Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 AC127391.1-201ENST00000411737 98 ntBASIC2.94□□□□□ -1.94
SNX3O60493 AC063979.1-201ENST00000415539 377 ntBASIC2.94□□□□□ -1.94
SNX3O60493 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC2.94□□□□□ -1.94
SNX3O60493 ELOCP4-201ENST00000420090 333 ntBASIC2.94□□□□□ -1.94
SNX3O60493 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC2.94□□□□□ -1.94
SNX3O60493 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC2.94□□□□□ -1.94
SNX3O60493 ISCA1P6-201ENST00000427740 390 ntBASIC2.94□□□□□ -1.94
SNX3O60493 AC093106.2-201ENST00000428212 385 ntBASIC2.94□□□□□ -1.94
SNX3O60493 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC2.94□□□□□ -1.94
SNX3O60493 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC2.94□□□□□ -1.94
SNX3O60493 BNIP3P2-201ENST00000441221 577 ntBASIC2.94□□□□□ -1.94
SNX3O60493 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC2.94□□□□□ -1.94
SNX3O60493 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC2.94□□□□□ -1.94
SNX3O60493 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC2.94□□□□□ -1.94
SNX3O60493 AC244505.5-201ENST00000443639 207 ntBASIC2.94□□□□□ -1.94
SNX3O60493 MTND1P27-201ENST00000451117 902 ntBASIC2.94□□□□□ -1.94
SNX3O60493 SNRPGP6-201ENST00000451124 220 ntBASIC2.94□□□□□ -1.94
SNX3O60493 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC2.94□□□□□ -1.94
SNX3O60493 RNU6-420P-201ENST00000458780 107 ntBASIC2.94□□□□□ -1.94
SNX3O60493 SNORD97-201ENST00000459187 142 ntBASIC2.94□□□□□ -1.94
SNX3O60493 RPL21P10-201ENST00000463521 490 ntBASIC2.94□□□□□ -1.94
SNX3O60493 AC008155.2-201ENST00000464337 397 ntBASIC2.94□□□□□ -1.94
SNX3O60493 MTCO2P29-201ENST00000465212 189 ntBASIC2.94□□□□□ -1.94
SNX3O60493 AC103975.1-201ENST00000482506 483 ntBASIC2.94□□□□□ -1.94
SNX3O60493 RPL32P34-201ENST00000486380 400 ntBASIC2.94□□□□□ -1.94
SNX3O60493 AC104619.4-201ENST00000510773 249 ntBASIC2.94□□□□□ -1.94
SNX3O60493 RNU6-927P-201ENST00000516199 100 ntBASIC2.94□□□□□ -1.94
SNX3O60493 RNU6-928P-201ENST00000516876 104 ntBASIC2.94□□□□□ -1.94
SNX3O60493 AP006587.4-201ENST00000526053 529 ntBASIC2.94□□□□□ -1.94
SNX3O60493 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC2.94□□□□□ -1.94
SNX3O60493 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC2.94□□□□□ -1.94
SNX3O60493 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC2.94□□□□□ -1.94
SNX3O60493 AL163153.1-201ENST00000554223 283 ntBASIC2.94□□□□□ -1.94
SNX3O60493 MIR3682-201ENST00000581338 84 ntBASIC2.94□□□□□ -1.94
SNX3O60493 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC2.94□□□□□ -1.94
SNX3O60493 BNIP3P33-201ENST00000598912 569 ntBASIC2.94□□□□□ -1.94
SNX3O60493 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC2.94□□□□□ -1.94
SNX3O60493 AL359198.2-201ENST00000611836 194 ntBASIC2.94□□□□□ -1.94
SNX3O60493 DLEU2_1.1-201ENST00000612089 120 ntBASIC2.94□□□□□ -1.94
SNX3O60493 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC2.94□□□□□ -1.94
SNX3O60493 AL133173.2-201ENST00000614270 90 ntBASIC2.94□□□□□ -1.94
SNX3O60493 DLEU2_1.2-201ENST00000614667 120 ntBASIC2.94□□□□□ -1.94
SNX3O60493 AC048344.4-201ENST00000619744 527 ntBASIC2.94□□□□□ -1.94
SNX3O60493 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC2.94□□□□□ -1.94
SNX3O60493 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
SNX3O60493 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC2.93□□□□□ -1.94
SNX3O60493 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC2.93□□□□□ -1.94
SNX3O60493 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.93□□□□□ -1.94
SNX3O60493 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
SNX3O60493 SNORD56.2-201ENST00000363242 71 ntBASIC2.93□□□□□ -1.94
SNX3O60493 RNU6-270P-201ENST00000364131 105 ntBASIC2.93□□□□□ -1.94
SNX3O60493 RNU5E-6P-201ENST00000365574 115 ntBASIC2.93□□□□□ -1.94
SNX3O60493 RNA5SP252-201ENST00000391131 119 ntBASIC2.93□□□□□ -1.94
SNX3O60493 RPS3AP36-201ENST00000398190 775 ntBASIC2.93□□□□□ -1.94
SNX3O60493 RNU2-33P-201ENST00000410344 192 ntBASIC2.93□□□□□ -1.94
SNX3O60493 RN7SKP263-201ENST00000411194 309 ntBASIC2.93□□□□□ -1.94
SNX3O60493 BX323014.1-201ENST00000412876 237 ntBASIC2.93□□□□□ -1.94
SNX3O60493 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC2.93□□□□□ -1.94
SNX3O60493 BTF3L4P3-201ENST00000418879 476 ntBASIC2.93□□□□□ -1.94
SNX3O60493 AC092047.1-201ENST00000424997 240 ntBASIC2.93□□□□□ -1.94
SNX3O60493 RPL7P2-201ENST00000427639 268 ntBASIC2.93□□□□□ -1.94
SNX3O60493 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.93□□□□□ -1.94
SNX3O60493 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC2.93□□□□□ -1.94
SNX3O60493 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC2.93□□□□□ -1.94
SNX3O60493 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC2.93□□□□□ -1.94
SNX3O60493 Z82210.1-201ENST00000440037 231 ntBASIC2.93□□□□□ -1.94
SNX3O60493 KATNBL1P3-201ENST00000443475 909 ntBASIC2.93□□□□□ -1.94
SNX3O60493 MTND1P29-201ENST00000448112 647 ntBASIC2.93□□□□□ -1.94
SNX3O60493 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC2.93□□□□□ -1.94
SNX3O60493 MTND4LP3-201ENST00000468320 276 ntBASIC2.93□□□□□ -1.94
SNX3O60493 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC2.93□□□□□ -1.94
SNX3O60493 RPS29P2-201ENST00000479278 136 ntBASIC2.93□□□□□ -1.94
SNX3O60493 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC2.93□□□□□ -1.94
SNX3O60493 MTND4P2-201ENST00000507767 1203 ntBASIC2.93□□□□□ -1.94
SNX3O60493 SNORA31.1-201ENST00000515993 133 ntBASIC2.93□□□□□ -1.94
SNX3O60493 SNORA31.5-201ENST00000516190 133 ntBASIC2.93□□□□□ -1.94
SNX3O60493 RNU2-10P-201ENST00000516375 211 ntBASIC2.93□□□□□ -1.94
SNX3O60493 RNU6-1282P-201ENST00000516735 96 ntBASIC2.93□□□□□ -1.94
SNX3O60493 RNU6-1220P-201ENST00000517126 108 ntBASIC2.93□□□□□ -1.94
SNX3O60493 RNU6-711P-201ENST00000517255 106 ntBASIC2.93□□□□□ -1.94
SNX3O60493 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC2.93□□□□□ -1.94
SNX3O60493 AC022616.3-201ENST00000523940 148 ntBASIC2.93□□□□□ -1.94
SNX3O60493 AC011979.2-201ENST00000527568 352 ntBASIC2.93□□□□□ -1.94
SNX3O60493 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC2.93□□□□□ -1.94
SNX3O60493 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC2.93□□□□□ -1.94
SNX3O60493 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC2.93□□□□□ -1.94
SNX3O60493 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC2.93□□□□□ -1.94
SNX3O60493 MIR3913-1-201ENST00000577744 102 ntBASIC2.93□□□□□ -1.94
SNX3O60493 MIR3160-1-201ENST00000577972 85 ntBASIC2.93□□□□□ -1.94
SNX3O60493 MIR3609-201ENST00000582661 80 ntBASIC2.93□□□□□ -1.94
SNX3O60493 AC079089.3-201ENST00000603094 673 ntBASIC2.93□□□□□ -1.94
SNX3O60493 AC064872.1-201ENST00000604823 1072 ntBASIC2.93□□□□□ -1.94
SNX3O60493 AC007619.2-201ENST00000605743 379 ntBASIC2.93□□□□□ -1.94
SNX3O60493 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC2.93□□□□□ -1.94
SNX3O60493 AC009509.4-201ENST00000619202 509 ntBASIC2.93□□□□□ -1.94
SNX3O60493 AC068724.3-201ENST00000625906 87 ntBASIC2.93□□□□□ -1.94
SNX3O60493 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC2.93□□□□□ -1.94
SNX3O60493 AC009093.8-201ENST00000641769 292 ntBASIC2.93□□□□□ -1.94
SNX3O60493 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
SNX3O60493 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 115.9 ms