Protein–RNA interactions for Protein: Q9BSE4

HERPUD2, Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 2 protein, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2Q9BSE4 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.69□□□□□ -1.82
HERPUD2Q9BSE4 MTND5P42-201ENST00000637720 498 ntBASIC3.69□□□□□ -1.82
HERPUD2Q9BSE4 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.69□□□□□ -1.82
HERPUD2Q9BSE4 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC3.69□□□□□ -1.82
HERPUD2Q9BSE4 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
HERPUD2Q9BSE4 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.69□□□□□ -1.82
HERPUD2Q9BSE4 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC3.68□□□□□ -1.82
HERPUD2Q9BSE4 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
HERPUD2Q9BSE4 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
HERPUD2Q9BSE4 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
HERPUD2Q9BSE4 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
HERPUD2Q9BSE4 SNORD9-201ENST00000362566 104 ntBASIC3.68□□□□□ -1.82
HERPUD2Q9BSE4 RNU6-169P-201ENST00000365336 107 ntBASIC3.68□□□□□ -1.82
HERPUD2Q9BSE4 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.68□□□□□ -1.82
HERPUD2Q9BSE4 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.68□□□□□ -1.82
HERPUD2Q9BSE4 MIR449B-201ENST00000384995 97 ntBASIC3.68□□□□□ -1.82
HERPUD2Q9BSE4 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC3.68□□□□□ -1.82
HERPUD2Q9BSE4 HMGN2P30-201ENST00000423237 256 ntBASIC3.68□□□□□ -1.82
HERPUD2Q9BSE4 ISCA1P1-201ENST00000426679 387 ntBASIC3.68□□□□□ -1.82
HERPUD2Q9BSE4 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
HERPUD2Q9BSE4 AL158071.1-201ENST00000430315 461 ntBASIC3.68□□□□□ -1.82
HERPUD2Q9BSE4 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC3.68□□□□□ -1.82
HERPUD2Q9BSE4 AL591212.2-201ENST00000433923 257 ntBASIC3.68□□□□□ -1.82
HERPUD2Q9BSE4 GOT2P5-201ENST00000433995 546 ntBASIC3.68□□□□□ -1.82
HERPUD2Q9BSE4 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC3.68□□□□□ -1.82
HERPUD2Q9BSE4 HSPD1P21-201ENST00000436541 245 ntBASIC3.68□□□□□ -1.82
HERPUD2Q9BSE4 RPL26P9-201ENST00000457466 433 ntBASIC3.68□□□□□ -1.82
HERPUD2Q9BSE4 RNU7-23P-201ENST00000459465 62 ntBASIC3.68□□□□□ -1.82
HERPUD2Q9BSE4 KLF3P2-201ENST00000465138 268 ntBASIC3.68□□□□□ -1.82
HERPUD2Q9BSE4 SLC25A15P5-201ENST00000508033 253 ntBASIC3.68□□□□□ -1.82
HERPUD2Q9BSE4 RNU1-95P-201ENST00000516357 160 ntBASIC3.68□□□□□ -1.82
HERPUD2Q9BSE4 RNU1-128P-201ENST00000516704 160 ntBASIC3.68□□□□□ -1.82
HERPUD2Q9BSE4 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.68□□□□□ -1.82
HERPUD2Q9BSE4 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC3.68□□□□□ -1.82
HERPUD2Q9BSE4 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC3.68□□□□□ -1.82
HERPUD2Q9BSE4 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC3.68□□□□□ -1.82
HERPUD2Q9BSE4 AC074050.1-201ENST00000563247 211 ntBASIC3.68□□□□□ -1.82
HERPUD2Q9BSE4 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC3.68□□□□□ -1.82
HERPUD2Q9BSE4 AC012213.3-201ENST00000577199 777 ntBASIC3.68□□□□□ -1.82
HERPUD2Q9BSE4 MIR4528-201ENST00000577763 90 ntBASIC3.68□□□□□ -1.82
HERPUD2Q9BSE4 AL136363.1-201ENST00000605349 337 ntBASIC3.68□□□□□ -1.82
HERPUD2Q9BSE4 RNVU1-4-201ENST00000612985 164 ntBASIC3.68□□□□□ -1.82
HERPUD2Q9BSE4 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC3.68□□□□□ -1.82
HERPUD2Q9BSE4 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
HERPUD2Q9BSE4 MTND5P7-201ENST00000413558 1798 ntBASIC3.68□□□□□ -1.82
HERPUD2Q9BSE4 ZNF285B-201ENST00000561698 1767 ntBASIC3.68□□□□□ -1.82
HERPUD2Q9BSE4 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.67□□□□□ -1.82
HERPUD2Q9BSE4 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.67□□□□□ -1.82
HERPUD2Q9BSE4 FRG1CP-201ENST00000358464 769 ntBASIC3.67□□□□□ -1.82
HERPUD2Q9BSE4 RNU1-105P-201ENST00000363470 161 ntBASIC3.67□□□□□ -1.82
HERPUD2Q9BSE4 RNU4-40P-201ENST00000364351 143 ntBASIC3.67□□□□□ -1.82
HERPUD2Q9BSE4 SNORA5A-201ENST00000384111 134 ntBASIC3.67□□□□□ -1.82
HERPUD2Q9BSE4 RNU6-348P-201ENST00000384386 107 ntBASIC3.67□□□□□ -1.82
HERPUD2Q9BSE4 RNA5SP354-201ENST00000391247 136 ntBASIC3.67□□□□□ -1.82
HERPUD2Q9BSE4 SNORA48.8-201ENST00000391324 134 ntBASIC3.67□□□□□ -1.82
HERPUD2Q9BSE4 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC3.67□□□□□ -1.82
HERPUD2Q9BSE4 PIGFP2-201ENST00000421400 651 ntBASIC3.67□□□□□ -1.82
HERPUD2Q9BSE4 RPL23AP30-201ENST00000432419 501 ntBASIC3.67□□□□□ -1.82
HERPUD2Q9BSE4 AL353706.1-201ENST00000436728 494 ntBASIC3.67□□□□□ -1.82
HERPUD2Q9BSE4 MTND4P32-201ENST00000437189 1237 ntBASIC3.67□□□□□ -1.82
HERPUD2Q9BSE4 RGS5-217ENST00000451759 835 ntTSL 3 BASIC3.67□□□□□ -1.82
HERPUD2Q9BSE4 FABP5P15-201ENST00000453566 214 ntBASIC3.67□□□□□ -1.82
HERPUD2Q9BSE4 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC3.67□□□□□ -1.82
HERPUD2Q9BSE4 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.67□□□□□ -1.82
HERPUD2Q9BSE4 RPS4XP2-201ENST00000458402 793 ntBASIC3.67□□□□□ -1.82
HERPUD2Q9BSE4 AC004801.2-202ENST00000463559 283 ntBASIC3.67□□□□□ -1.82
HERPUD2Q9BSE4 RPS15AP34-201ENST00000487776 387 ntBASIC3.67□□□□□ -1.82
HERPUD2Q9BSE4 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC3.67□□□□□ -1.82
HERPUD2Q9BSE4 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.67□□□□□ -1.82
HERPUD2Q9BSE4 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
HERPUD2Q9BSE4 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC3.67□□□□□ -1.82
HERPUD2Q9BSE4 RNU6-1220P-201ENST00000517126 108 ntBASIC3.67□□□□□ -1.82
HERPUD2Q9BSE4 AC026403.1-201ENST00000518938 295 ntBASIC3.67□□□□□ -1.82
HERPUD2Q9BSE4 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3.67□□□□□ -1.82
HERPUD2Q9BSE4 AL391261.3-201ENST00000557194 520 ntBASIC3.67□□□□□ -1.82
HERPUD2Q9BSE4 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.67□□□□□ -1.82
HERPUD2Q9BSE4 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC3.67□□□□□ -1.82
HERPUD2Q9BSE4 MIR3186-201ENST00000577404 85 ntBASIC3.67□□□□□ -1.82
HERPUD2Q9BSE4 MIR3913-1-201ENST00000577744 102 ntBASIC3.67□□□□□ -1.82
HERPUD2Q9BSE4 AC008739.3-201ENST00000603262 127 ntBASIC3.67□□□□□ -1.82
HERPUD2Q9BSE4 MTND4LP5-201ENST00000605152 292 ntBASIC3.67□□□□□ -1.82
HERPUD2Q9BSE4 AC022893.3-201ENST00000607665 437 ntBASIC3.67□□□□□ -1.82
HERPUD2Q9BSE4 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.67□□□□□ -1.82
HERPUD2Q9BSE4 AC093783.1-201ENST00000612976 329 ntBASIC3.67□□□□□ -1.82
HERPUD2Q9BSE4 MIR6075-201ENST00000620782 95 ntBASIC3.67□□□□□ -1.82
HERPUD2Q9BSE4 U4.6-201ENST00000621618 127 ntBASIC3.67□□□□□ -1.82
HERPUD2Q9BSE4 SNORA50A-202ENST00000629536 136 ntBASIC3.67□□□□□ -1.82
HERPUD2Q9BSE4 TNPO1P3-201ENST00000436471 2662 ntBASIC3.67□□□□□ -1.82
HERPUD2Q9BSE4 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
HERPUD2Q9BSE4 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
HERPUD2Q9BSE4 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
HERPUD2Q9BSE4 Y_RNA.51-201ENST00000362725 102 ntBASIC3.66□□□□□ -1.82
HERPUD2Q9BSE4 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC3.66□□□□□ -1.82
HERPUD2Q9BSE4 SNORA75-201ENST00000384158 137 ntBASIC3.66□□□□□ -1.82
HERPUD2Q9BSE4 MTND3P17-201ENST00000416968 344 ntBASIC3.66□□□□□ -1.82
HERPUD2Q9BSE4 AL035423.1-201ENST00000420331 213 ntBASIC3.66□□□□□ -1.82
HERPUD2Q9BSE4 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
HERPUD2Q9BSE4 AL592045.1-201ENST00000429867 352 ntBASIC3.66□□□□□ -1.82
HERPUD2Q9BSE4 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC3.66□□□□□ -1.82
HERPUD2Q9BSE4 RPL36AP6-201ENST00000435770 321 ntBASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms