Protein–RNA interactions for Protein: Q96CM3

RPUSD4, Mitochondrial RNA pseudouridine synthase RPUSD4, humanhuman

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4Q96CM3 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.31□□□□□ -2.04
RPUSD4Q96CM3 RNU6-270P-201ENST00000364131 105 ntBASIC2.31□□□□□ -2.04
RPUSD4Q96CM3 RNU1-39P-201ENST00000383897 165 ntBASIC2.31□□□□□ -2.04
RPUSD4Q96CM3 RNU6-217P-201ENST00000384164 104 ntBASIC2.31□□□□□ -2.04
RPUSD4Q96CM3 MIR134-201ENST00000385258 73 ntBASIC2.31□□□□□ -2.04
RPUSD4Q96CM3 U3.19-201ENST00000390893 196 ntBASIC2.31□□□□□ -2.04
RPUSD4Q96CM3 CASP3-203ENST00000393588 677 ntTSL 4 BASIC2.31□□□□□ -2.04
RPUSD4Q96CM3 RPS20P2-201ENST00000402520 389 ntBASIC2.31□□□□□ -2.04
RPUSD4Q96CM3 EIF4EBP2P3-201ENST00000403144 334 ntBASIC2.31□□□□□ -2.04
RPUSD4Q96CM3 RNU2-25P-201ENST00000411041 191 ntBASIC2.31□□□□□ -2.04
RPUSD4Q96CM3 RPL21P24-201ENST00000413752 448 ntBASIC2.31□□□□□ -2.04
RPUSD4Q96CM3 ZNF90P2-204ENST00000419323 1075 ntBASIC2.31□□□□□ -2.04
RPUSD4Q96CM3 B3GALNT1P1-201ENST00000420569 975 ntBASIC2.31□□□□□ -2.04
RPUSD4Q96CM3 AC069157.1-201ENST00000421749 137 ntBASIC2.31□□□□□ -2.04
RPUSD4Q96CM3 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC2.31□□□□□ -2.04
RPUSD4Q96CM3 AC091390.3-201ENST00000426478 338 ntBASIC2.31□□□□□ -2.04
RPUSD4Q96CM3 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC2.31□□□□□ -2.04
RPUSD4Q96CM3 AL512844.2-201ENST00000433990 593 ntBASIC2.31□□□□□ -2.04
RPUSD4Q96CM3 AC092573.2-201ENST00000434546 243 ntBASIC2.31□□□□□ -2.04
RPUSD4Q96CM3 TIMM9P1-201ENST00000436122 256 ntBASIC2.31□□□□□ -2.04
RPUSD4Q96CM3 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC2.31□□□□□ -2.04
RPUSD4Q96CM3 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC2.31□□□□□ -2.04
RPUSD4Q96CM3 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC2.31□□□□□ -2.04
RPUSD4Q96CM3 ZNF736P5Y-201ENST00000451173 805 ntBASIC2.31□□□□□ -2.04
RPUSD4Q96CM3 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2.31□□□□□ -2.04
RPUSD4Q96CM3 MTND2P24-201ENST00000453434 806 ntBASIC2.31□□□□□ -2.04
RPUSD4Q96CM3 AC010099.1-201ENST00000455434 375 ntBASIC2.31□□□□□ -2.04
RPUSD4Q96CM3 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC2.31□□□□□ -2.04
RPUSD4Q96CM3 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.31□□□□□ -2.04
RPUSD4Q96CM3 AC008155.2-201ENST00000464337 397 ntBASIC2.31□□□□□ -2.04
RPUSD4Q96CM3 AC068587.2-201ENST00000478386 781 ntBASIC2.31□□□□□ -2.04
RPUSD4Q96CM3 AC112204.1-201ENST00000502591 103 ntBASIC2.31□□□□□ -2.04
RPUSD4Q96CM3 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC2.31□□□□□ -2.04
RPUSD4Q96CM3 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC2.31□□□□□ -2.04
RPUSD4Q96CM3 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
RPUSD4Q96CM3 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC2.31□□□□□ -2.04
RPUSD4Q96CM3 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC2.31□□□□□ -2.04
RPUSD4Q96CM3 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
RPUSD4Q96CM3 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC2.31□□□□□ -2.04
RPUSD4Q96CM3 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC2.31□□□□□ -2.04
RPUSD4Q96CM3 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
RPUSD4Q96CM3 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC2.31□□□□□ -2.04
RPUSD4Q96CM3 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC2.31□□□□□ -2.04
RPUSD4Q96CM3 AC090888.1-201ENST00000561335 1141 ntBASIC2.31□□□□□ -2.04
RPUSD4Q96CM3 AC034105.4-201ENST00000568304 277 ntBASIC2.31□□□□□ -2.04
RPUSD4Q96CM3 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC2.31□□□□□ -2.04
RPUSD4Q96CM3 AF038458.1-201ENST00000588406 262 ntBASIC2.31□□□□□ -2.04
RPUSD4Q96CM3 AC020895.1-201ENST00000595362 272 ntBASIC2.31□□□□□ -2.04
RPUSD4Q96CM3 KC877982.1-201ENST00000602313 470 ntBASIC2.31□□□□□ -2.04
RPUSD4Q96CM3 WISP1-OT1-201ENST00000602893 642 ntBASIC2.31□□□□□ -2.04
RPUSD4Q96CM3 AC103710.1-201ENST00000610003 901 ntBASIC2.31□□□□□ -2.04
RPUSD4Q96CM3 AC245517.5-201ENST00000611529 162 ntBASIC2.31□□□□□ -2.04
RPUSD4Q96CM3 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC2.31□□□□□ -2.04
RPUSD4Q96CM3 uc_338.12-201ENST00000616344 181 ntBASIC2.31□□□□□ -2.04
RPUSD4Q96CM3 AC104010.1-201ENST00000616889 150 ntBASIC2.31□□□□□ -2.04
RPUSD4Q96CM3 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC2.31□□□□□ -2.04
RPUSD4Q96CM3 AC244100.1-202ENST00000621554 382 ntBASIC2.31□□□□□ -2.04
RPUSD4Q96CM3 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.31□□□□□ -2.04
RPUSD4Q96CM3 AC092192.1-201ENST00000633154 1018 ntBASIC2.31□□□□□ -2.04
RPUSD4Q96CM3 OR5H6-203ENST00000642105 978 ntBASIC2.31□□□□□ -2.04
RPUSD4Q96CM3 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC2.31□□□□□ -2.04
RPUSD4Q96CM3 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.3□□□□□ -2.04
RPUSD4Q96CM3 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC2.3□□□□□ -2.04
RPUSD4Q96CM3 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
RPUSD4Q96CM3 RNU5F-6P-201ENST00000362979 116 ntBASIC2.3□□□□□ -2.04
RPUSD4Q96CM3 RNA5SP252-201ENST00000391131 119 ntBASIC2.3□□□□□ -2.04
RPUSD4Q96CM3 AL353678.1-201ENST00000422735 741 ntBASIC2.3□□□□□ -2.04
RPUSD4Q96CM3 SUMO1P4-201ENST00000429430 302 ntBASIC2.3□□□□□ -2.04
RPUSD4Q96CM3 GCA-203ENST00000429691 824 ntTSL 3 BASIC2.3□□□□□ -2.04
RPUSD4Q96CM3 AL159987.2-201ENST00000432754 307 ntBASIC2.3□□□□□ -2.04
RPUSD4Q96CM3 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.3□□□□□ -2.04
RPUSD4Q96CM3 AC118469.1-201ENST00000442943 488 ntBASIC2.3□□□□□ -2.04
RPUSD4Q96CM3 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
RPUSD4Q96CM3 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC2.3□□□□□ -2.04
RPUSD4Q96CM3 RNU7-125P-201ENST00000458760 62 ntBASIC2.3□□□□□ -2.04
RPUSD4Q96CM3 AC010631.1-201ENST00000474150 156 ntBASIC2.3□□□□□ -2.04
RPUSD4Q96CM3 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC2.3□□□□□ -2.04
RPUSD4Q96CM3 AC090525.1-201ENST00000479116 478 ntBASIC2.3□□□□□ -2.04
RPUSD4Q96CM3 LARP1BP2-201ENST00000486594 519 ntBASIC2.3□□□□□ -2.04
RPUSD4Q96CM3 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC2.3□□□□□ -2.04
RPUSD4Q96CM3 SNORA31.3-201ENST00000516029 96 ntBASIC2.3□□□□□ -2.04
RPUSD4Q96CM3 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.3□□□□□ -2.04
RPUSD4Q96CM3 RNU6-64P-201ENST00000517119 105 ntBASIC2.3□□□□□ -2.04
RPUSD4Q96CM3 RN7SKP258-201ENST00000517151 304 ntBASIC2.3□□□□□ -2.04
RPUSD4Q96CM3 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.3□□□□□ -2.04
RPUSD4Q96CM3 AP002748.2-201ENST00000528671 348 ntBASIC2.3□□□□□ -2.04
RPUSD4Q96CM3 AC007115.1-201ENST00000546853 234 ntBASIC2.3□□□□□ -2.04
RPUSD4Q96CM3 AC123904.3-201ENST00000547218 814 ntBASIC2.3□□□□□ -2.04
RPUSD4Q96CM3 AC093012.1-202ENST00000549403 582 ntBASIC2.3□□□□□ -2.04
RPUSD4Q96CM3 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC2.3□□□□□ -2.04
RPUSD4Q96CM3 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.3□□□□□ -2.04
RPUSD4Q96CM3 RPS3AP4-201ENST00000555161 764 ntBASIC2.3□□□□□ -2.04
RPUSD4Q96CM3 MIR3146-201ENST00000580367 79 ntBASIC2.3□□□□□ -2.04
RPUSD4Q96CM3 MIR5194-201ENST00000582634 120 ntBASIC2.3□□□□□ -2.04
RPUSD4Q96CM3 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC2.3□□□□□ -2.04
RPUSD4Q96CM3 ELOCP35-201ENST00000604289 336 ntBASIC2.3□□□□□ -2.04
RPUSD4Q96CM3 AL022161.1-201ENST00000604390 213 ntBASIC2.3□□□□□ -2.04
RPUSD4Q96CM3 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC2.3□□□□□ -2.04
RPUSD4Q96CM3 AC092354.1-201ENST00000606057 376 ntBASIC2.3□□□□□ -2.04
RPUSD4Q96CM3 AC239868.4-201ENST00000608318 671 ntBASIC2.3□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms