Protein–RNA interactions for Protein: Q96MW1

CCDC43, Coiled-coil domain-containing protein 43, humanhuman

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43Q96MW1 RNU6-157P-201ENST00000383957 107 ntBASIC3.03□□□□□ -1.92
CCDC43Q96MW1 BTF3L4P3-201ENST00000418879 476 ntBASIC3.03□□□□□ -1.92
CCDC43Q96MW1 ARL5AP4-201ENST00000430731 512 ntBASIC3.03□□□□□ -1.92
CCDC43Q96MW1 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.03□□□□□ -1.92
CCDC43Q96MW1 MTATP6P30-201ENST00000443540 664 ntBASIC3.03□□□□□ -1.92
CCDC43Q96MW1 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC3.03□□□□□ -1.92
CCDC43Q96MW1 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.03□□□□□ -1.92
CCDC43Q96MW1 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC3.03□□□□□ -1.92
CCDC43Q96MW1 SNORD109B-201ENST00000458961 67 ntBASIC3.03□□□□□ -1.92
CCDC43Q96MW1 SNORD109A-201ENST00000459128 67 ntBASIC3.03□□□□□ -1.92
CCDC43Q96MW1 AL160314.1-201ENST00000490836 438 ntBASIC3.03□□□□□ -1.92
CCDC43Q96MW1 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.03□□□□□ -1.92
CCDC43Q96MW1 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC3.03□□□□□ -1.92
CCDC43Q96MW1 AC114786.4-201ENST00000508771 728 ntBASIC3.03□□□□□ -1.92
CCDC43Q96MW1 AC114797.1-201ENST00000514003 728 ntBASIC3.03□□□□□ -1.92
CCDC43Q96MW1 AC110760.3-202ENST00000515177 371 ntBASIC3.03□□□□□ -1.92
CCDC43Q96MW1 RNA5SP356-201ENST00000515972 94 ntBASIC3.03□□□□□ -1.92
CCDC43Q96MW1 ATP5F1P5-201ENST00000526403 760 ntBASIC3.03□□□□□ -1.92
CCDC43Q96MW1 ELOCP31-201ENST00000540463 467 ntBASIC3.03□□□□□ -1.92
CCDC43Q96MW1 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC3.03□□□□□ -1.92
CCDC43Q96MW1 GLYCAM1-201ENST00000546596 285 ntBASIC3.03□□□□□ -1.92
CCDC43Q96MW1 AC123904.3-201ENST00000547218 814 ntBASIC3.03□□□□□ -1.92
CCDC43Q96MW1 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC3.03□□□□□ -1.92
CCDC43Q96MW1 AC007954.1-201ENST00000554198 494 ntBASIC3.03□□□□□ -1.92
CCDC43Q96MW1 DUXAP1-201ENST00000556632 463 ntBASIC3.03□□□□□ -1.92
CCDC43Q96MW1 MTND4P33-201ENST00000556706 766 ntBASIC3.03□□□□□ -1.92
CCDC43Q96MW1 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC3.03□□□□□ -1.92
CCDC43Q96MW1 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC3.03□□□□□ -1.92
CCDC43Q96MW1 MIR4319-201ENST00000577285 85 ntBASIC3.03□□□□□ -1.92
CCDC43Q96MW1 AC103810.1-201ENST00000579873 453 ntBASIC3.03□□□□□ -1.92
CCDC43Q96MW1 AC021171.1-201ENST00000603137 706 ntBASIC3.03□□□□□ -1.92
CCDC43Q96MW1 AL033523.1-201ENST00000605153 153 ntBASIC3.03□□□□□ -1.92
CCDC43Q96MW1 AC131902.3-201ENST00000611767 581 ntBASIC3.03□□□□□ -1.92
CCDC43Q96MW1 AC079395.3-201ENST00000615161 484 ntBASIC3.03□□□□□ -1.92
CCDC43Q96MW1 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.03□□□□□ -1.92
CCDC43Q96MW1 AL078595.3-201ENST00000623815 1166 ntBASIC3.03□□□□□ -1.92
CCDC43Q96MW1 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC3.03□□□□□ -1.92
CCDC43Q96MW1 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
CCDC43Q96MW1 AC092125.1-201ENST00000562568 1995 ntBASIC3.02□□□□□ -1.93
CCDC43Q96MW1 RNU6-433P-201ENST00000363216 104 ntBASIC3.02□□□□□ -1.93
CCDC43Q96MW1 RNU1-112P-201ENST00000364401 164 ntBASIC3.02□□□□□ -1.93
CCDC43Q96MW1 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC3.02□□□□□ -1.93
CCDC43Q96MW1 MIR196B-201ENST00000384852 84 ntBASIC3.02□□□□□ -1.93
CCDC43Q96MW1 MIR19A-201ENST00000384878 82 ntBASIC3.02□□□□□ -1.93
CCDC43Q96MW1 MIR627-201ENST00000384979 97 ntBASIC3.02□□□□□ -1.93
CCDC43Q96MW1 MIR9-1-201ENST00000385198 89 ntBASIC3.02□□□□□ -1.93
CCDC43Q96MW1 MIR887-201ENST00000401258 79 ntBASIC3.02□□□□□ -1.93
CCDC43Q96MW1 MTCO2P21-201ENST00000419780 677 ntBASIC3.02□□□□□ -1.93
CCDC43Q96MW1 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC3.02□□□□□ -1.93
CCDC43Q96MW1 AL358075.3-201ENST00000426289 226 ntBASIC3.02□□□□□ -1.93
CCDC43Q96MW1 USP12PX-201ENST00000432383 1057 ntBASIC3.02□□□□□ -1.93
CCDC43Q96MW1 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC3.02□□□□□ -1.93
CCDC43Q96MW1 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC3.02□□□□□ -1.93
CCDC43Q96MW1 ELOCP30-201ENST00000447108 299 ntBASIC3.02□□□□□ -1.93
CCDC43Q96MW1 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.02□□□□□ -1.93
CCDC43Q96MW1 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC3.02□□□□□ -1.93
CCDC43Q96MW1 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC3.02□□□□□ -1.93
CCDC43Q96MW1 AL590639.1-201ENST00000456484 337 ntBASIC3.02□□□□□ -1.93
CCDC43Q96MW1 AC106872.3-201ENST00000495104 446 ntBASIC3.02□□□□□ -1.93
CCDC43Q96MW1 SEM1P1-201ENST00000506694 209 ntBASIC3.02□□□□□ -1.93
CCDC43Q96MW1 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC3.02□□□□□ -1.93
CCDC43Q96MW1 HSPE1P20-201ENST00000538133 289 ntBASIC3.02□□□□□ -1.93
CCDC43Q96MW1 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC3.02□□□□□ -1.93
CCDC43Q96MW1 AC079600.2-201ENST00000550076 130 ntBASIC3.02□□□□□ -1.93
CCDC43Q96MW1 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC3.02□□□□□ -1.93
CCDC43Q96MW1 AC025281.1-201ENST00000567026 265 ntBASIC3.02□□□□□ -1.93
CCDC43Q96MW1 AC136618.2-201ENST00000575091 400 ntBASIC3.02□□□□□ -1.93
CCDC43Q96MW1 MIR544B-201ENST00000582372 78 ntBASIC3.02□□□□□ -1.93
CCDC43Q96MW1 ABBA01006766.1-201ENST00000584728 294 ntBASIC3.02□□□□□ -1.93
CCDC43Q96MW1 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC3.02□□□□□ -1.93
CCDC43Q96MW1 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
CCDC43Q96MW1 AC007038.2-201ENST00000608095 740 ntBASIC3.02□□□□□ -1.93
CCDC43Q96MW1 AC004908.2-201ENST00000609090 574 ntBASIC3.02□□□□□ -1.93
CCDC43Q96MW1 AC016597.2-201ENST00000613256 341 ntBASIC3.02□□□□□ -1.93
CCDC43Q96MW1 AL139418.1-201ENST00000613613 177 ntBASIC3.02□□□□□ -1.93
CCDC43Q96MW1 AC012150.2-201ENST00000621300 544 ntBASIC3.02□□□□□ -1.93
CCDC43Q96MW1 AC097655.1-201ENST00000635075 318 ntBASIC3.02□□□□□ -1.93
CCDC43Q96MW1 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3.02□□□□□ -1.93
CCDC43Q96MW1 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.01□□□□□ -1.93
CCDC43Q96MW1 AL355596.1-201ENST00000565399 3996 ntBASIC3.01□□□□□ -1.93
CCDC43Q96MW1 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.01□□□□□ -1.93
CCDC43Q96MW1 RPL21P132-201ENST00000331267 462 ntBASIC3.01□□□□□ -1.93
CCDC43Q96MW1 AL356057.2-201ENST00000403318 432 ntBASIC3.01□□□□□ -1.93
CCDC43Q96MW1 CCNG1P1-201ENST00000406783 885 ntBASIC3.01□□□□□ -1.93
CCDC43Q96MW1 MIR1305-201ENST00000408300 86 ntBASIC3.01□□□□□ -1.93
CCDC43Q96MW1 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC3.01□□□□□ -1.93
CCDC43Q96MW1 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC3.01□□□□□ -1.93
CCDC43Q96MW1 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC3.01□□□□□ -1.93
CCDC43Q96MW1 AC063976.3-201ENST00000426849 329 ntBASIC3.01□□□□□ -1.93
CCDC43Q96MW1 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC3.01□□□□□ -1.93
CCDC43Q96MW1 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC3.01□□□□□ -1.93
CCDC43Q96MW1 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC3.01□□□□□ -1.93
CCDC43Q96MW1 AC103975.1-201ENST00000482506 483 ntBASIC3.01□□□□□ -1.93
CCDC43Q96MW1 RPL36AP51-201ENST00000487216 318 ntBASIC3.01□□□□□ -1.93
CCDC43Q96MW1 RN7SKP132-201ENST00000516001 208 ntBASIC3.01□□□□□ -1.93
CCDC43Q96MW1 SCARNA1-201ENST00000517138 166 ntBASIC3.01□□□□□ -1.93
CCDC43Q96MW1 AC105185.1-201ENST00000518705 535 ntBASIC3.01□□□□□ -1.93
CCDC43Q96MW1 MTCO2P15-201ENST00000532655 656 ntBASIC3.01□□□□□ -1.93
CCDC43Q96MW1 AC007115.1-201ENST00000546853 234 ntBASIC3.01□□□□□ -1.93
CCDC43Q96MW1 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 130.8 ms