Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC4.33□□□□□ -1.72
COL4A3BPQ9Y5P4 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
COL4A3BPQ9Y5P4 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
COL4A3BPQ9Y5P4 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.33□□□□□ -1.72
COL4A3BPQ9Y5P4 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.33□□□□□ -1.72
COL4A3BPQ9Y5P4 RNU6-1287P-201ENST00000362914 107 ntBASIC4.33□□□□□ -1.72
COL4A3BPQ9Y5P4 RNU6-217P-201ENST00000384164 104 ntBASIC4.33□□□□□ -1.72
COL4A3BPQ9Y5P4 RNU6-1060P-201ENST00000384664 107 ntBASIC4.33□□□□□ -1.72
COL4A3BPQ9Y5P4 Y_RNA.576-201ENST00000384781 102 ntBASIC4.33□□□□□ -1.72
COL4A3BPQ9Y5P4 MIR30B-201ENST00000384850 88 ntBASIC4.33□□□□□ -1.72
COL4A3BPQ9Y5P4 RNU6ATAC25P-201ENST00000408798 117 ntBASIC4.33□□□□□ -1.72
COL4A3BPQ9Y5P4 RNU6-1077P-201ENST00000410506 102 ntBASIC4.33□□□□□ -1.72
COL4A3BPQ9Y5P4 AC092809.3-201ENST00000415453 231 ntBASIC4.33□□□□□ -1.72
COL4A3BPQ9Y5P4 AL592045.1-201ENST00000429867 352 ntBASIC4.33□□□□□ -1.72
COL4A3BPQ9Y5P4 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC4.33□□□□□ -1.72
COL4A3BPQ9Y5P4 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.33□□□□□ -1.72
COL4A3BPQ9Y5P4 RPL7P54-201ENST00000438336 674 ntBASIC4.33□□□□□ -1.72
COL4A3BPQ9Y5P4 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC4.33□□□□□ -1.72
COL4A3BPQ9Y5P4 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.33□□□□□ -1.72
COL4A3BPQ9Y5P4 FABP5P15-201ENST00000453566 214 ntBASIC4.33□□□□□ -1.72
COL4A3BPQ9Y5P4 NDUFAF4P4-201ENST00000454883 502 ntBASIC4.33□□□□□ -1.72
COL4A3BPQ9Y5P4 RNU6-261P-201ENST00000459506 102 ntBASIC4.33□□□□□ -1.72
COL4A3BPQ9Y5P4 AC083798.1-201ENST00000472671 131 ntBASIC4.33□□□□□ -1.72
COL4A3BPQ9Y5P4 AC012181.1-201ENST00000479895 423 ntBASIC4.33□□□□□ -1.72
COL4A3BPQ9Y5P4 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC4.33□□□□□ -1.72
COL4A3BPQ9Y5P4 ARL4AP2-201ENST00000507378 601 ntBASIC4.33□□□□□ -1.72
COL4A3BPQ9Y5P4 AC010342.1-201ENST00000514047 877 ntBASIC4.33□□□□□ -1.72
COL4A3BPQ9Y5P4 RNU6-914P-201ENST00000516749 109 ntBASIC4.33□□□□□ -1.72
COL4A3BPQ9Y5P4 RNU6-685P-201ENST00000517088 95 ntBASIC4.33□□□□□ -1.72
COL4A3BPQ9Y5P4 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC4.33□□□□□ -1.72
COL4A3BPQ9Y5P4 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
COL4A3BPQ9Y5P4 CYCSP30-201ENST00000546447 172 ntBASIC4.33□□□□□ -1.72
COL4A3BPQ9Y5P4 AC005951.1-201ENST00000576706 485 ntBASIC4.33□□□□□ -1.72
COL4A3BPQ9Y5P4 AC006504.3-201ENST00000586818 523 ntBASIC4.33□□□□□ -1.72
COL4A3BPQ9Y5P4 AC126118.1-201ENST00000607744 628 ntBASIC4.33□□□□□ -1.72
COL4A3BPQ9Y5P4 U6atac.1-201ENST00000616025 117 ntBASIC4.33□□□□□ -1.72
COL4A3BPQ9Y5P4 AL512643.1-201ENST00000635735 524 ntBASIC4.33□□□□□ -1.72
COL4A3BPQ9Y5P4 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
COL4A3BPQ9Y5P4 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
COL4A3BPQ9Y5P4 MAPK10-373ENST00000641983 6772 ntBASIC4.33□□□□□ -1.72
COL4A3BPQ9Y5P4 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.33□□□□□ -1.72
COL4A3BPQ9Y5P4 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.33□□□□□ -1.72
COL4A3BPQ9Y5P4 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC4.33□□□□□ -1.72
COL4A3BPQ9Y5P4 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
COL4A3BPQ9Y5P4 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
COL4A3BPQ9Y5P4 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
COL4A3BPQ9Y5P4 RNU6-1029P-201ENST00000384109 107 ntBASIC4.32□□□□□ -1.72
COL4A3BPQ9Y5P4 RNA5SP38-201ENST00000410750 119 ntBASIC4.32□□□□□ -1.72
COL4A3BPQ9Y5P4 HMGB3P20-201ENST00000417997 600 ntBASIC4.32□□□□□ -1.72
COL4A3BPQ9Y5P4 EIF1P1-201ENST00000421436 341 ntBASIC4.32□□□□□ -1.72
COL4A3BPQ9Y5P4 MTCO3P30-201ENST00000426425 670 ntBASIC4.32□□□□□ -1.72
COL4A3BPQ9Y5P4 AL591704.1-201ENST00000432574 275 ntBASIC4.32□□□□□ -1.72
COL4A3BPQ9Y5P4 AL596276.1-201ENST00000434465 418 ntBASIC4.32□□□□□ -1.72
COL4A3BPQ9Y5P4 SNRPEP9-201ENST00000436794 238 ntBASIC4.32□□□□□ -1.72
COL4A3BPQ9Y5P4 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC4.32□□□□□ -1.72
COL4A3BPQ9Y5P4 SNORA84-201ENST00000459229 133 ntBASIC4.32□□□□□ -1.72
COL4A3BPQ9Y5P4 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC4.32□□□□□ -1.72
COL4A3BPQ9Y5P4 RPL36AP51-201ENST00000487216 318 ntBASIC4.32□□□□□ -1.72
COL4A3BPQ9Y5P4 AC098591.2-201ENST00000510152 315 ntBASIC4.32□□□□□ -1.72
COL4A3BPQ9Y5P4 UTP23-205ENST00000520733 369 ntTSL 3 BASIC4.32□□□□□ -1.72
COL4A3BPQ9Y5P4 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC4.32□□□□□ -1.72
COL4A3BPQ9Y5P4 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
COL4A3BPQ9Y5P4 AL157687.1-201ENST00000554853 619 ntBASIC4.32□□□□□ -1.72
COL4A3BPQ9Y5P4 AC025678.1-201ENST00000567861 338 ntBASIC4.32□□□□□ -1.72
COL4A3BPQ9Y5P4 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
COL4A3BPQ9Y5P4 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC4.32□□□□□ -1.72
COL4A3BPQ9Y5P4 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC4.32□□□□□ -1.72
COL4A3BPQ9Y5P4 AC008521.1-201ENST00000587471 187 ntBASIC4.32□□□□□ -1.72
COL4A3BPQ9Y5P4 HSPE1P7-201ENST00000604681 321 ntBASIC4.32□□□□□ -1.72
COL4A3BPQ9Y5P4 AC008945.2-201ENST00000606056 604 ntBASIC4.32□□□□□ -1.72
COL4A3BPQ9Y5P4 AC092794.1-201ENST00000612734 582 ntBASIC4.32□□□□□ -1.72
COL4A3BPQ9Y5P4 AC026585.1-201ENST00000619582 524 ntBASIC4.32□□□□□ -1.72
COL4A3BPQ9Y5P4 AC011155.2-201ENST00000623202 216 ntBASIC4.32□□□□□ -1.72
COL4A3BPQ9Y5P4 AC073308.1-201ENST00000623696 305 ntBASIC4.32□□□□□ -1.72
COL4A3BPQ9Y5P4 ATM-228ENST00000639240 498 ntTSL 5 BASIC4.32□□□□□ -1.72
COL4A3BPQ9Y5P4 ATM-230ENST00000640388 578 ntTSL 5 BASIC4.32□□□□□ -1.72
COL4A3BPQ9Y5P4 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.32□□□□□ -1.72
COL4A3BPQ9Y5P4 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
COL4A3BPQ9Y5P4 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
COL4A3BPQ9Y5P4 MIR199A2-201ENST00000385289 110 ntBASIC4.31□□□□□ -1.72
COL4A3BPQ9Y5P4 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
COL4A3BPQ9Y5P4 PTMAP5-201ENST00000393073 333 ntBASIC4.31□□□□□ -1.72
COL4A3BPQ9Y5P4 AC068050.1-201ENST00000394891 380 ntBASIC4.31□□□□□ -1.72
COL4A3BPQ9Y5P4 CIR1P3-201ENST00000405137 479 ntBASIC4.31□□□□□ -1.72
COL4A3BPQ9Y5P4 RNU2-29P-201ENST00000410423 189 ntBASIC4.31□□□□□ -1.72
COL4A3BPQ9Y5P4 RNU4-46P-201ENST00000410818 138 ntBASIC4.31□□□□□ -1.72
COL4A3BPQ9Y5P4 RNA5SP111-201ENST00000411386 101 ntBASIC4.31□□□□□ -1.72
COL4A3BPQ9Y5P4 USP9YP6-201ENST00000413550 854 ntBASIC4.31□□□□□ -1.72
COL4A3BPQ9Y5P4 AC007390.1-201ENST00000415722 356 ntBASIC4.31□□□□□ -1.72
COL4A3BPQ9Y5P4 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC4.31□□□□□ -1.72
COL4A3BPQ9Y5P4 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC4.31□□□□□ -1.72
COL4A3BPQ9Y5P4 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC4.31□□□□□ -1.72
COL4A3BPQ9Y5P4 AL445584.1-201ENST00000431451 330 ntBASIC4.31□□□□□ -1.72
COL4A3BPQ9Y5P4 RPL36AP53-201ENST00000432891 316 ntBASIC4.31□□□□□ -1.72
COL4A3BPQ9Y5P4 AL606489.2-201ENST00000433886 234 ntBASIC4.31□□□□□ -1.72
COL4A3BPQ9Y5P4 AC007389.2-201ENST00000434630 306 ntBASIC4.31□□□□□ -1.72
COL4A3BPQ9Y5P4 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC4.31□□□□□ -1.72
COL4A3BPQ9Y5P4 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC4.31□□□□□ -1.72
COL4A3BPQ9Y5P4 RPS24P13-201ENST00000442520 397 ntBASIC4.31□□□□□ -1.72
COL4A3BPQ9Y5P4 DCLRE1CP1-201ENST00000454630 470 ntBASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 91.1 ms