Protein–RNA interactions for Protein: Q9GZS1

POLR1E, DNA-directed RNA polymerase I subunit RPA49, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1EQ9GZS1 SNORA68.1-201ENST00000364537 132 ntBASIC2.67□□□□□ -1.98
POLR1EQ9GZS1 RNU1-100P-201ENST00000365255 165 ntBASIC2.67□□□□□ -1.98
POLR1EQ9GZS1 ELOCP9-201ENST00000418624 239 ntBASIC2.67□□□□□ -1.98
POLR1EQ9GZS1 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.67□□□□□ -1.98
POLR1EQ9GZS1 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC2.67□□□□□ -1.98
POLR1EQ9GZS1 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC2.67□□□□□ -1.98
POLR1EQ9GZS1 AC063976.3-201ENST00000426849 329 ntBASIC2.67□□□□□ -1.98
POLR1EQ9GZS1 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC2.67□□□□□ -1.98
POLR1EQ9GZS1 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC2.67□□□□□ -1.98
POLR1EQ9GZS1 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC2.67□□□□□ -1.98
POLR1EQ9GZS1 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC2.67□□□□□ -1.98
POLR1EQ9GZS1 RPL12P25-201ENST00000455592 494 ntBASIC2.67□□□□□ -1.98
POLR1EQ9GZS1 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.67□□□□□ -1.98
POLR1EQ9GZS1 RPL36AP51-201ENST00000487216 318 ntBASIC2.67□□□□□ -1.98
POLR1EQ9GZS1 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC2.67□□□□□ -1.98
POLR1EQ9GZS1 AC104090.1-201ENST00000506341 1171 ntBASIC2.67□□□□□ -1.98
POLR1EQ9GZS1 AC010587.2-201ENST00000511727 448 ntBASIC2.67□□□□□ -1.98
POLR1EQ9GZS1 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC2.67□□□□□ -1.98
POLR1EQ9GZS1 AC096725.1-201ENST00000514266 313 ntBASIC2.67□□□□□ -1.98
POLR1EQ9GZS1 RNA5SP356-201ENST00000515972 94 ntBASIC2.67□□□□□ -1.98
POLR1EQ9GZS1 RNU6-390P-201ENST00000516259 103 ntBASIC2.67□□□□□ -1.98
POLR1EQ9GZS1 SCARNA1-201ENST00000517138 166 ntBASIC2.67□□□□□ -1.98
POLR1EQ9GZS1 AC100870.1-201ENST00000522035 505 ntBASIC2.67□□□□□ -1.98
POLR1EQ9GZS1 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC2.67□□□□□ -1.98
POLR1EQ9GZS1 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC2.67□□□□□ -1.98
POLR1EQ9GZS1 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC2.67□□□□□ -1.98
POLR1EQ9GZS1 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC2.67□□□□□ -1.98
POLR1EQ9GZS1 AC022662.1-201ENST00000580252 331 ntBASIC2.67□□□□□ -1.98
POLR1EQ9GZS1 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC2.67□□□□□ -1.98
POLR1EQ9GZS1 MIR3117-201ENST00000584034 78 ntBASIC2.67□□□□□ -1.98
POLR1EQ9GZS1 AC245884.10-201ENST00000597355 337 ntBASIC2.67□□□□□ -1.98
POLR1EQ9GZS1 OR2AS2P-201ENST00000606902 342 ntBASIC2.67□□□□□ -1.98
POLR1EQ9GZS1 AC016597.2-201ENST00000613256 341 ntBASIC2.67□□□□□ -1.98
POLR1EQ9GZS1 AL078595.3-201ENST00000623815 1166 ntBASIC2.67□□□□□ -1.98
POLR1EQ9GZS1 MIR7515-201ENST00000637837 67 ntBASIC2.67□□□□□ -1.98
POLR1EQ9GZS1 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
POLR1EQ9GZS1 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.66□□□□□ -1.98
POLR1EQ9GZS1 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
POLR1EQ9GZS1 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
POLR1EQ9GZS1 MIR320C1-201ENST00000408566 88 ntBASIC2.66□□□□□ -1.98
POLR1EQ9GZS1 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.66□□□□□ -1.98
POLR1EQ9GZS1 HMGB1P49-201ENST00000418882 569 ntBASIC2.66□□□□□ -1.98
POLR1EQ9GZS1 RPS15AP5-201ENST00000436276 388 ntBASIC2.66□□□□□ -1.98
POLR1EQ9GZS1 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC2.66□□□□□ -1.98
POLR1EQ9GZS1 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC2.66□□□□□ -1.98
POLR1EQ9GZS1 AP000936.2-201ENST00000447151 681 ntBASIC2.66□□□□□ -1.98
POLR1EQ9GZS1 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC2.66□□□□□ -1.98
POLR1EQ9GZS1 AL160314.1-201ENST00000490836 438 ntBASIC2.66□□□□□ -1.98
POLR1EQ9GZS1 RPS15AP36-201ENST00000492022 382 ntBASIC2.66□□□□□ -1.98
POLR1EQ9GZS1 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.66□□□□□ -1.98
POLR1EQ9GZS1 CDC42P4-201ENST00000510507 563 ntBASIC2.66□□□□□ -1.98
POLR1EQ9GZS1 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC2.66□□□□□ -1.98
POLR1EQ9GZS1 RNA5SP282-201ENST00000516355 108 ntBASIC2.66□□□□□ -1.98
POLR1EQ9GZS1 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC2.66□□□□□ -1.98
POLR1EQ9GZS1 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC2.66□□□□□ -1.98
POLR1EQ9GZS1 MIR4319-201ENST00000577285 85 ntBASIC2.66□□□□□ -1.98
POLR1EQ9GZS1 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC2.66□□□□□ -1.98
POLR1EQ9GZS1 AC023043.3-201ENST00000593113 385 ntBASIC2.66□□□□□ -1.98
POLR1EQ9GZS1 AC136601.2-201ENST00000604356 474 ntBASIC2.66□□□□□ -1.98
POLR1EQ9GZS1 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC2.66□□□□□ -1.98
POLR1EQ9GZS1 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC2.66□□□□□ -1.98
POLR1EQ9GZS1 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
POLR1EQ9GZS1 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.65□□□□□ -1.98
POLR1EQ9GZS1 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
POLR1EQ9GZS1 SNORA5B-201ENST00000363786 132 ntBASIC2.65□□□□□ -1.99
POLR1EQ9GZS1 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
POLR1EQ9GZS1 MIR592-201ENST00000384959 97 ntBASIC2.65□□□□□ -1.99
POLR1EQ9GZS1 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
POLR1EQ9GZS1 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.65□□□□□ -1.99
POLR1EQ9GZS1 MIR888-201ENST00000401186 77 ntBASIC2.65□□□□□ -1.99
POLR1EQ9GZS1 AL513475.1-201ENST00000406602 315 ntBASIC2.65□□□□□ -1.99
POLR1EQ9GZS1 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
POLR1EQ9GZS1 RPLP0P7-201ENST00000416050 667 ntBASIC2.65□□□□□ -1.99
POLR1EQ9GZS1 ARL5AP4-201ENST00000430731 512 ntBASIC2.65□□□□□ -1.99
POLR1EQ9GZS1 AL445687.1-201ENST00000439946 251 ntBASIC2.65□□□□□ -1.99
POLR1EQ9GZS1 AC011816.1-201ENST00000441346 546 ntBASIC2.65□□□□□ -1.99
POLR1EQ9GZS1 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC2.65□□□□□ -1.99
POLR1EQ9GZS1 USP9YP10-201ENST00000454868 628 ntBASIC2.65□□□□□ -1.99
POLR1EQ9GZS1 RPS27AP9-201ENST00000477681 438 ntBASIC2.65□□□□□ -1.99
POLR1EQ9GZS1 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
POLR1EQ9GZS1 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC2.65□□□□□ -1.99
POLR1EQ9GZS1 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
POLR1EQ9GZS1 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC2.65□□□□□ -1.99
POLR1EQ9GZS1 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.65□□□□□ -1.99
POLR1EQ9GZS1 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC2.65□□□□□ -1.99
POLR1EQ9GZS1 AC106782.4-201ENST00000568264 210 ntBASIC2.65□□□□□ -1.99
POLR1EQ9GZS1 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC2.65□□□□□ -1.99
POLR1EQ9GZS1 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.65□□□□□ -1.99
POLR1EQ9GZS1 AC092608.2-201ENST00000624427 218 ntBASIC2.65□□□□□ -1.99
POLR1EQ9GZS1 AC135776.4-201ENST00000624300 1904 ntBASIC2.65□□□□□ -1.99
POLR1EQ9GZS1 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
POLR1EQ9GZS1 AC006378.2-201ENST00000623178 2476 ntBASIC2.65□□□□□ -1.99
POLR1EQ9GZS1 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
POLR1EQ9GZS1 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
POLR1EQ9GZS1 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC2.64□□□□□ -1.99
POLR1EQ9GZS1 AC062016.1-201ENST00000355719 319 ntBASIC2.64□□□□□ -1.99
POLR1EQ9GZS1 SNORD62.1-201ENST00000362541 86 ntBASIC2.64□□□□□ -1.99
POLR1EQ9GZS1 MIR34A-201ENST00000385130 110 ntBASIC2.64□□□□□ -1.99
POLR1EQ9GZS1 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
POLR1EQ9GZS1 RNU2-49P-201ENST00000410666 184 ntBASIC2.64□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 131.2 ms