Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 VN1R108P-201ENST00000431580 830 ntBASIC1.79□□□□□ -2.12
SCAPERQ9BY12 RPL31P20-201ENST00000449593 360 ntBASIC1.79□□□□□ -2.12
SCAPERQ9BY12 CCNB1IP1P3-201ENST00000454702 829 ntBASIC1.79□□□□□ -2.12
SCAPERQ9BY12 AC093801.2-201ENST00000503966 1050 ntBASIC1.79□□□□□ -2.12
SCAPERQ9BY12 DUXAP5-201ENST00000529668 529 ntBASIC1.79□□□□□ -2.12
SCAPERQ9BY12 AP003717.3-201ENST00000544832 1180 ntBASIC1.79□□□□□ -2.12
SCAPERQ9BY12 MTND4LP24-201ENST00000572277 291 ntBASIC1.79□□□□□ -2.12
SCAPERQ9BY12 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC1.79□□□□□ -2.12
SCAPERQ9BY12 PCNAP1-202ENST00000595299 752 ntBASIC1.79□□□□□ -2.12
SCAPERQ9BY12 AC135178.6-201ENST00000605314 398 ntBASIC1.79□□□□□ -2.12
SCAPERQ9BY12 AC021755.4-201ENST00000616620 456 ntBASIC1.79□□□□□ -2.12
SCAPERQ9BY12 MKKS-204ENST00000639674 192 ntBASIC1.79□□□□□ -2.12
SCAPERQ9BY12 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC1.79□□□□□ -2.12
SCAPERQ9BY12 AL031183.1-201ENST00000457667 207 ntBASIC1.78□□□□□ -2.12
SCAPERQ9BY12 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC1.78□□□□□ -2.12
SCAPERQ9BY12 SUMO2P6-201ENST00000505273 288 ntBASIC1.78□□□□□ -2.12
SCAPERQ9BY12 MRPS17P9-201ENST00000511924 393 ntBASIC1.78□□□□□ -2.12
SCAPERQ9BY12 AP005597.4-201ENST00000526762 229 ntBASIC1.78□□□□□ -2.12
SCAPERQ9BY12 MTND2P26-201ENST00000528255 1029 ntBASIC1.78□□□□□ -2.12
SCAPERQ9BY12 SDR42E1P2-201ENST00000614861 481 ntBASIC1.78□□□□□ -2.12
SCAPERQ9BY12 AC011472.4-201ENST00000615848 491 ntBASIC1.78□□□□□ -2.12
SCAPERQ9BY12 SDR42E1P4-201ENST00000620894 481 ntBASIC1.78□□□□□ -2.12
SCAPERQ9BY12 AC006963.1-201ENST00000624003 1052 ntBASIC1.78□□□□□ -2.12
SCAPERQ9BY12 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC1.78□□□□□ -2.12
SCAPERQ9BY12 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC1.78□□□□□ -2.12
SCAPERQ9BY12 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC1.78□□□□□ -2.12
SCAPERQ9BY12 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC1.77□□□□□ -2.13
SCAPERQ9BY12 MIR373-201ENST00000362273 69 ntBASIC1.77□□□□□ -2.13
SCAPERQ9BY12 RNU2-21P-201ENST00000410368 188 ntBASIC1.77□□□□□ -2.13
SCAPERQ9BY12 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.77□□□□□ -2.13
SCAPERQ9BY12 SNRPEP10-201ENST00000420249 274 ntBASIC1.77□□□□□ -2.13
SCAPERQ9BY12 UBE2D3P2-201ENST00000424409 445 ntBASIC1.77□□□□□ -2.13
SCAPERQ9BY12 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.77□□□□□ -2.13
SCAPERQ9BY12 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC1.77□□□□□ -2.13
SCAPERQ9BY12 MTCYBP29-201ENST00000436327 1006 ntBASIC1.77□□□□□ -2.13
SCAPERQ9BY12 snoU109.4-201ENST00000458953 143 ntBASIC1.77□□□□□ -2.13
SCAPERQ9BY12 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC1.77□□□□□ -2.13
SCAPERQ9BY12 AC105914.1-201ENST00000511798 226 ntBASIC1.77□□□□□ -2.13
SCAPERQ9BY12 RNU6-113P-201ENST00000516653 101 ntBASIC1.77□□□□□ -2.13
SCAPERQ9BY12 HSBP1P1-201ENST00000555205 166 ntBASIC1.77□□□□□ -2.13
SCAPERQ9BY12 AC022662.1-201ENST00000580252 331 ntBASIC1.77□□□□□ -2.13
SCAPERQ9BY12 AC004908.2-201ENST00000609090 574 ntBASIC1.77□□□□□ -2.13
SCAPERQ9BY12 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.77□□□□□ -2.13
SCAPERQ9BY12 SNORA18.2-201ENST00000383865 132 ntBASIC1.76□□□□□ -2.13
SCAPERQ9BY12 RNA5SP498-201ENST00000411342 120 ntBASIC1.76□□□□□ -2.13
SCAPERQ9BY12 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC1.76□□□□□ -2.13
SCAPERQ9BY12 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.76□□□□□ -2.13
SCAPERQ9BY12 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC1.76□□□□□ -2.13
SCAPERQ9BY12 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
SCAPERQ9BY12 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.76□□□□□ -2.13
SCAPERQ9BY12 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC1.76□□□□□ -2.13
SCAPERQ9BY12 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
SCAPERQ9BY12 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
SCAPERQ9BY12 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC1.76□□□□□ -2.13
SCAPERQ9BY12 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.76□□□□□ -2.13
SCAPERQ9BY12 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
SCAPERQ9BY12 HMGN1P14-201ENST00000412459 517 ntBASIC1.75□□□□□ -2.13
SCAPERQ9BY12 MTCYBP24-201ENST00000420387 1106 ntBASIC1.75□□□□□ -2.13
SCAPERQ9BY12 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC1.75□□□□□ -2.13
SCAPERQ9BY12 AL357134.1-201ENST00000445848 426 ntBASIC1.75□□□□□ -2.13
SCAPERQ9BY12 SNRPFP3-201ENST00000457792 225 ntBASIC1.75□□□□□ -2.13
SCAPERQ9BY12 AC087343.1-201ENST00000477341 475 ntBASIC1.75□□□□□ -2.13
SCAPERQ9BY12 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
SCAPERQ9BY12 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC1.75□□□□□ -2.13
SCAPERQ9BY12 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC1.75□□□□□ -2.13
SCAPERQ9BY12 COX6CP3-201ENST00000580869 223 ntBASIC1.75□□□□□ -2.13
SCAPERQ9BY12 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC1.75□□□□□ -2.13
SCAPERQ9BY12 AC008739.2-201ENST00000597006 317 ntBASIC1.75□□□□□ -2.13
SCAPERQ9BY12 Y_RNA.205-201ENST00000364128 113 ntBASIC1.74□□□□□ -2.13
SCAPERQ9BY12 RNU1-139P-201ENST00000391307 165 ntBASIC1.74□□□□□ -2.13
SCAPERQ9BY12 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC1.74□□□□□ -2.13
SCAPERQ9BY12 AL356867.1-201ENST00000429623 299 ntBASIC1.74□□□□□ -2.13
SCAPERQ9BY12 MTND5P25-201ENST00000430499 799 ntBASIC1.74□□□□□ -2.13
SCAPERQ9BY12 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC1.74□□□□□ -2.13
SCAPERQ9BY12 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC1.74□□□□□ -2.13
SCAPERQ9BY12 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC1.74□□□□□ -2.13
SCAPERQ9BY12 SYPL1P1-201ENST00000473622 768 ntBASIC1.74□□□□□ -2.13
SCAPERQ9BY12 MIR5000-201ENST00000577717 103 ntBASIC1.74□□□□□ -2.13
SCAPERQ9BY12 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC1.74□□□□□ -2.13
SCAPERQ9BY12 AL355297.2-201ENST00000604792 129 ntBASIC1.74□□□□□ -2.13
SCAPERQ9BY12 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC1.74□□□□□ -2.13
SCAPERQ9BY12 AL627230.6-201ENST00000611129 280 ntBASIC1.74□□□□□ -2.13
SCAPERQ9BY12 MIR7973-1-201ENST00000614683 76 ntBASIC1.74□□□□□ -2.13
SCAPERQ9BY12 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.74□□□□□ -2.13
SCAPERQ9BY12 AC009902.3-201ENST00000606235 2172 ntBASIC1.74□□□□□ -2.13
SCAPERQ9BY12 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
SCAPERQ9BY12 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.74□□□□□ -2.13
SCAPERQ9BY12 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC1.74□□□□□ -2.13
SCAPERQ9BY12 NUP35P2-201ENST00000416748 943 ntBASIC1.74□□□□□ -2.13
SCAPERQ9BY12 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC1.74□□□□□ -2.13
SCAPERQ9BY12 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC1.74□□□□□ -2.13
SCAPERQ9BY12 AC078857.1-201ENST00000469870 667 ntBASIC1.74□□□□□ -2.13
SCAPERQ9BY12 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC1.74□□□□□ -2.13
SCAPERQ9BY12 AC022880.1-201ENST00000534017 973 ntBASIC1.74□□□□□ -2.13
SCAPERQ9BY12 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC1.74□□□□□ -2.13
SCAPERQ9BY12 AC011712.1-201ENST00000588959 234 ntBASIC1.74□□□□□ -2.13
SCAPERQ9BY12 U73023.1-201ENST00000603134 700 ntBASIC1.74□□□□□ -2.13
SCAPERQ9BY12 AC012213.4-201ENST00000606457 354 ntBASIC1.74□□□□□ -2.13
SCAPERQ9BY12 AL138880.2-201ENST00000616214 239 ntBASIC1.74□□□□□ -2.13
SCAPERQ9BY12 MIR6076-201ENST00000617521 113 ntBASIC1.74□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 126 ms