Protein–RNA interactions for Protein: Q8TE12

LMX1A, LIM homeobox transcription factor 1-alpha, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1AQ8TE12 ELOCP26-201ENST00000436067 329 ntBASIC1.93□□□□□ -2.1
LMX1AQ8TE12 GTF2IP7-202ENST00000436677 309 ntBASIC1.93□□□□□ -2.1
LMX1AQ8TE12 ARPC3P1-201ENST00000437218 533 ntBASIC1.93□□□□□ -2.1
LMX1AQ8TE12 PTGES3P1-201ENST00000439531 483 ntBASIC1.93□□□□□ -2.1
LMX1AQ8TE12 AL714022.1-201ENST00000439897 151 ntBASIC1.93□□□□□ -2.1
LMX1AQ8TE12 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC1.93□□□□□ -2.1
LMX1AQ8TE12 USP9YP8-201ENST00000441913 500 ntBASIC1.93□□□□□ -2.1
LMX1AQ8TE12 AL121871.1-201ENST00000443413 436 ntBASIC1.93□□□□□ -2.1
LMX1AQ8TE12 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC1.93□□□□□ -2.1
LMX1AQ8TE12 PNPLA4P1-201ENST00000458328 305 ntBASIC1.93□□□□□ -2.1
LMX1AQ8TE12 AC092757.1-201ENST00000467293 467 ntBASIC1.93□□□□□ -2.1
LMX1AQ8TE12 AC116337.2-201ENST00000477662 156 ntBASIC1.93□□□□□ -2.1
LMX1AQ8TE12 AC104435.1-201ENST00000483483 166 ntBASIC1.93□□□□□ -2.1
LMX1AQ8TE12 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC1.93□□□□□ -2.1
LMX1AQ8TE12 AC010460.2-201ENST00000509054 677 ntBASIC1.93□□□□□ -2.1
LMX1AQ8TE12 AC113155.1-201ENST00000511141 769 ntBASIC1.93□□□□□ -2.1
LMX1AQ8TE12 RN7SKP219-201ENST00000516825 296 ntBASIC1.93□□□□□ -2.1
LMX1AQ8TE12 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC1.93□□□□□ -2.1
LMX1AQ8TE12 AC104417.1-201ENST00000523974 751 ntBASIC1.93□□□□□ -2.1
LMX1AQ8TE12 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC1.93□□□□□ -2.1
LMX1AQ8TE12 AC087897.1-201ENST00000550134 156 ntBASIC1.93□□□□□ -2.1
LMX1AQ8TE12 MIR5002-201ENST00000584713 97 ntBASIC1.93□□□□□ -2.1
LMX1AQ8TE12 AC105224.1-201ENST00000587055 421 ntBASIC1.93□□□□□ -2.1
LMX1AQ8TE12 SNRPGP19-201ENST00000603826 189 ntBASIC1.93□□□□□ -2.1
LMX1AQ8TE12 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC1.93□□□□□ -2.1
LMX1AQ8TE12 YWHAEP7-203ENST00000622054 312 ntBASIC1.93□□□□□ -2.1
LMX1AQ8TE12 AC004009.2-201ENST00000623016 728 ntBASIC1.93□□□□□ -2.1
LMX1AQ8TE12 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC1.93□□□□□ -2.1
LMX1AQ8TE12 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
LMX1AQ8TE12 OR4G11P-202ENST00000642116 1414 ntBASIC1.92□□□□□ -2.1
LMX1AQ8TE12 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC1.92□□□□□ -2.1
LMX1AQ8TE12 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
LMX1AQ8TE12 SNRPEP3-201ENST00000338402 276 ntBASIC1.92□□□□□ -2.1
LMX1AQ8TE12 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC1.92□□□□□ -2.1
LMX1AQ8TE12 RNU6ATAC16P-201ENST00000408591 138 ntBASIC1.92□□□□□ -2.1
LMX1AQ8TE12 USP9YP21-201ENST00000420603 432 ntBASIC1.92□□□□□ -2.1
LMX1AQ8TE12 CYCSP49-201ENST00000420810 319 ntBASIC1.92□□□□□ -2.1
LMX1AQ8TE12 ZNF736P7Y-201ENST00000425158 820 ntBASIC1.92□□□□□ -2.1
LMX1AQ8TE12 MTND2P5-201ENST00000432656 1006 ntBASIC1.92□□□□□ -2.1
LMX1AQ8TE12 AC093155.1-201ENST00000440164 826 ntBASIC1.92□□□□□ -2.1
LMX1AQ8TE12 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC1.92□□□□□ -2.1
LMX1AQ8TE12 MTCYBP42-201ENST00000444653 1130 ntBASIC1.92□□□□□ -2.1
LMX1AQ8TE12 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC1.92□□□□□ -2.1
LMX1AQ8TE12 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC1.92□□□□□ -2.1
LMX1AQ8TE12 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC1.92□□□□□ -2.1
LMX1AQ8TE12 RNU7-23P-201ENST00000459465 62 ntBASIC1.92□□□□□ -2.1
LMX1AQ8TE12 RPL31P41-201ENST00000477967 372 ntBASIC1.92□□□□□ -2.1
LMX1AQ8TE12 AC023424.2-201ENST00000493479 777 ntBASIC1.92□□□□□ -2.1
LMX1AQ8TE12 RPL23AP63-201ENST00000498752 471 ntBASIC1.92□□□□□ -2.1
LMX1AQ8TE12 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC1.92□□□□□ -2.1
LMX1AQ8TE12 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC1.92□□□□□ -2.1
LMX1AQ8TE12 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC1.92□□□□□ -2.1
LMX1AQ8TE12 RNA5SP182-201ENST00000516064 82 ntBASIC1.92□□□□□ -2.1
LMX1AQ8TE12 RNA5SP82-201ENST00000516707 92 ntBASIC1.92□□□□□ -2.1
LMX1AQ8TE12 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC1.92□□□□□ -2.1
LMX1AQ8TE12 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC1.92□□□□□ -2.1
LMX1AQ8TE12 COX6CP5-201ENST00000527162 228 ntBASIC1.92□□□□□ -2.1
LMX1AQ8TE12 AK6P1-201ENST00000540219 478 ntBASIC1.92□□□□□ -2.1
LMX1AQ8TE12 CR383656.7-201ENST00000548164 174 ntBASIC1.92□□□□□ -2.1
LMX1AQ8TE12 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC1.92□□□□□ -2.1
LMX1AQ8TE12 MIR5089-201ENST00000580047 84 ntBASIC1.92□□□□□ -2.1
LMX1AQ8TE12 AC015688.2-201ENST00000584523 262 ntBASIC1.92□□□□□ -2.1
LMX1AQ8TE12 MTATP6P2-201ENST00000603319 678 ntBASIC1.92□□□□□ -2.1
LMX1AQ8TE12 AC099785.1-201ENST00000605697 437 ntBASIC1.92□□□□□ -2.1
LMX1AQ8TE12 MIR6895-201ENST00000613497 78 ntBASIC1.92□□□□□ -2.1
LMX1AQ8TE12 AC109454.4-201ENST00000623411 649 ntBASIC1.92□□□□□ -2.1
LMX1AQ8TE12 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC1.92□□□□□ -2.1
LMX1AQ8TE12 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC1.92□□□□□ -2.1
LMX1AQ8TE12 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
LMX1AQ8TE12 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
LMX1AQ8TE12 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.92□□□□□ -2.1
LMX1AQ8TE12 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
LMX1AQ8TE12 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC1.91□□□□□ -2.1
LMX1AQ8TE12 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC1.91□□□□□ -2.1
LMX1AQ8TE12 AC012321.1-201ENST00000561622 1588 ntBASIC1.91□□□□□ -2.1
LMX1AQ8TE12 AL139276.1-201ENST00000311910 1001 ntBASIC1.91□□□□□ -2.1
LMX1AQ8TE12 SNORA68.1-201ENST00000364537 132 ntBASIC1.91□□□□□ -2.1
LMX1AQ8TE12 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
LMX1AQ8TE12 AL356131.1-201ENST00000405826 414 ntBASIC1.91□□□□□ -2.1
LMX1AQ8TE12 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC1.91□□□□□ -2.1
LMX1AQ8TE12 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC1.91□□□□□ -2.1
LMX1AQ8TE12 ACTR3BP6-201ENST00000422332 1241 ntBASIC1.91□□□□□ -2.1
LMX1AQ8TE12 AC009414.1-201ENST00000427200 443 ntBASIC1.91□□□□□ -2.1
LMX1AQ8TE12 AL590233.1-201ENST00000430017 456 ntBASIC1.91□□□□□ -2.1
LMX1AQ8TE12 SEPT7P5-201ENST00000434048 306 ntBASIC1.91□□□□□ -2.1
LMX1AQ8TE12 SDR42E1P3-201ENST00000438345 502 ntBASIC1.91□□□□□ -2.1
LMX1AQ8TE12 RAC1P7-201ENST00000445367 377 ntBASIC1.91□□□□□ -2.1
LMX1AQ8TE12 AC079776.3-201ENST00000450665 370 ntBASIC1.91□□□□□ -2.1
LMX1AQ8TE12 AC026410.2-201ENST00000460281 156 ntBASIC1.91□□□□□ -2.1
LMX1AQ8TE12 AL049714.1-201ENST00000466686 347 ntBASIC1.91□□□□□ -2.1
LMX1AQ8TE12 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC1.91□□□□□ -2.1
LMX1AQ8TE12 GZMAP1-201ENST00000503054 631 ntBASIC1.91□□□□□ -2.1
LMX1AQ8TE12 FAM92A1P2-202ENST00000504766 877 ntBASIC1.91□□□□□ -2.1
LMX1AQ8TE12 AC114322.1-201ENST00000506771 926 ntBASIC1.91□□□□□ -2.1
LMX1AQ8TE12 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC1.91□□□□□ -2.1
LMX1AQ8TE12 RNU6-798P-201ENST00000516912 103 ntBASIC1.91□□□□□ -2.1
LMX1AQ8TE12 DEFB130C-202ENST00000530001 230 ntBASIC1.91□□□□□ -2.1
LMX1AQ8TE12 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
LMX1AQ8TE12 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
LMX1AQ8TE12 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms