Protein–RNA interactions for Protein: Q92547

TOPBP1, DNA topoisomerase 2-binding protein 1, humanhuman

Predictions only

Length 1,522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1Q92547 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC2.13□□□□□ -2.07
TOPBP1Q92547 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
TOPBP1Q92547 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC2.13□□□□□ -2.07
TOPBP1Q92547 HMGN2P38-201ENST00000423806 265 ntBASIC2.13□□□□□ -2.07
TOPBP1Q92547 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
TOPBP1Q92547 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC2.13□□□□□ -2.07
TOPBP1Q92547 AC090515.1-201ENST00000465295 476 ntBASIC2.13□□□□□ -2.07
TOPBP1Q92547 SEM1P1-201ENST00000506694 209 ntBASIC2.13□□□□□ -2.07
TOPBP1Q92547 AC010625.1-201ENST00000511296 403 ntBASIC2.13□□□□□ -2.07
TOPBP1Q92547 AC104057.1-201ENST00000515547 497 ntBASIC2.13□□□□□ -2.07
TOPBP1Q92547 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC2.13□□□□□ -2.07
TOPBP1Q92547 AP004607.1-201ENST00000524456 203 ntBASIC2.13□□□□□ -2.07
TOPBP1Q92547 AC092470.1-201ENST00000546187 132 ntBASIC2.13□□□□□ -2.07
TOPBP1Q92547 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC2.13□□□□□ -2.07
TOPBP1Q92547 AC007229.1-201ENST00000590455 412 ntBASIC2.13□□□□□ -2.07
TOPBP1Q92547 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC2.13□□□□□ -2.07
TOPBP1Q92547 AC011374.2-201ENST00000607135 526 ntBASIC2.13□□□□□ -2.07
TOPBP1Q92547 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC2.13□□□□□ -2.07
TOPBP1Q92547 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC2.13□□□□□ -2.07
TOPBP1Q92547 AL356118.1-201ENST00000635272 1078 ntBASIC2.13□□□□□ -2.07
TOPBP1Q92547 MKKS-204ENST00000639674 192 ntBASIC2.13□□□□□ -2.07
TOPBP1Q92547 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
TOPBP1Q92547 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.13□□□□□ -2.07
TOPBP1Q92547 AC138915.1-201ENST00000565427 1685 ntBASIC2.13□□□□□ -2.07
TOPBP1Q92547 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
TOPBP1Q92547 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
TOPBP1Q92547 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC2.12□□□□□ -2.07
TOPBP1Q92547 BX682237.1-201ENST00000415016 335 ntBASIC2.12□□□□□ -2.07
TOPBP1Q92547 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.12□□□□□ -2.07
TOPBP1Q92547 MTND2P21-201ENST00000436242 1042 ntBASIC2.12□□□□□ -2.07
TOPBP1Q92547 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC2.12□□□□□ -2.07
TOPBP1Q92547 MTCO1P31-201ENST00000506355 492 ntBASIC2.12□□□□□ -2.07
TOPBP1Q92547 AC105914.1-201ENST00000511798 226 ntBASIC2.12□□□□□ -2.07
TOPBP1Q92547 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC2.12□□□□□ -2.07
TOPBP1Q92547 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC2.12□□□□□ -2.07
TOPBP1Q92547 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC2.12□□□□□ -2.07
TOPBP1Q92547 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC2.12□□□□□ -2.07
TOPBP1Q92547 AL355812.1-201ENST00000603215 216 ntBASIC2.12□□□□□ -2.07
TOPBP1Q92547 AC073413.2-201ENST00000604332 360 ntBASIC2.12□□□□□ -2.07
TOPBP1Q92547 AC095031.1-201ENST00000623685 672 ntBASIC2.12□□□□□ -2.07
TOPBP1Q92547 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
TOPBP1Q92547 ZNF734P-201ENST00000419494 1534 ntBASIC2.12□□□□□ -2.07
TOPBP1Q92547 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC2.12□□□□□ -2.07
TOPBP1Q92547 RNU6-374P-201ENST00000364146 108 ntBASIC2.12□□□□□ -2.07
TOPBP1Q92547 Y_RNA.493-201ENST00000384422 102 ntBASIC2.12□□□□□ -2.07
TOPBP1Q92547 SNORA51.12-201ENST00000384448 134 ntBASIC2.12□□□□□ -2.07
TOPBP1Q92547 AC233728.2-201ENST00000425348 757 ntBASIC2.12□□□□□ -2.07
TOPBP1Q92547 AL078601.1-201ENST00000444542 271 ntBASIC2.12□□□□□ -2.07
TOPBP1Q92547 BMI1P1-201ENST00000445879 941 ntBASIC2.12□□□□□ -2.07
TOPBP1Q92547 AC015908.1-201ENST00000478739 476 ntBASIC2.12□□□□□ -2.07
TOPBP1Q92547 AC009901.1-201ENST00000506703 541 ntBASIC2.12□□□□□ -2.07
TOPBP1Q92547 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC2.12□□□□□ -2.07
TOPBP1Q92547 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC2.12□□□□□ -2.07
TOPBP1Q92547 AC027104.1-201ENST00000563702 681 ntBASIC2.12□□□□□ -2.07
TOPBP1Q92547 COX6CP3-201ENST00000580869 223 ntBASIC2.12□□□□□ -2.07
TOPBP1Q92547 AC245036.5-201ENST00000596330 847 ntBASIC2.12□□□□□ -2.07
TOPBP1Q92547 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC2.11□□□□□ -2.07
TOPBP1Q92547 RNA5SP258-201ENST00000362750 119 ntBASIC2.11□□□□□ -2.07
TOPBP1Q92547 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC2.11□□□□□ -2.07
TOPBP1Q92547 RNU6-1226P-201ENST00000384317 107 ntBASIC2.11□□□□□ -2.07
TOPBP1Q92547 RNU2-32P-201ENST00000411193 191 ntBASIC2.11□□□□□ -2.07
TOPBP1Q92547 AC092745.2-202ENST00000411880 369 ntBASIC2.11□□□□□ -2.07
TOPBP1Q92547 AL512504.1-201ENST00000415494 778 ntBASIC2.11□□□□□ -2.07
TOPBP1Q92547 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC2.11□□□□□ -2.07
TOPBP1Q92547 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC2.11□□□□□ -2.07
TOPBP1Q92547 AC068135.1-201ENST00000446164 246 ntBASIC2.11□□□□□ -2.07
TOPBP1Q92547 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC2.11□□□□□ -2.07
TOPBP1Q92547 AC092474.3-201ENST00000603022 568 ntBASIC2.11□□□□□ -2.07
TOPBP1Q92547 DPRXP5-201ENST00000604662 539 ntBASIC2.11□□□□□ -2.07
TOPBP1Q92547 AC106791.2-201ENST00000604680 391 ntBASIC2.11□□□□□ -2.07
TOPBP1Q92547 HSPE1P14-201ENST00000605812 302 ntBASIC2.11□□□□□ -2.07
TOPBP1Q92547 AC018755.4-201ENST00000619715 454 ntBASIC2.11□□□□□ -2.07
TOPBP1Q92547 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC2.11□□□□□ -2.07
TOPBP1Q92547 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
TOPBP1Q92547 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
TOPBP1Q92547 RNU6-799P-201ENST00000363567 107 ntBASIC2.1□□□□□ -2.07
TOPBP1Q92547 RNA5SP363-201ENST00000365072 115 ntBASIC2.1□□□□□ -2.07
TOPBP1Q92547 RNU6-272P-201ENST00000411028 104 ntBASIC2.1□□□□□ -2.07
TOPBP1Q92547 MTCO3P12-201ENST00000416718 547 ntBASIC2.1□□□□□ -2.07
TOPBP1Q92547 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC2.1□□□□□ -2.07
TOPBP1Q92547 TRIM60P13-201ENST00000432350 1283 ntBASIC2.1□□□□□ -2.07
TOPBP1Q92547 MTCO1P48-201ENST00000448024 1096 ntBASIC2.1□□□□□ -2.07
TOPBP1Q92547 AC005297.2-201ENST00000450430 606 ntBASIC2.1□□□□□ -2.07
TOPBP1Q92547 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC2.1□□□□□ -2.07
TOPBP1Q92547 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC2.1□□□□□ -2.07
TOPBP1Q92547 RN7SKP265-201ENST00000516448 223 ntBASIC2.1□□□□□ -2.07
TOPBP1Q92547 AC019176.1-201ENST00000518519 225 ntBASIC2.1□□□□□ -2.07
TOPBP1Q92547 AC135178.6-201ENST00000605314 398 ntBASIC2.1□□□□□ -2.07
TOPBP1Q92547 AC140725.3-201ENST00000616193 880 ntBASIC2.1□□□□□ -2.07
TOPBP1Q92547 AC007275.1-201ENST00000621243 671 ntBASIC2.1□□□□□ -2.07
TOPBP1Q92547 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC2.1□□□□□ -2.07
TOPBP1Q92547 AC024595.1-201ENST00000623088 387 ntBASIC2.1□□□□□ -2.07
TOPBP1Q92547 AL109659.3-201ENST00000624985 950 ntBASIC2.1□□□□□ -2.07
TOPBP1Q92547 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC2.1□□□□□ -2.07
TOPBP1Q92547 AP000648.3-201ENST00000623539 4507 ntBASIC2.1□□□□□ -2.07
TOPBP1Q92547 AC090740.1-201ENST00000623193 2262 ntBASIC2.09□□□□□ -2.07
TOPBP1Q92547 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.09□□□□□ -2.07
TOPBP1Q92547 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
TOPBP1Q92547 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC2.09□□□□□ -2.07
TOPBP1Q92547 RNU6-1180P-201ENST00000364935 107 ntBASIC2.09□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms