Protein–RNA interactions for Protein: Q9UJQ4

SALL4, Sal-like protein 4, humanhuman

Predictions only

Length 1,053 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL4Q9UJQ4 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC5.03□□□□□ -1.6
SALL4Q9UJQ4 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC5.03□□□□□ -1.6
SALL4Q9UJQ4 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SALL4Q9UJQ4 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SALL4Q9UJQ4 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
SALL4Q9UJQ4 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SALL4Q9UJQ4 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SALL4Q9UJQ4 AC107068.1-201ENST00000563286 4218 ntBASIC5.03□□□□□ -1.6
SALL4Q9UJQ4 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
SALL4Q9UJQ4 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
SALL4Q9UJQ4 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.02□□□□□ -1.61
SALL4Q9UJQ4 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SALL4Q9UJQ4 AC099654.2-201ENST00000433031 1980 ntBASIC5.02□□□□□ -1.61
SALL4Q9UJQ4 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC5.02□□□□□ -1.61
SALL4Q9UJQ4 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SALL4Q9UJQ4 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SALL4Q9UJQ4 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC5.02□□□□□ -1.61
SALL4Q9UJQ4 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SALL4Q9UJQ4 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SALL4Q9UJQ4 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SALL4Q9UJQ4 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
SALL4Q9UJQ4 RNU4-50P-201ENST00000364361 141 ntBASIC5.02□□□□□ -1.61
SALL4Q9UJQ4 Y_RNA.324-201ENST00000365165 102 ntBASIC5.02□□□□□ -1.61
SALL4Q9UJQ4 Y_RNA.376-201ENST00000365638 108 ntBASIC5.02□□□□□ -1.61
SALL4Q9UJQ4 MT-TW-201ENST00000387382 68 ntBASIC5.02□□□□□ -1.61
SALL4Q9UJQ4 RNU6-882P-201ENST00000391025 103 ntBASIC5.02□□□□□ -1.61
SALL4Q9UJQ4 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC5.02□□□□□ -1.61
SALL4Q9UJQ4 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC5.02□□□□□ -1.61
SALL4Q9UJQ4 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC5.02□□□□□ -1.61
SALL4Q9UJQ4 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC5.02□□□□□ -1.61
SALL4Q9UJQ4 AC008716.1-201ENST00000511084 513 ntBASIC5.02□□□□□ -1.61
SALL4Q9UJQ4 RNA5SP446-201ENST00000515955 82 ntBASIC5.02□□□□□ -1.61
SALL4Q9UJQ4 RNU6-1023P-201ENST00000516137 106 ntBASIC5.02□□□□□ -1.61
SALL4Q9UJQ4 Y_RNA.687-201ENST00000516558 91 ntBASIC5.02□□□□□ -1.61
SALL4Q9UJQ4 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC5.02□□□□□ -1.61
SALL4Q9UJQ4 AC087385.3-201ENST00000620477 187 ntBASIC5.02□□□□□ -1.61
SALL4Q9UJQ4 FP236240.3-201ENST00000623061 327 ntBASIC5.02□□□□□ -1.61
SALL4Q9UJQ4 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SALL4Q9UJQ4 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC5.02□□□□□ -1.61
SALL4Q9UJQ4 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC5.02□□□□□ -1.61
SALL4Q9UJQ4 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SALL4Q9UJQ4 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.02□□□□□ -1.61
SALL4Q9UJQ4 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
SALL4Q9UJQ4 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
SALL4Q9UJQ4 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
SALL4Q9UJQ4 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SALL4Q9UJQ4 AC090971.4-201ENST00000560291 1800 ntBASIC5.02□□□□□ -1.61
SALL4Q9UJQ4 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
SALL4Q9UJQ4 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
SALL4Q9UJQ4 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SALL4Q9UJQ4 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
SALL4Q9UJQ4 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
SALL4Q9UJQ4 Y_RNA.14-201ENST00000362415 103 ntBASIC5.01□□□□□ -1.61
SALL4Q9UJQ4 RNU6-770P-201ENST00000363929 105 ntBASIC5.01□□□□□ -1.61
SALL4Q9UJQ4 RNY3P11-201ENST00000364153 102 ntBASIC5.01□□□□□ -1.61
SALL4Q9UJQ4 SNORA56-201ENST00000383966 129 ntBASIC5.01□□□□□ -1.61
SALL4Q9UJQ4 Y_RNA.483-201ENST00000384380 101 ntBASIC5.01□□□□□ -1.61
SALL4Q9UJQ4 RNU6-325P-201ENST00000411132 105 ntBASIC5.01□□□□□ -1.61
SALL4Q9UJQ4 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC5.01□□□□□ -1.61
SALL4Q9UJQ4 ELOCP20-201ENST00000422460 345 ntBASIC5.01□□□□□ -1.61
SALL4Q9UJQ4 AL138785.1-201ENST00000425821 331 ntBASIC5.01□□□□□ -1.61
SALL4Q9UJQ4 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC5.01□□□□□ -1.61
SALL4Q9UJQ4 RPS3AP46-201ENST00000448352 682 ntBASIC5.01□□□□□ -1.61
SALL4Q9UJQ4 RNU7-169P-201ENST00000459456 61 ntBASIC5.01□□□□□ -1.61
SALL4Q9UJQ4 RPL39P38-201ENST00000467018 153 ntBASIC5.01□□□□□ -1.61
SALL4Q9UJQ4 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC5.01□□□□□ -1.61
SALL4Q9UJQ4 FTH1P9-201ENST00000513251 355 ntBASIC5.01□□□□□ -1.61
SALL4Q9UJQ4 RNU6-143P-201ENST00000516942 93 ntBASIC5.01□□□□□ -1.61
SALL4Q9UJQ4 SNORA31.22-201ENST00000517204 135 ntBASIC5.01□□□□□ -1.61
SALL4Q9UJQ4 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC5.01□□□□□ -1.61
SALL4Q9UJQ4 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC5.01□□□□□ -1.61
SALL4Q9UJQ4 BNIP3P5-201ENST00000562290 498 ntBASIC5.01□□□□□ -1.61
SALL4Q9UJQ4 AC022726.1-201ENST00000587475 207 ntBASIC5.01□□□□□ -1.61
SALL4Q9UJQ4 RPS29P30-201ENST00000600975 111 ntBASIC5.01□□□□□ -1.61
SALL4Q9UJQ4 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC5.01□□□□□ -1.61
SALL4Q9UJQ4 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
SALL4Q9UJQ4 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.01□□□□□ -1.61
SALL4Q9UJQ4 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
SALL4Q9UJQ4 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
SALL4Q9UJQ4 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC5.01□□□□□ -1.61
SALL4Q9UJQ4 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
SALL4Q9UJQ4 DPY19L2P2-203ENST00000435536 1858 ntBASIC5□□□□□ -1.61
SALL4Q9UJQ4 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
SALL4Q9UJQ4 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC5□□□□□ -1.61
SALL4Q9UJQ4 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5□□□□□ -1.61
SALL4Q9UJQ4 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC5□□□□□ -1.61
SALL4Q9UJQ4 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
SALL4Q9UJQ4 AC093535.2-201ENST00000624769 2326 ntBASIC5□□□□□ -1.61
SALL4Q9UJQ4 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC5□□□□□ -1.61
SALL4Q9UJQ4 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5□□□□□ -1.61
SALL4Q9UJQ4 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
SALL4Q9UJQ4 RNU1-20P-201ENST00000363314 162 ntBASIC5□□□□□ -1.61
SALL4Q9UJQ4 SNORA51.11-201ENST00000384442 131 ntBASIC5□□□□□ -1.61
SALL4Q9UJQ4 Y_RNA.534-201ENST00000384599 112 ntBASIC5□□□□□ -1.61
SALL4Q9UJQ4 RNU6-1179P-201ENST00000384667 107 ntBASIC5□□□□□ -1.61
SALL4Q9UJQ4 MIR921-201ENST00000401133 56 ntBASIC5□□□□□ -1.61
SALL4Q9UJQ4 RNU2-38P-201ENST00000410856 79 ntBASIC5□□□□□ -1.61
SALL4Q9UJQ4 AL353621.1-201ENST00000418219 243 ntBASIC5□□□□□ -1.61
SALL4Q9UJQ4 AC245028.1-201ENST00000423259 256 ntBASIC5□□□□□ -1.61
SALL4Q9UJQ4 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC5□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms