Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC2.22□□□□□ -2.05
CXCL12P48061 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC2.22□□□□□ -2.05
CXCL12P48061 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC2.22□□□□□ -2.05
CXCL12P48061 RNA5SP200-201ENST00000516360 103 ntBASIC2.22□□□□□ -2.05
CXCL12P48061 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC2.22□□□□□ -2.05
CXCL12P48061 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.22□□□□□ -2.05
CXCL12P48061 OR6C7P-201ENST00000547875 934 ntBASIC2.22□□□□□ -2.05
CXCL12P48061 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC2.22□□□□□ -2.05
CXCL12P48061 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC2.22□□□□□ -2.05
CXCL12P48061 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC2.22□□□□□ -2.05
CXCL12P48061 AL049838.1-201ENST00000563647 981 ntBASIC2.22□□□□□ -2.05
CXCL12P48061 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC2.22□□□□□ -2.05
CXCL12P48061 AC011494.1-201ENST00000596454 237 ntBASIC2.22□□□□□ -2.05
CXCL12P48061 BBIP1P1-201ENST00000602999 279 ntBASIC2.22□□□□□ -2.05
CXCL12P48061 AC011458.1-201ENST00000604034 617 ntBASIC2.22□□□□□ -2.05
CXCL12P48061 AP000787.2-201ENST00000604432 568 ntBASIC2.22□□□□□ -2.05
CXCL12P48061 AL133507.1-201ENST00000605269 557 ntBASIC2.22□□□□□ -2.05
CXCL12P48061 AC080013.3-201ENST00000606839 578 ntBASIC2.22□□□□□ -2.05
CXCL12P48061 AC024933.1-201ENST00000608472 348 ntBASIC2.22□□□□□ -2.05
CXCL12P48061 AC103710.2-201ENST00000609912 942 ntBASIC2.22□□□□□ -2.05
CXCL12P48061 DUXAP10-204ENST00000612052 616 ntBASIC2.22□□□□□ -2.05
CXCL12P48061 AC140725.3-201ENST00000616193 880 ntBASIC2.22□□□□□ -2.05
CXCL12P48061 AL357080.1-201ENST00000617394 239 ntBASIC2.22□□□□□ -2.05
CXCL12P48061 OR4G3P-201ENST00000633500 913 ntBASIC2.22□□□□□ -2.05
CXCL12P48061 AC099786.3-201ENST00000565735 1410 ntBASIC2.22□□□□□ -2.05
CXCL12P48061 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
CXCL12P48061 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC2.22□□□□□ -2.05
CXCL12P48061 AC005539.1-201ENST00000443768 1479 ntBASIC2.21□□□□□ -2.06
CXCL12P48061 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
CXCL12P48061 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
CXCL12P48061 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
CXCL12P48061 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
CXCL12P48061 RNA5SP139-201ENST00000364340 117 ntBASIC2.21□□□□□ -2.06
CXCL12P48061 RNU6-1180P-201ENST00000364935 107 ntBASIC2.21□□□□□ -2.06
CXCL12P48061 CASP3-203ENST00000393588 677 ntTSL 4 BASIC2.21□□□□□ -2.06
CXCL12P48061 RNU2-25P-201ENST00000411041 191 ntBASIC2.21□□□□□ -2.06
CXCL12P48061 AL096701.2-201ENST00000416920 238 ntBASIC2.21□□□□□ -2.06
CXCL12P48061 AL953862.1-201ENST00000423016 168 ntBASIC2.21□□□□□ -2.06
CXCL12P48061 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC2.21□□□□□ -2.06
CXCL12P48061 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.21□□□□□ -2.06
CXCL12P48061 COX7BP2-201ENST00000437976 242 ntBASIC2.21□□□□□ -2.06
CXCL12P48061 RPL7P54-201ENST00000438336 674 ntBASIC2.21□□□□□ -2.06
CXCL12P48061 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC2.21□□□□□ -2.06
CXCL12P48061 RPL26P6-201ENST00000440913 438 ntBASIC2.21□□□□□ -2.06
CXCL12P48061 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC2.21□□□□□ -2.06
CXCL12P48061 EEF1E1P1-201ENST00000446998 430 ntBASIC2.21□□□□□ -2.06
CXCL12P48061 MTND1P31-201ENST00000449206 961 ntBASIC2.21□□□□□ -2.06
CXCL12P48061 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC2.21□□□□□ -2.06
CXCL12P48061 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC2.21□□□□□ -2.06
CXCL12P48061 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC2.21□□□□□ -2.06
CXCL12P48061 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC2.21□□□□□ -2.06
CXCL12P48061 RPL31P60-201ENST00000478450 367 ntBASIC2.21□□□□□ -2.06
CXCL12P48061 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC2.21□□□□□ -2.06
CXCL12P48061 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC2.21□□□□□ -2.06
CXCL12P48061 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC2.21□□□□□ -2.06
CXCL12P48061 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC2.21□□□□□ -2.06
CXCL12P48061 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC2.21□□□□□ -2.06
CXCL12P48061 MTND5P4-201ENST00000514978 288 ntBASIC2.21□□□□□ -2.06
CXCL12P48061 RNU6-826P-201ENST00000516827 104 ntBASIC2.21□□□□□ -2.06
CXCL12P48061 RNU6-528P-201ENST00000516926 100 ntBASIC2.21□□□□□ -2.06
CXCL12P48061 RNU6-714P-201ENST00000516963 103 ntBASIC2.21□□□□□ -2.06
CXCL12P48061 SCARNA1-201ENST00000517138 166 ntBASIC2.21□□□□□ -2.06
CXCL12P48061 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.21□□□□□ -2.06
CXCL12P48061 AC025881.1-201ENST00000518851 512 ntBASIC2.21□□□□□ -2.06
CXCL12P48061 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC2.21□□□□□ -2.06
CXCL12P48061 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC2.21□□□□□ -2.06
CXCL12P48061 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC2.21□□□□□ -2.06
CXCL12P48061 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC2.21□□□□□ -2.06
CXCL12P48061 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC2.21□□□□□ -2.06
CXCL12P48061 NBEAP1-201ENST00000554452 979 ntBASIC2.21□□□□□ -2.06
CXCL12P48061 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC2.21□□□□□ -2.06
CXCL12P48061 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC2.21□□□□□ -2.06
CXCL12P48061 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC2.21□□□□□ -2.06
CXCL12P48061 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.21□□□□□ -2.06
CXCL12P48061 MTND1P8-201ENST00000571424 950 ntBASIC2.21□□□□□ -2.06
CXCL12P48061 AC020895.1-201ENST00000595362 272 ntBASIC2.21□□□□□ -2.06
CXCL12P48061 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.21□□□□□ -2.06
CXCL12P48061 AP000942.3-201ENST00000603702 160 ntBASIC2.21□□□□□ -2.06
CXCL12P48061 AC106791.2-201ENST00000604680 391 ntBASIC2.21□□□□□ -2.06
CXCL12P48061 AL391813.2-201ENST00000609113 322 ntBASIC2.21□□□□□ -2.06
CXCL12P48061 AC245297.2-201ENST00000610119 565 ntBASIC2.21□□□□□ -2.06
CXCL12P48061 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.21□□□□□ -2.06
CXCL12P48061 AC245517.5-201ENST00000611529 162 ntBASIC2.21□□□□□ -2.06
CXCL12P48061 AC016597.2-201ENST00000613256 341 ntBASIC2.21□□□□□ -2.06
CXCL12P48061 SNHG22-203ENST00000617833 660 ntBASIC2.21□□□□□ -2.06
CXCL12P48061 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.21□□□□□ -2.06
CXCL12P48061 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC2.21□□□□□ -2.06
CXCL12P48061 FO624990.1-201ENST00000636373 85 ntBASIC2.21□□□□□ -2.06
CXCL12P48061 AC099654.7-201ENST00000635788 2127 ntBASIC2.21□□□□□ -2.06
CXCL12P48061 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.2□□□□□ -2.06
CXCL12P48061 CUL1P1-201ENST00000509510 2425 ntBASIC2.2□□□□□ -2.06
CXCL12P48061 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
CXCL12P48061 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
CXCL12P48061 Y_RNA.4-201ENST00000362333 112 ntBASIC2.2□□□□□ -2.06
CXCL12P48061 RNA5SP38-201ENST00000410750 119 ntBASIC2.2□□□□□ -2.06
CXCL12P48061 USP9YP33-201ENST00000412220 421 ntBASIC2.2□□□□□ -2.06
CXCL12P48061 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC2.2□□□□□ -2.06
CXCL12P48061 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC2.2□□□□□ -2.06
CXCL12P48061 SUMO1P4-201ENST00000429430 302 ntBASIC2.2□□□□□ -2.06
CXCL12P48061 OR4K11P-201ENST00000431829 904 ntBASIC2.2□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms