Protein–RNA interactions for Protein: O00555

CACNA1A, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, humanhuman

Predictions only

Length 2,505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1AO00555 AL133393.1-201ENST00000603277 287 ntBASIC1.04□□□□□ -2.24
CACNA1AO00555 Y_RNA.447-201ENST00000384184 113 ntBASIC1.04□□□□□ -2.24
CACNA1AO00555 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC1.04□□□□□ -2.24
CACNA1AO00555 RNU2-70P-201ENST00000410718 179 ntBASIC1.04□□□□□ -2.24
CACNA1AO00555 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC1.04□□□□□ -2.24
CACNA1AO00555 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC1.04□□□□□ -2.24
CACNA1AO00555 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC1.04□□□□□ -2.24
CACNA1AO00555 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC1.04□□□□□ -2.24
CACNA1AO00555 XIST_intron.1-201ENST00000619444 68 ntBASIC1.04□□□□□ -2.24
CACNA1AO00555 C2orf27A-204ENST00000623058 969 ntBASIC1.04□□□□□ -2.24
CACNA1AO00555 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
CACNA1AO00555 SNORA4.3-201ENST00000365564 137 ntBASIC1.03□□□□□ -2.24
CACNA1AO00555 MOB4-205ENST00000409916 829 ntTSL 3 BASIC1.03□□□□□ -2.24
CACNA1AO00555 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC1.03□□□□□ -2.24
CACNA1AO00555 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC1.03□□□□□ -2.24
CACNA1AO00555 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC1.03□□□□□ -2.24
CACNA1AO00555 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC1.03□□□□□ -2.24
CACNA1AO00555 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
CACNA1AO00555 AC012321.1-201ENST00000561622 1588 ntBASIC1.03□□□□□ -2.25
CACNA1AO00555 OR5AQ1P-202ENST00000641257 1534 ntBASIC1.03□□□□□ -2.25
CACNA1AO00555 OR5AQ1P-203ENST00000641818 1529 ntBASIC1.03□□□□□ -2.25
CACNA1AO00555 RNU6-733P-201ENST00000410759 104 ntBASIC1.03□□□□□ -2.25
CACNA1AO00555 HMGN2P35-201ENST00000412164 270 ntBASIC1.03□□□□□ -2.25
CACNA1AO00555 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC1.03□□□□□ -2.25
CACNA1AO00555 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC1.03□□□□□ -2.25
CACNA1AO00555 AC113155.1-201ENST00000511141 769 ntBASIC1.03□□□□□ -2.25
CACNA1AO00555 AC090821.2-201ENST00000523552 176 ntBASIC1.03□□□□□ -2.25
CACNA1AO00555 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.03□□□□□ -2.25
CACNA1AO00555 RPL23AP88-201ENST00000605759 454 ntBASIC1.03□□□□□ -2.25
CACNA1AO00555 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC1.02□□□□□ -2.25
CACNA1AO00555 AC090515.1-201ENST00000465295 476 ntBASIC1.02□□□□□ -2.25
CACNA1AO00555 SNRPGP3-201ENST00000469405 227 ntBASIC1.02□□□□□ -2.25
CACNA1AO00555 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC1.02□□□□□ -2.25
CACNA1AO00555 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC1.02□□□□□ -2.25
CACNA1AO00555 Y_RNA.468-201ENST00000384298 102 ntBASIC1.01□□□□□ -2.25
CACNA1AO00555 MIR604-201ENST00000384880 94 ntBASIC1.01□□□□□ -2.25
CACNA1AO00555 MIR591-201ENST00000385290 95 ntBASIC1.01□□□□□ -2.25
CACNA1AO00555 AL139397.2-201ENST00000404529 772 ntBASIC1.01□□□□□ -2.25
CACNA1AO00555 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
CACNA1AO00555 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC1.01□□□□□ -2.25
CACNA1AO00555 AC092754.2-201ENST00000463506 460 ntBASIC1.01□□□□□ -2.25
CACNA1AO00555 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC1.01□□□□□ -2.25
CACNA1AO00555 AC091057.2-201ENST00000602594 792 ntBASIC1.01□□□□□ -2.25
CACNA1AO00555 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.01□□□□□ -2.25
CACNA1AO00555 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
CACNA1AO00555 RNU4-73P-201ENST00000363164 141 ntBASIC1.01□□□□□ -2.25
CACNA1AO00555 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC1.01□□□□□ -2.25
CACNA1AO00555 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC1.01□□□□□ -2.25
CACNA1AO00555 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC1.01□□□□□ -2.25
CACNA1AO00555 AC104115.2-201ENST00000523026 687 ntBASIC1.01□□□□□ -2.25
CACNA1AO00555 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC1.01□□□□□ -2.25
CACNA1AO00555 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.01□□□□□ -2.25
CACNA1AO00555 IL33-202ENST00000417746 2327 ntTSL 2 BASIC1.01□□□□□ -2.25
CACNA1AO00555 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
CACNA1AO00555 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
CACNA1AO00555 Y_RNA.185-201ENST00000363894 100 ntBASIC1□□□□□ -2.25
CACNA1AO00555 MIR601-201ENST00000385256 79 ntBASIC1□□□□□ -2.25
CACNA1AO00555 RNA5SP511-201ENST00000410487 115 ntBASIC1□□□□□ -2.25
CACNA1AO00555 PTGES3P5-201ENST00000455109 434 ntBASIC1□□□□□ -2.25
CACNA1AO00555 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC1□□□□□ -2.25
CACNA1AO00555 MIR5694-201ENST00000581190 76 ntBASIC1□□□□□ -2.25
CACNA1AO00555 AC093788.1-201ENST00000609356 927 ntBASIC1□□□□□ -2.25
CACNA1AO00555 AC106028.5-201ENST00000610332 395 ntBASIC1□□□□□ -2.25
CACNA1AO00555 AC021755.4-201ENST00000616620 456 ntBASIC1□□□□□ -2.25
CACNA1AO00555 MIR198-201ENST00000637333 62 ntBASIC1□□□□□ -2.25
CACNA1AO00555 AP002907.1-201ENST00000606361 1430 ntBASIC1□□□□□ -2.25
CACNA1AO00555 AL118496.1-201ENST00000440201 1812 ntBASIC1□□□□□ -2.25
CACNA1AO00555 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC1□□□□□ -2.25
CACNA1AO00555 RNU6-203P-201ENST00000384038 104 ntBASIC1□□□□□ -2.25
CACNA1AO00555 MTND2P16-201ENST00000419987 799 ntBASIC1□□□□□ -2.25
CACNA1AO00555 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC1□□□□□ -2.25
CACNA1AO00555 ARPC3P2-201ENST00000457786 533 ntBASIC1□□□□□ -2.25
CACNA1AO00555 RPS26P21-201ENST00000475397 348 ntBASIC1□□□□□ -2.25
CACNA1AO00555 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC1□□□□□ -2.25
CACNA1AO00555 AC005786.1-201ENST00000588553 154 ntBASIC1□□□□□ -2.25
CACNA1AO00555 CNOT6LP1-201ENST00000559681 1462 ntBASIC1□□□□□ -2.25
CACNA1AO00555 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC0.99□□□□□ -2.25
CACNA1AO00555 OR4G2P-201ENST00000328113 903 ntBASIC0.99□□□□□ -2.25
CACNA1AO00555 RNY4P6-201ENST00000363667 96 ntBASIC0.99□□□□□ -2.25
CACNA1AO00555 SNORA8.3-201ENST00000384679 139 ntBASIC0.99□□□□□ -2.25
CACNA1AO00555 TXNP7-201ENST00000406296 293 ntBASIC0.99□□□□□ -2.25
CACNA1AO00555 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC0.99□□□□□ -2.25
CACNA1AO00555 OR51B8P-201ENST00000449892 769 ntBASIC0.99□□□□□ -2.25
CACNA1AO00555 AC090617.7-201ENST00000623952 126 ntBASIC0.99□□□□□ -2.25
CACNA1AO00555 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC0.99□□□□□ -2.25
CACNA1AO00555 RNU4-38P-201ENST00000364472 129 ntBASIC0.99□□□□□ -2.25
CACNA1AO00555 HMGB1P13-201ENST00000406019 642 ntBASIC0.99□□□□□ -2.25
CACNA1AO00555 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC0.99□□□□□ -2.25
CACNA1AO00555 SSXP9-201ENST00000417503 292 ntBASIC0.99□□□□□ -2.25
CACNA1AO00555 RPS15AP7-201ENST00000439294 405 ntBASIC0.99□□□□□ -2.25
CACNA1AO00555 NAP1L1P3-201ENST00000462291 880 ntBASIC0.99□□□□□ -2.25
CACNA1AO00555 RPL21P104-201ENST00000464143 478 ntBASIC0.99□□□□□ -2.25
CACNA1AO00555 RPL30P12-201ENST00000474666 353 ntBASIC0.99□□□□□ -2.25
CACNA1AO00555 AC093852.1-201ENST00000503587 266 ntBASIC0.99□□□□□ -2.25
CACNA1AO00555 Y_RNA.659-201ENST00000515994 113 ntBASIC0.99□□□□□ -2.25
CACNA1AO00555 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC0.99□□□□□ -2.25
CACNA1AO00555 IGLVVI-22-1-201ENST00000521183 211 ntBASIC0.99□□□□□ -2.25
CACNA1AO00555 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC0.99□□□□□ -2.25
CACNA1AO00555 RNY1P9-201ENST00000532431 109 ntBASIC0.99□□□□□ -2.25
CACNA1AO00555 AP001180.3-201ENST00000582221 145 ntBASIC0.99□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms