00000533798 831 ntBASIC2.91□□□□□ -1.94
PEX3P56589 AC125611.2-201ENST00000551907 647 ntBASIC2.91□□□□□ -1.94
PEX3P56589 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
PEX3P56589 MEG8-218ENST00000556720 456 ntTSL 3 BASIC2.91□□□□□ -1.94
PEX3P56589 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC2.91□□□□□ -1.94
PEX3P56589 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC2.91□□□□□ -1.94
PEX3P56589 MIR5697-201ENST00000578045 78 ntBASIC2.91□□□□□ -1.94
PEX3P56589 AC012065.4-201ENST00000602445 679 ntBASIC2.91□□□□□ -1.94
PEX3P56589 AL031775.1-201ENST00000607014 887 ntBASIC2.91□□□□□ -1.94
PEX3P56589 AC004696.1-201ENST00000614345 607 ntBASIC2.91□□□□□ -1.94
PEX3P56589 AC092140.2-201ENST00000618027 521 ntBASIC2.91□□□□□ -1.94
PEX3P56589 AC009268.2-201ENST00000621925 457 ntBASIC2.91□□□□□ -1.94
PEX3P56589 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC2.91□□□□□ -1.94
PEX3P56589 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
PEX3P56589 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.91□□□□□ -1.94
PEX3P56589 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.91□□□□□ -1.94
PEX3P56589 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
PEX3P56589 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.91□□□□□ -1.94
PEX3P56589 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
PEX3P56589 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC2.9□□□□□ -1.94
PEX3P56589 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC2.9□□□□□ -1.94
PEX3P56589 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC2.9□□□□□ -1.94
PEX3P56589 RNU6-637P-201ENST00000384050 107 ntBASIC2.9□□□□□ -1.95
PEX3P56589 SNORA36C-201ENST00000384289 132 ntBASIC2.9□□□□□ -1.95
PEX3P56589 MIR196B-201ENST00000384852 84 ntBASIC2.9□□□□□ -1.95
PEX3P56589 MT-TH-201ENST00000387441 69 ntBASIC2.9□□□□□ -1.95
PEX3P56589 SNORA26.8-201ENST00000391306 124 ntBASIC2.9□□□□□ -1.95
PEX3P56589 RPS20P2-201ENST00000402520 389 ntBASIC2.9□□□□□ -1.95
PEX3P56589 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
PEX3P56589 UBE2D3P2-201ENST00000424409 445 ntBASIC2.9□□□□□ -1.95
PEX3P56589 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC2.9□□□□□ -1.95
PEX3P56589 MED14P1-201ENST00000430517 648 ntBASIC2.9□□□□□ -1.95
PEX3P56589 UBE2V1P13-201ENST00000436983 439 ntBASIC2.9□□□□□ -1.95
PEX3P56589 AC118469.1-201ENST00000442943 488 ntBASIC2.9□□□□□ -1.95
PEX3P56589 MTND2P4-201ENST00000445034 1004 ntBASIC2.9□□□□□ -1.95
PEX3P56589 RPL39P40-201ENST00000445481 146 ntBASIC2.9□□□□□ -1.95
PEX3P56589 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC2.9□□□□□ -1.95
PEX3P56589 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC2.9□□□□□ -1.95
PEX3P56589 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC2.9□□□□□ -1.95
PEX3P56589 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC2.9□□□□□ -1.95
PEX3P56589 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC2.9□□□□□ -1.95
PEX3P56589 SNORA70.16-201ENST00000516390 95 ntBASIC2.9□□□□□ -1.95
PEX3P56589 RNU6-201P-201ENST00000517100 61 ntBASIC2.9□□□□□ -1.95
PEX3P56589 AC090136.1-201ENST00000520009 240 ntBASIC2.9□□□□□ -1.95
PEX3P56589 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC2.9□□□□□ -1.95
PEX3P56589 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC2.9□□□□□ -1.95
PEX3P56589 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.9□□□□□ -1.95
PEX3P56589 AL355836.1-201ENST00000555951 870 ntBASIC2.9□□□□□ -1.95
PEX3P56589 AC012414.6-201ENST00000568241 401 ntBASIC2.9□□□□□ -1.95
PEX3P56589 AP005136.1-201ENST00000579765 429 ntBASIC2.9□□□□□ -1.95
PEX3P56589 AC105224.1-201ENST00000587055 421 ntBASIC2.9□□□□□ -1.95
PEX3P56589 AC108747.1-201ENST00000609508 535 ntBASIC2.9□□□□□ -1.95
PEX3P56589 AL603758.1-201ENST00000618654 241 ntBASIC2.9□□□□□ -1.95
PEX3P56589 FAM35BP-202ENST00000497389 3337 ntBASIC2.9□□□□□ -1.95
PEX3P56589 AC092125.1-201ENST00000562568 1995 ntBASIC2.9□□□□□ -1.95
PEX3P56589 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
PEX3P56589 MTCO1P9-201ENST00000505577 1534 ntBASIC2.89□□□□□ -1.95
PEX3P56589 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.89□□□□□ -1.95
PEX3P56589 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
PEX3P56589 Y_RNA.111-201ENST00000363248 100 ntBASIC2.89□□□□□ -1.95
PEX3P56589 RNU6-173P-201ENST00000364215 104 ntBASIC2.89□□□□□ -1.95
PEX3P56589 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.89□□□□□ -1.95
PEX3P56589 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC2.89□□□□□ -1.95
PEX3P56589 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC2.89□□□□□ -1.95
PEX3P56589 AC233728.2-201ENST00000425348 757 ntBASIC2.89□□□□□ -1.95
PEX3P56589 SAR1AP4-201ENST00000429225 591 ntBASIC2.89□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 137.8 ms