Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC2.16□□□□□ -2.06
CLHC1Q8NHS4 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC2.16□□□□□ -2.06
CLHC1Q8NHS4 AP001429.1-201ENST00000602568 530 ntBASIC2.16□□□□□ -2.06
CLHC1Q8NHS4 AC025165.5-201ENST00000602802 578 ntBASIC2.16□□□□□ -2.06
CLHC1Q8NHS4 AC005776.1-201ENST00000603164 290 ntBASIC2.16□□□□□ -2.06
CLHC1Q8NHS4 AC013562.2-201ENST00000611632 603 ntBASIC2.16□□□□□ -2.06
CLHC1Q8NHS4 AC109454.4-201ENST00000623411 649 ntBASIC2.16□□□□□ -2.06
CLHC1Q8NHS4 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC2.16□□□□□ -2.06
CLHC1Q8NHS4 MIR1322-201ENST00000638013 71 ntBASIC2.16□□□□□ -2.06
CLHC1Q8NHS4 AL136360.1-201ENST00000503377 1900 ntBASIC2.16□□□□□ -2.06
CLHC1Q8NHS4 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
CLHC1Q8NHS4 Z99496.1-201ENST00000469424 1477 ntBASIC2.15□□□□□ -2.06
CLHC1Q8NHS4 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.15□□□□□ -2.06
CLHC1Q8NHS4 RNU6-301P-201ENST00000384277 107 ntBASIC2.15□□□□□ -2.07
CLHC1Q8NHS4 AL445529.1-201ENST00000398713 389 ntBASIC2.15□□□□□ -2.07
CLHC1Q8NHS4 CIR1P3-201ENST00000405137 479 ntBASIC2.15□□□□□ -2.07
CLHC1Q8NHS4 RNA5SP80-201ENST00000410475 111 ntBASIC2.15□□□□□ -2.07
CLHC1Q8NHS4 AC008850.1-201ENST00000427546 362 ntBASIC2.15□□□□□ -2.07
CLHC1Q8NHS4 MICF-203ENST00000432679 129 ntBASIC2.15□□□□□ -2.07
CLHC1Q8NHS4 AC093155.1-201ENST00000440164 826 ntBASIC2.15□□□□□ -2.07
CLHC1Q8NHS4 AC124916.1-201ENST00000444020 547 ntBASIC2.15□□□□□ -2.07
CLHC1Q8NHS4 RPL31P50-201ENST00000471002 296 ntBASIC2.15□□□□□ -2.07
CLHC1Q8NHS4 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC2.15□□□□□ -2.07
CLHC1Q8NHS4 AC098591.2-201ENST00000510152 315 ntBASIC2.15□□□□□ -2.07
CLHC1Q8NHS4 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.15□□□□□ -2.07
CLHC1Q8NHS4 AP003049.1-201ENST00000529418 457 ntBASIC2.15□□□□□ -2.07
CLHC1Q8NHS4 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC2.15□□□□□ -2.07
CLHC1Q8NHS4 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC2.15□□□□□ -2.07
CLHC1Q8NHS4 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC2.15□□□□□ -2.07
CLHC1Q8NHS4 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC2.15□□□□□ -2.07
CLHC1Q8NHS4 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC2.15□□□□□ -2.07
CLHC1Q8NHS4 MIR3162-201ENST00000581818 82 ntBASIC2.15□□□□□ -2.07
CLHC1Q8NHS4 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC2.15□□□□□ -2.07
CLHC1Q8NHS4 DNAJC19P3-201ENST00000594491 331 ntBASIC2.15□□□□□ -2.07
CLHC1Q8NHS4 VN1R87P-201ENST00000596706 487 ntBASIC2.15□□□□□ -2.07
CLHC1Q8NHS4 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.15□□□□□ -2.07
CLHC1Q8NHS4 AL021997.1-201ENST00000605757 193 ntBASIC2.15□□□□□ -2.07
CLHC1Q8NHS4 AC005858.4-201ENST00000623191 700 ntBASIC2.15□□□□□ -2.07
CLHC1Q8NHS4 AC120349.2-201ENST00000625002 298 ntBASIC2.15□□□□□ -2.07
CLHC1Q8NHS4 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.15□□□□□ -2.07
CLHC1Q8NHS4 AL359851.1-201ENST00000569460 4997 ntBASIC2.15□□□□□ -2.07
CLHC1Q8NHS4 AC005539.1-201ENST00000443768 1479 ntBASIC2.14□□□□□ -2.07
CLHC1Q8NHS4 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
CLHC1Q8NHS4 RNA5SP289-201ENST00000362332 137 ntBASIC2.14□□□□□ -2.07
CLHC1Q8NHS4 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC2.14□□□□□ -2.07
CLHC1Q8NHS4 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC2.14□□□□□ -2.07
CLHC1Q8NHS4 SNRPEP2-201ENST00000397592 279 ntBASIC2.14□□□□□ -2.07
CLHC1Q8NHS4 AL591416.1-201ENST00000404015 867 ntBASIC2.14□□□□□ -2.07
CLHC1Q8NHS4 RNA5SP270-201ENST00000411361 118 ntBASIC2.14□□□□□ -2.07
CLHC1Q8NHS4 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC2.14□□□□□ -2.07
CLHC1Q8NHS4 SEPT7P5-201ENST00000434048 306 ntBASIC2.14□□□□□ -2.07
CLHC1Q8NHS4 AC092427.1-201ENST00000439177 601 ntBASIC2.14□□□□□ -2.07
CLHC1Q8NHS4 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.14□□□□□ -2.07
CLHC1Q8NHS4 RGS5-217ENST00000451759 835 ntTSL 3 BASIC2.14□□□□□ -2.07
CLHC1Q8NHS4 OR4G11P-201ENST00000492842 939 ntBASIC2.14□□□□□ -2.07
CLHC1Q8NHS4 TMEM251P1-201ENST00000503717 318 ntBASIC2.14□□□□□ -2.07
CLHC1Q8NHS4 RNA5SP24-201ENST00000516478 95 ntBASIC2.14□□□□□ -2.07
CLHC1Q8NHS4 SCARNA3-201ENST00000517097 143 ntBASIC2.14□□□□□ -2.07
CLHC1Q8NHS4 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC2.14□□□□□ -2.07
CLHC1Q8NHS4 MTCO3P15-201ENST00000526563 574 ntBASIC2.14□□□□□ -2.07
CLHC1Q8NHS4 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC2.14□□□□□ -2.07
CLHC1Q8NHS4 MIR5007-201ENST00000583098 95 ntBASIC2.14□□□□□ -2.07
CLHC1Q8NHS4 ABBA01006766.1-201ENST00000584728 294 ntBASIC2.14□□□□□ -2.07
CLHC1Q8NHS4 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC2.14□□□□□ -2.07
CLHC1Q8NHS4 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC2.14□□□□□ -2.07
CLHC1Q8NHS4 AC026790.2-201ENST00000606282 430 ntBASIC2.14□□□□□ -2.07
CLHC1Q8NHS4 AL583856.2-201ENST00000606298 543 ntBASIC2.14□□□□□ -2.07
CLHC1Q8NHS4 AC005332.6-201ENST00000613178 446 ntBASIC2.14□□□□□ -2.07
CLHC1Q8NHS4 AL512506.1-201ENST00000613918 449 ntBASIC2.14□□□□□ -2.07
CLHC1Q8NHS4 AP001486.3-201ENST00000615334 372 ntBASIC2.14□□□□□ -2.07
CLHC1Q8NHS4 AC009159.1-201ENST00000618386 642 ntBASIC2.14□□□□□ -2.07
CLHC1Q8NHS4 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC2.14□□□□□ -2.07
CLHC1Q8NHS4 AL159972.1-201ENST00000625150 448 ntBASIC2.14□□□□□ -2.07
CLHC1Q8NHS4 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC2.14□□□□□ -2.07
CLHC1Q8NHS4 MIR4275-201ENST00000636486 87 ntBASIC2.14□□□□□ -2.07
CLHC1Q8NHS4 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.14□□□□□ -2.07
CLHC1Q8NHS4 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.14□□□□□ -2.07
CLHC1Q8NHS4 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
CLHC1Q8NHS4 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
CLHC1Q8NHS4 MTCO1P9-201ENST00000505577 1534 ntBASIC2.13□□□□□ -2.07
CLHC1Q8NHS4 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC2.13□□□□□ -2.07
CLHC1Q8NHS4 RNU6-140P-201ENST00000384566 108 ntBASIC2.13□□□□□ -2.07
CLHC1Q8NHS4 SNORA46.1-201ENST00000391069 153 ntBASIC2.13□□□□□ -2.07
CLHC1Q8NHS4 MIR888-201ENST00000401186 77 ntBASIC2.13□□□□□ -2.07
CLHC1Q8NHS4 AL079342.2-201ENST00000403367 482 ntBASIC2.13□□□□□ -2.07
CLHC1Q8NHS4 AC107081.1-201ENST00000414975 361 ntBASIC2.13□□□□□ -2.07
CLHC1Q8NHS4 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC2.13□□□□□ -2.07
CLHC1Q8NHS4 AL109913.1-201ENST00000421173 514 ntBASIC2.13□□□□□ -2.07
CLHC1Q8NHS4 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC2.13□□□□□ -2.07
CLHC1Q8NHS4 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.13□□□□□ -2.07
CLHC1Q8NHS4 MTCYBP45-201ENST00000435243 565 ntBASIC2.13□□□□□ -2.07
CLHC1Q8NHS4 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.13□□□□□ -2.07
CLHC1Q8NHS4 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC2.13□□□□□ -2.07
CLHC1Q8NHS4 MTCO3P11-201ENST00000455103 774 ntBASIC2.13□□□□□ -2.07
CLHC1Q8NHS4 AL121769.1-201ENST00000469473 401 ntBASIC2.13□□□□□ -2.07
CLHC1Q8NHS4 AC022493.1-201ENST00000492984 337 ntBASIC2.13□□□□□ -2.07
CLHC1Q8NHS4 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC2.13□□□□□ -2.07
CLHC1Q8NHS4 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
CLHC1Q8NHS4 GTF2IP9-201ENST00000502460 301 ntBASIC2.13□□□□□ -2.07
CLHC1Q8NHS4 GZMAP1-201ENST00000503054 631 ntBASIC2.13□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms