Protein–RNA interactions for Protein: Q96K76

USP47, Ubiquitin carboxyl-terminal hydrolase 47, humanhuman

Predictions only

Length 1,375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP47Q96K76 AL359273.1-201ENST00000510918 627 ntBASIC2.68□□□□□ -1.98
USP47Q96K76 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC2.68□□□□□ -1.98
USP47Q96K76 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
USP47Q96K76 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC2.68□□□□□ -1.98
USP47Q96K76 DEFB130C-202ENST00000530001 230 ntBASIC2.68□□□□□ -1.98
USP47Q96K76 SETP2-201ENST00000553886 926 ntBASIC2.68□□□□□ -1.98
USP47Q96K76 HSPE1P3-201ENST00000559254 309 ntBASIC2.68□□□□□ -1.98
USP47Q96K76 AC090695.1-201ENST00000561269 1222 ntBASIC2.68□□□□□ -1.98
USP47Q96K76 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC2.68□□□□□ -1.98
USP47Q96K76 MIR4637-201ENST00000582405 84 ntBASIC2.68□□□□□ -1.98
USP47Q96K76 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC2.68□□□□□ -1.98
USP47Q96K76 AC011330.2-201ENST00000621680 635 ntBASIC2.68□□□□□ -1.98
USP47Q96K76 AC090772.4-201ENST00000623599 362 ntBASIC2.68□□□□□ -1.98
USP47Q96K76 AP000676.4-201ENST00000624659 623 ntBASIC2.68□□□□□ -1.98
USP47Q96K76 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
USP47Q96K76 AC008568.2-201ENST00000623862 2313 ntBASIC2.67□□□□□ -1.98
USP47Q96K76 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC2.67□□□□□ -1.98
USP47Q96K76 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
USP47Q96K76 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
USP47Q96K76 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.67□□□□□ -1.98
USP47Q96K76 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
USP47Q96K76 VTRNA1-1-201ENST00000363120 99 ntBASIC2.67□□□□□ -1.98
USP47Q96K76 MIR9-3-201ENST00000385084 90 ntBASIC2.67□□□□□ -1.98
USP47Q96K76 AC069282.1-201ENST00000411911 526 ntBASIC2.67□□□□□ -1.98
USP47Q96K76 MTATP6P27-201ENST00000416987 621 ntBASIC2.67□□□□□ -1.98
USP47Q96K76 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC2.67□□□□□ -1.98
USP47Q96K76 AC108667.1-201ENST00000428618 249 ntBASIC2.67□□□□□ -1.98
USP47Q96K76 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC2.67□□□□□ -1.98
USP47Q96K76 OR4K11P-201ENST00000431829 904 ntBASIC2.67□□□□□ -1.98
USP47Q96K76 LSM1P1-201ENST00000438629 273 ntBASIC2.67□□□□□ -1.98
USP47Q96K76 THAP5P1-201ENST00000439089 262 ntBASIC2.67□□□□□ -1.98
USP47Q96K76 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC2.67□□□□□ -1.98
USP47Q96K76 RPL23AP58-201ENST00000440453 469 ntBASIC2.67□□□□□ -1.98
USP47Q96K76 FABP5P13-201ENST00000452144 328 ntBASIC2.67□□□□□ -1.98
USP47Q96K76 AC010099.1-201ENST00000455434 375 ntBASIC2.67□□□□□ -1.98
USP47Q96K76 RPS29P12-201ENST00000460178 152 ntBASIC2.67□□□□□ -1.98
USP47Q96K76 AC073901.1-201ENST00000462471 408 ntBASIC2.67□□□□□ -1.98
USP47Q96K76 AL049714.1-201ENST00000466686 347 ntBASIC2.67□□□□□ -1.98
USP47Q96K76 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
USP47Q96K76 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC2.67□□□□□ -1.98
USP47Q96K76 AC016550.1-201ENST00000505348 785 ntBASIC2.67□□□□□ -1.98
USP47Q96K76 AC112198.4-201ENST00000515450 351 ntBASIC2.67□□□□□ -1.98
USP47Q96K76 AC087808.1-201ENST00000520501 361 ntBASIC2.67□□□□□ -1.98
USP47Q96K76 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.67□□□□□ -1.98
USP47Q96K76 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC2.67□□□□□ -1.98
USP47Q96K76 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC2.67□□□□□ -1.98
USP47Q96K76 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC2.67□□□□□ -1.98
USP47Q96K76 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC2.67□□□□□ -1.98
USP47Q96K76 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC2.67□□□□□ -1.98
USP47Q96K76 AC068620.3-201ENST00000602749 560 ntBASIC2.67□□□□□ -1.98
USP47Q96K76 AP000254.1-201ENST00000609934 520 ntBASIC2.67□□□□□ -1.98
USP47Q96K76 AC120349.2-201ENST00000625002 298 ntBASIC2.67□□□□□ -1.98
USP47Q96K76 MIR1322-201ENST00000638013 71 ntBASIC2.67□□□□□ -1.98
USP47Q96K76 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
USP47Q96K76 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
USP47Q96K76 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.66□□□□□ -1.98
USP47Q96K76 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
USP47Q96K76 AL161449.1-201ENST00000414531 1199 ntBASIC2.66□□□□□ -1.98
USP47Q96K76 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC2.66□□□□□ -1.98
USP47Q96K76 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC2.66□□□□□ -1.98
USP47Q96K76 GTF2IP7-202ENST00000436677 309 ntBASIC2.66□□□□□ -1.98
USP47Q96K76 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
USP47Q96K76 SETP11-201ENST00000473027 690 ntBASIC2.66□□□□□ -1.98
USP47Q96K76 AC008427.1-201ENST00000503102 655 ntBASIC2.66□□□□□ -1.98
USP47Q96K76 AC109464.2-201ENST00000510242 943 ntBASIC2.66□□□□□ -1.98
USP47Q96K76 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC2.66□□□□□ -1.98
USP47Q96K76 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
USP47Q96K76 MIR3609-201ENST00000582661 80 ntBASIC2.66□□□□□ -1.98
USP47Q96K76 AC105224.1-201ENST00000587055 421 ntBASIC2.66□□□□□ -1.98
USP47Q96K76 AC080013.4-201ENST00000607624 649 ntBASIC2.66□□□□□ -1.98
USP47Q96K76 DUXAP10-204ENST00000612052 616 ntBASIC2.66□□□□□ -1.98
USP47Q96K76 AC002064.3-201ENST00000623448 346 ntBASIC2.66□□□□□ -1.98
USP47Q96K76 AC126544.2-201ENST00000625174 749 ntBASIC2.66□□□□□ -1.98
USP47Q96K76 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC2.66□□□□□ -1.98
USP47Q96K76 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.66□□□□□ -1.98
USP47Q96K76 AP005901.5-201ENST00000545779 1796 ntBASIC2.66□□□□□ -1.98
USP47Q96K76 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
USP47Q96K76 SNORA40.4-201ENST00000390971 128 ntBASIC2.65□□□□□ -1.98
USP47Q96K76 MTCO1P56-201ENST00000401674 224 ntBASIC2.65□□□□□ -1.98
USP47Q96K76 RPL19P1-201ENST00000411635 428 ntBASIC2.65□□□□□ -1.98
USP47Q96K76 AC096533.1-201ENST00000411645 353 ntBASIC2.65□□□□□ -1.98
USP47Q96K76 HMGN2P35-201ENST00000412164 270 ntBASIC2.65□□□□□ -1.98
USP47Q96K76 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.65□□□□□ -1.98
USP47Q96K76 AL592310.1-201ENST00000414330 671 ntBASIC2.65□□□□□ -1.98
USP47Q96K76 USP9YP21-201ENST00000420603 432 ntBASIC2.65□□□□□ -1.98
USP47Q96K76 MTCYBP45-201ENST00000435243 565 ntBASIC2.65□□□□□ -1.98
USP47Q96K76 RPL26P6-201ENST00000440913 438 ntBASIC2.65□□□□□ -1.98
USP47Q96K76 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.65□□□□□ -1.98
USP47Q96K76 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC2.65□□□□□ -1.98
USP47Q96K76 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.98
USP47Q96K76 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC2.65□□□□□ -1.98
USP47Q96K76 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.65□□□□□ -1.98
USP47Q96K76 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC2.65□□□□□ -1.98
USP47Q96K76 RNA5SP182-201ENST00000516064 82 ntBASIC2.65□□□□□ -1.98
USP47Q96K76 RNU1-40P-201ENST00000516816 164 ntBASIC2.65□□□□□ -1.98
USP47Q96K76 RNU1-97P-201ENST00000516872 164 ntBASIC2.65□□□□□ -1.98
USP47Q96K76 AC022861.1-201ENST00000522981 663 ntBASIC2.65□□□□□ -1.98
USP47Q96K76 GNAI2P1-201ENST00000541815 315 ntBASIC2.65□□□□□ -1.98
USP47Q96K76 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC2.65□□□□□ -1.98
USP47Q96K76 MIR3921-201ENST00000577308 85 ntBASIC2.65□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 137.5 ms