Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC3.41□□□□□ -1.86
SIX4Q9UIU6 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.41□□□□□ -1.86
SIX4Q9UIU6 RNU6-445P-201ENST00000516949 107 ntBASIC3.41□□□□□ -1.86
SIX4Q9UIU6 RNA5SP337-201ENST00000517007 109 ntBASIC3.41□□□□□ -1.86
SIX4Q9UIU6 AC104027.1-201ENST00000521887 300 ntBASIC3.41□□□□□ -1.86
SIX4Q9UIU6 AC134698.4-201ENST00000523451 826 ntBASIC3.41□□□□□ -1.86
SIX4Q9UIU6 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.41□□□□□ -1.86
SIX4Q9UIU6 AL133271.1-201ENST00000538229 291 ntBASIC3.41□□□□□ -1.86
SIX4Q9UIU6 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC3.41□□□□□ -1.86
SIX4Q9UIU6 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.41□□□□□ -1.86
SIX4Q9UIU6 AL133241.1-201ENST00000556832 487 ntBASIC3.41□□□□□ -1.86
SIX4Q9UIU6 AC092325.1-201ENST00000566449 554 ntBASIC3.41□□□□□ -1.86
SIX4Q9UIU6 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.41□□□□□ -1.86
SIX4Q9UIU6 OR4K8P-201ENST00000578842 1048 ntBASIC3.41□□□□□ -1.86
SIX4Q9UIU6 MIR3167-201ENST00000579623 85 ntBASIC3.41□□□□□ -1.86
SIX4Q9UIU6 MIR3200-201ENST00000580767 85 ntBASIC3.41□□□□□ -1.86
SIX4Q9UIU6 AP001429.1-201ENST00000602568 530 ntBASIC3.41□□□□□ -1.86
SIX4Q9UIU6 AL391646.1-201ENST00000603860 190 ntBASIC3.41□□□□□ -1.86
SIX4Q9UIU6 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.41□□□□□ -1.86
SIX4Q9UIU6 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC3.41□□□□□ -1.86
SIX4Q9UIU6 U7.8-201ENST00000619968 63 ntBASIC3.41□□□□□ -1.86
SIX4Q9UIU6 AC091903.1-201ENST00000624322 454 ntBASIC3.41□□□□□ -1.86
SIX4Q9UIU6 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.41□□□□□ -1.86
SIX4Q9UIU6 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.41□□□□□ -1.86
SIX4Q9UIU6 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
SIX4Q9UIU6 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
SIX4Q9UIU6 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.41□□□□□ -1.86
SIX4Q9UIU6 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.4□□□□□ -1.86
SIX4Q9UIU6 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
SIX4Q9UIU6 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.4□□□□□ -1.86
SIX4Q9UIU6 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
SIX4Q9UIU6 AL138713.1-201ENST00000624026 2130 ntBASIC3.4□□□□□ -1.86
SIX4Q9UIU6 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.4□□□□□ -1.86
SIX4Q9UIU6 AL353746.1-201ENST00000566293 6881 ntBASIC3.4□□□□□ -1.86
SIX4Q9UIU6 RNU1-75P-201ENST00000347264 129 ntBASIC3.4□□□□□ -1.87
SIX4Q9UIU6 Y_RNA.1-201ENST00000352915 104 ntBASIC3.4□□□□□ -1.87
SIX4Q9UIU6 RNU5A-8P-201ENST00000364102 114 ntBASIC3.4□□□□□ -1.87
SIX4Q9UIU6 SNORA7.2-201ENST00000364446 145 ntBASIC3.4□□□□□ -1.87
SIX4Q9UIU6 RNU6-1078P-201ENST00000364522 103 ntBASIC3.4□□□□□ -1.87
SIX4Q9UIU6 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
SIX4Q9UIU6 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.87
SIX4Q9UIU6 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.4□□□□□ -1.87
SIX4Q9UIU6 SNORA20.2-201ENST00000383922 131 ntBASIC3.4□□□□□ -1.87
SIX4Q9UIU6 RNU6-1103P-201ENST00000384150 107 ntBASIC3.4□□□□□ -1.87
SIX4Q9UIU6 MIR607-201ENST00000385241 96 ntBASIC3.4□□□□□ -1.87
SIX4Q9UIU6 AL583834.1-201ENST00000406943 343 ntBASIC3.4□□□□□ -1.87
SIX4Q9UIU6 SNORA11.1-201ENST00000408133 129 ntBASIC3.4□□□□□ -1.87
SIX4Q9UIU6 RNU6-712P-201ENST00000410558 100 ntBASIC3.4□□□□□ -1.87
SIX4Q9UIU6 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.4□□□□□ -1.87
SIX4Q9UIU6 AL353678.1-201ENST00000422735 741 ntBASIC3.4□□□□□ -1.87
SIX4Q9UIU6 USP9YP18-201ENST00000425912 695 ntBASIC3.4□□□□□ -1.87
SIX4Q9UIU6 RPL23AP69-201ENST00000431134 458 ntBASIC3.4□□□□□ -1.87
SIX4Q9UIU6 FCF1P1-201ENST00000432690 571 ntBASIC3.4□□□□□ -1.87
SIX4Q9UIU6 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
SIX4Q9UIU6 RBMX2P4-201ENST00000441256 376 ntBASIC3.4□□□□□ -1.87
SIX4Q9UIU6 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.4□□□□□ -1.87
SIX4Q9UIU6 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC3.4□□□□□ -1.87
SIX4Q9UIU6 MTND1P12-201ENST00000455231 147 ntBASIC3.4□□□□□ -1.87
SIX4Q9UIU6 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.4□□□□□ -1.87
SIX4Q9UIU6 AC006445.1-201ENST00000491925 405 ntBASIC3.4□□□□□ -1.87
SIX4Q9UIU6 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC3.4□□□□□ -1.87
SIX4Q9UIU6 AC022616.3-201ENST00000523940 148 ntBASIC3.4□□□□□ -1.87
SIX4Q9UIU6 AP001893.2-201ENST00000526949 202 ntBASIC3.4□□□□□ -1.87
SIX4Q9UIU6 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
SIX4Q9UIU6 AC126177.3-201ENST00000551839 688 ntBASIC3.4□□□□□ -1.87
SIX4Q9UIU6 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC3.4□□□□□ -1.87
SIX4Q9UIU6 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.4□□□□□ -1.87
SIX4Q9UIU6 UBL5P2-201ENST00000583788 219 ntBASIC3.4□□□□□ -1.87
SIX4Q9UIU6 AL031176.1-201ENST00000604554 466 ntBASIC3.4□□□□□ -1.87
SIX4Q9UIU6 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC3.4□□□□□ -1.87
SIX4Q9UIU6 AC007038.2-201ENST00000608095 740 ntBASIC3.4□□□□□ -1.87
SIX4Q9UIU6 XIST_intron.1-201ENST00000619444 68 ntBASIC3.4□□□□□ -1.87
SIX4Q9UIU6 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.4□□□□□ -1.87
SIX4Q9UIU6 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.4□□□□□ -1.87
SIX4Q9UIU6 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.87
SIX4Q9UIU6 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.4□□□□□ -1.87
SIX4Q9UIU6 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
SIX4Q9UIU6 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
SIX4Q9UIU6 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
SIX4Q9UIU6 RNA5SP295-201ENST00000362655 121 ntBASIC3.39□□□□□ -1.87
SIX4Q9UIU6 Y_RNA.256-201ENST00000364594 104 ntBASIC3.39□□□□□ -1.87
SIX4Q9UIU6 Y_RNA.409-201ENST00000383990 98 ntBASIC3.39□□□□□ -1.87
SIX4Q9UIU6 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
SIX4Q9UIU6 ELOCP4-201ENST00000420090 333 ntBASIC3.39□□□□□ -1.87
SIX4Q9UIU6 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC3.39□□□□□ -1.87
SIX4Q9UIU6 TRIM60P10Y-201ENST00000425589 751 ntBASIC3.39□□□□□ -1.87
SIX4Q9UIU6 MTCO2P19-201ENST00000427513 598 ntBASIC3.39□□□□□ -1.87
SIX4Q9UIU6 RPL21P112-201ENST00000434403 463 ntBASIC3.39□□□□□ -1.87
SIX4Q9UIU6 AC002486.1-201ENST00000435098 391 ntBASIC3.39□□□□□ -1.87
SIX4Q9UIU6 TRIM60P8Y-201ENST00000436338 762 ntBASIC3.39□□□□□ -1.87
SIX4Q9UIU6 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC3.39□□□□□ -1.87
SIX4Q9UIU6 AC132479.1-201ENST00000449160 144 ntBASIC3.39□□□□□ -1.87
SIX4Q9UIU6 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.39□□□□□ -1.87
SIX4Q9UIU6 FGF7P6-202ENST00000451282 293 ntBASIC3.39□□□□□ -1.87
SIX4Q9UIU6 MTCO3P38-201ENST00000468910 766 ntBASIC3.39□□□□□ -1.87
SIX4Q9UIU6 RN7SL330P-201ENST00000469709 307 ntBASIC3.39□□□□□ -1.87
SIX4Q9UIU6 AC019235.1-201ENST00000503847 207 ntBASIC3.39□□□□□ -1.87
SIX4Q9UIU6 ARL4AP2-201ENST00000507378 601 ntBASIC3.39□□□□□ -1.87
SIX4Q9UIU6 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC3.39□□□□□ -1.87
SIX4Q9UIU6 AK6P1-201ENST00000540219 478 ntBASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms