Protein–RNA interactions for Protein: Q9NPJ1

MKKS, McKusick-Kaufman/Bardet-Biedl syndromes putative chaperonin, humanhuman

Predicted RBP Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKKSQ9NPJ1 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC3.34□□□□□ -1.87
MKKSQ9NPJ1 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.87
MKKSQ9NPJ1 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.34□□□□□ -1.87
MKKSQ9NPJ1 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
MKKSQ9NPJ1 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
MKKSQ9NPJ1 RNU5E-6P-201ENST00000365574 115 ntBASIC3.34□□□□□ -1.87
MKKSQ9NPJ1 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
MKKSQ9NPJ1 RNU1-39P-201ENST00000383897 165 ntBASIC3.34□□□□□ -1.87
MKKSQ9NPJ1 RPL17P50-201ENST00000396131 546 ntBASIC3.34□□□□□ -1.87
MKKSQ9NPJ1 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
MKKSQ9NPJ1 AC018630.2-202ENST00000422992 927 ntBASIC3.34□□□□□ -1.87
MKKSQ9NPJ1 RAC1P6-201ENST00000423911 575 ntBASIC3.34□□□□□ -1.87
MKKSQ9NPJ1 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.34□□□□□ -1.87
MKKSQ9NPJ1 MED13P1-201ENST00000428342 171 ntBASIC3.34□□□□□ -1.87
MKKSQ9NPJ1 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC3.34□□□□□ -1.87
MKKSQ9NPJ1 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC3.34□□□□□ -1.87
MKKSQ9NPJ1 CYCSP35-201ENST00000451978 304 ntBASIC3.34□□□□□ -1.87
MKKSQ9NPJ1 RBMY2UP-201ENST00000453474 324 ntBASIC3.34□□□□□ -1.87
MKKSQ9NPJ1 AC022364.2-201ENST00000457963 554 ntBASIC3.34□□□□□ -1.87
MKKSQ9NPJ1 AC126182.1-201ENST00000478134 357 ntBASIC3.34□□□□□ -1.87
MKKSQ9NPJ1 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.34□□□□□ -1.87
MKKSQ9NPJ1 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
MKKSQ9NPJ1 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.34□□□□□ -1.87
MKKSQ9NPJ1 AL359273.1-201ENST00000510918 627 ntBASIC3.34□□□□□ -1.87
MKKSQ9NPJ1 AC105914.1-201ENST00000511798 226 ntBASIC3.34□□□□□ -1.87
MKKSQ9NPJ1 SNORA70.18-201ENST00000516696 98 ntBASIC3.34□□□□□ -1.87
MKKSQ9NPJ1 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC3.34□□□□□ -1.87
MKKSQ9NPJ1 AP001893.2-201ENST00000526949 202 ntBASIC3.34□□□□□ -1.87
MKKSQ9NPJ1 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC3.34□□□□□ -1.87
MKKSQ9NPJ1 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.34□□□□□ -1.87
MKKSQ9NPJ1 TPRKBP2-201ENST00000565969 475 ntBASIC3.34□□□□□ -1.87
MKKSQ9NPJ1 AC012507.3-201ENST00000603556 477 ntBASIC3.34□□□□□ -1.87
MKKSQ9NPJ1 AC024220.1-201ENST00000603675 484 ntBASIC3.34□□□□□ -1.87
MKKSQ9NPJ1 AL670379.6-201ENST00000603753 252 ntBASIC3.34□□□□□ -1.87
MKKSQ9NPJ1 AL670379.11-201ENST00000604059 253 ntBASIC3.34□□□□□ -1.87
MKKSQ9NPJ1 AC008162.1-201ENST00000604718 254 ntBASIC3.34□□□□□ -1.87
MKKSQ9NPJ1 AL670379.1-201ENST00000604752 252 ntBASIC3.34□□□□□ -1.87
MKKSQ9NPJ1 AL670379.5-201ENST00000605253 252 ntBASIC3.34□□□□□ -1.87
MKKSQ9NPJ1 AL670379.12-201ENST00000605291 253 ntBASIC3.34□□□□□ -1.87
MKKSQ9NPJ1 AL670379.8-201ENST00000605353 252 ntBASIC3.34□□□□□ -1.87
MKKSQ9NPJ1 AL670379.7-201ENST00000605823 252 ntBASIC3.34□□□□□ -1.87
MKKSQ9NPJ1 AP002360.4-201ENST00000606980 481 ntBASIC3.34□□□□□ -1.87
MKKSQ9NPJ1 AC126118.1-201ENST00000607744 628 ntBASIC3.34□□□□□ -1.87
MKKSQ9NPJ1 AL359880.1-201ENST00000621879 266 ntBASIC3.34□□□□□ -1.87
MKKSQ9NPJ1 AC092628.2-201ENST00000622492 339 ntBASIC3.34□□□□□ -1.87
MKKSQ9NPJ1 MFSD8-233ENST00000641482 4860 ntBASIC3.34□□□□□ -1.87
MKKSQ9NPJ1 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
MKKSQ9NPJ1 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
MKKSQ9NPJ1 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
MKKSQ9NPJ1 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
MKKSQ9NPJ1 MTCO1P12-201ENST00000414273 1543 ntBASIC3.34□□□□□ -1.88
MKKSQ9NPJ1 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC3.34□□□□□ -1.88
MKKSQ9NPJ1 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.33□□□□□ -1.88
MKKSQ9NPJ1 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
MKKSQ9NPJ1 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
MKKSQ9NPJ1 AC073343.1-201ENST00000328239 651 ntBASIC3.33□□□□□ -1.88
MKKSQ9NPJ1 RNA5SP50-201ENST00000363731 107 ntBASIC3.33□□□□□ -1.88
MKKSQ9NPJ1 RNU6-283P-201ENST00000364788 107 ntBASIC3.33□□□□□ -1.88
MKKSQ9NPJ1 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
MKKSQ9NPJ1 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
MKKSQ9NPJ1 MIR558-201ENST00000384920 94 ntBASIC3.33□□□□□ -1.88
MKKSQ9NPJ1 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC3.33□□□□□ -1.88
MKKSQ9NPJ1 BX842559.1-201ENST00000419615 532 ntBASIC3.33□□□□□ -1.88
MKKSQ9NPJ1 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC3.33□□□□□ -1.88
MKKSQ9NPJ1 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.33□□□□□ -1.88
MKKSQ9NPJ1 RPL23AP30-201ENST00000432419 501 ntBASIC3.33□□□□□ -1.88
MKKSQ9NPJ1 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC3.33□□□□□ -1.88
MKKSQ9NPJ1 HMGN2P20-201ENST00000437531 273 ntBASIC3.33□□□□□ -1.88
MKKSQ9NPJ1 GAPDHP27-201ENST00000447427 1020 ntBASIC3.33□□□□□ -1.88
MKKSQ9NPJ1 MTND2P24-201ENST00000453434 806 ntBASIC3.33□□□□□ -1.88
MKKSQ9NPJ1 RN7SL432P-201ENST00000484057 298 ntBASIC3.33□□□□□ -1.88
MKKSQ9NPJ1 RNU2-27P-201ENST00000516185 142 ntBASIC3.33□□□□□ -1.88
MKKSQ9NPJ1 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC3.33□□□□□ -1.88
MKKSQ9NPJ1 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.33□□□□□ -1.88
MKKSQ9NPJ1 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC3.33□□□□□ -1.88
MKKSQ9NPJ1 AL355836.1-201ENST00000555951 870 ntBASIC3.33□□□□□ -1.88
MKKSQ9NPJ1 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.33□□□□□ -1.88
MKKSQ9NPJ1 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC3.33□□□□□ -1.88
MKKSQ9NPJ1 BDH2P1-201ENST00000602288 736 ntBASIC3.33□□□□□ -1.88
MKKSQ9NPJ1 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC3.33□□□□□ -1.88
MKKSQ9NPJ1 AL391646.1-201ENST00000603860 190 ntBASIC3.33□□□□□ -1.88
MKKSQ9NPJ1 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.33□□□□□ -1.88
MKKSQ9NPJ1 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.33□□□□□ -1.88
MKKSQ9NPJ1 AC118273.1-201ENST00000525324 3006 ntBASIC3.33□□□□□ -1.88
MKKSQ9NPJ1 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
MKKSQ9NPJ1 AF117829.1-206ENST00000621883 3802 ntBASIC3.33□□□□□ -1.88
MKKSQ9NPJ1 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
MKKSQ9NPJ1 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
MKKSQ9NPJ1 AC007656.2-201ENST00000624902 4547 ntBASIC3.32□□□□□ -1.88
MKKSQ9NPJ1 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
MKKSQ9NPJ1 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
MKKSQ9NPJ1 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.32□□□□□ -1.88
MKKSQ9NPJ1 OR4G2P-201ENST00000328113 903 ntBASIC3.32□□□□□ -1.88
MKKSQ9NPJ1 SNORA63.1-201ENST00000362493 131 ntBASIC3.32□□□□□ -1.88
MKKSQ9NPJ1 RNU6-1120P-201ENST00000362988 108 ntBASIC3.32□□□□□ -1.88
MKKSQ9NPJ1 RNA5SP72-201ENST00000364442 117 ntBASIC3.32□□□□□ -1.88
MKKSQ9NPJ1 MIR183-201ENST00000384958 110 ntBASIC3.32□□□□□ -1.88
MKKSQ9NPJ1 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
MKKSQ9NPJ1 MIR1290-201ENST00000408735 78 ntBASIC3.32□□□□□ -1.88
MKKSQ9NPJ1 RNU2-39P-201ENST00000410604 198 ntBASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 91.7 ms