Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 AL136981.2-201ENST00000617319 734 ntBASIC2.59□□□□□ -1.99
CCDC50Q8IVM0 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC2.59□□□□□ -1.99
CCDC50Q8IVM0 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
CCDC50Q8IVM0 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.59□□□□□ -2
CCDC50Q8IVM0 SDAD1P2-201ENST00000441308 2028 ntBASIC2.59□□□□□ -2
CCDC50Q8IVM0 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
CCDC50Q8IVM0 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.58□□□□□ -2
CCDC50Q8IVM0 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.58□□□□□ -2
CCDC50Q8IVM0 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC2.58□□□□□ -2
CCDC50Q8IVM0 MIR34A-201ENST00000385130 110 ntBASIC2.58□□□□□ -2
CCDC50Q8IVM0 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.58□□□□□ -2
CCDC50Q8IVM0 MTCO2P8-201ENST00000412213 658 ntBASIC2.58□□□□□ -2
CCDC50Q8IVM0 UBE2FP1-201ENST00000416536 447 ntBASIC2.58□□□□□ -2
CCDC50Q8IVM0 ELOCP9-201ENST00000418624 239 ntBASIC2.58□□□□□ -2
CCDC50Q8IVM0 MORF4L1P6-201ENST00000418771 268 ntBASIC2.58□□□□□ -2
CCDC50Q8IVM0 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC2.58□□□□□ -2
CCDC50Q8IVM0 TXNL1P1-201ENST00000429528 554 ntBASIC2.58□□□□□ -2
CCDC50Q8IVM0 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.58□□□□□ -2
CCDC50Q8IVM0 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC2.58□□□□□ -2
CCDC50Q8IVM0 AL031659.1-201ENST00000447075 539 ntBASIC2.58□□□□□ -2
CCDC50Q8IVM0 RPS20P20-201ENST00000460498 340 ntBASIC2.58□□□□□ -2
CCDC50Q8IVM0 RPL23AP45-201ENST00000476406 468 ntBASIC2.58□□□□□ -2
CCDC50Q8IVM0 RPL23AP70-201ENST00000483361 460 ntBASIC2.58□□□□□ -2
CCDC50Q8IVM0 RPS3AP14-201ENST00000483907 780 ntBASIC2.58□□□□□ -2
CCDC50Q8IVM0 AC091951.3-201ENST00000504093 246 ntBASIC2.58□□□□□ -2
CCDC50Q8IVM0 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC2.58□□□□□ -2
CCDC50Q8IVM0 AC023538.1-201ENST00000534576 736 ntBASIC2.58□□□□□ -2
CCDC50Q8IVM0 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC2.58□□□□□ -2
CCDC50Q8IVM0 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.58□□□□□ -2
CCDC50Q8IVM0 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC2.58□□□□□ -2
CCDC50Q8IVM0 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC2.58□□□□□ -2
CCDC50Q8IVM0 RPL23AP84-201ENST00000571193 464 ntBASIC2.58□□□□□ -2
CCDC50Q8IVM0 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC2.58□□□□□ -2
CCDC50Q8IVM0 AC022662.1-201ENST00000580252 331 ntBASIC2.58□□□□□ -2
CCDC50Q8IVM0 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC2.58□□□□□ -2
CCDC50Q8IVM0 AL596327.1-201ENST00000603629 213 ntBASIC2.58□□□□□ -2
CCDC50Q8IVM0 AL357094.1-201ENST00000603845 844 ntBASIC2.58□□□□□ -2
CCDC50Q8IVM0 AL136370.1-201ENST00000608166 691 ntBASIC2.58□□□□□ -2
CCDC50Q8IVM0 MIR7106-201ENST00000612419 65 ntBASIC2.58□□□□□ -2
CCDC50Q8IVM0 AP000484.1-201ENST00000620067 1252 ntBASIC2.58□□□□□ -2
CCDC50Q8IVM0 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC2.58□□□□□ -2
CCDC50Q8IVM0 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC2.58□□□□□ -2
CCDC50Q8IVM0 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
CCDC50Q8IVM0 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.58□□□□□ -2
CCDC50Q8IVM0 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC2.57□□□□□ -2
CCDC50Q8IVM0 RNA5SP456-201ENST00000364002 114 ntBASIC2.57□□□□□ -2
CCDC50Q8IVM0 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC2.57□□□□□ -2
CCDC50Q8IVM0 MIR196B-201ENST00000384852 84 ntBASIC2.57□□□□□ -2
CCDC50Q8IVM0 RNU6-754P-201ENST00000391166 107 ntBASIC2.57□□□□□ -2
CCDC50Q8IVM0 RNU6-757P-201ENST00000410334 100 ntBASIC2.57□□□□□ -2
CCDC50Q8IVM0 PIGPP2-201ENST00000411569 458 ntBASIC2.57□□□□□ -2
CCDC50Q8IVM0 TPMTP3-201ENST00000411928 735 ntBASIC2.57□□□□□ -2
CCDC50Q8IVM0 AC092047.1-201ENST00000424997 240 ntBASIC2.57□□□□□ -2
CCDC50Q8IVM0 AL445669.1-201ENST00000426743 755 ntBASIC2.57□□□□□ -2
CCDC50Q8IVM0 MTCYBP3-201ENST00000445588 1137 ntBASIC2.57□□□□□ -2
CCDC50Q8IVM0 TPT1P14-201ENST00000448018 505 ntBASIC2.57□□□□□ -2
CCDC50Q8IVM0 PAXBP1P1-201ENST00000449315 447 ntBASIC2.57□□□□□ -2
CCDC50Q8IVM0 USP9YP10-201ENST00000454868 628 ntBASIC2.57□□□□□ -2
CCDC50Q8IVM0 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC2.57□□□□□ -2
CCDC50Q8IVM0 AC096576.1-201ENST00000489014 359 ntBASIC2.57□□□□□ -2
CCDC50Q8IVM0 AC090096.1-201ENST00000489168 390 ntBASIC2.57□□□□□ -2
CCDC50Q8IVM0 RPS15AP36-201ENST00000492022 382 ntBASIC2.57□□□□□ -2
CCDC50Q8IVM0 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC2.57□□□□□ -2
CCDC50Q8IVM0 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC2.57□□□□□ -2
CCDC50Q8IVM0 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC2.57□□□□□ -2
CCDC50Q8IVM0 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC2.57□□□□□ -2
CCDC50Q8IVM0 EIF4BP1-201ENST00000554881 351 ntBASIC2.57□□□□□ -2
CCDC50Q8IVM0 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
CCDC50Q8IVM0 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC2.57□□□□□ -2
CCDC50Q8IVM0 AC010546.1-201ENST00000569391 485 ntBASIC2.57□□□□□ -2
CCDC50Q8IVM0 ISCA1P3-201ENST00000577104 373 ntBASIC2.57□□□□□ -2
CCDC50Q8IVM0 MIR4319-201ENST00000577285 85 ntBASIC2.57□□□□□ -2
CCDC50Q8IVM0 AC103810.1-201ENST00000579873 453 ntBASIC2.57□□□□□ -2
CCDC50Q8IVM0 LARP7P3-201ENST00000579888 337 ntBASIC2.57□□□□□ -2
CCDC50Q8IVM0 AC060771.1-201ENST00000582031 164 ntBASIC2.57□□□□□ -2
CCDC50Q8IVM0 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.57□□□□□ -2
CCDC50Q8IVM0 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.57□□□□□ -2
CCDC50Q8IVM0 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC2.57□□□□□ -2
CCDC50Q8IVM0 OR2AS2P-201ENST00000606902 342 ntBASIC2.57□□□□□ -2
CCDC50Q8IVM0 TUG1_2.1-201ENST00000614234 87 ntBASIC2.57□□□□□ -2
CCDC50Q8IVM0 AC010133.1-201ENST00000615809 842 ntBASIC2.57□□□□□ -2
CCDC50Q8IVM0 AC013470.4-201ENST00000619978 986 ntBASIC2.57□□□□□ -2
CCDC50Q8IVM0 AC009268.2-201ENST00000621925 457 ntBASIC2.57□□□□□ -2
CCDC50Q8IVM0 DDX10P1-201ENST00000448545 1933 ntBASIC2.56□□□□□ -2
CCDC50Q8IVM0 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
CCDC50Q8IVM0 MIRLET7G-201ENST00000362280 84 ntBASIC2.56□□□□□ -2
CCDC50Q8IVM0 SNORA4.1-201ENST00000364263 144 ntBASIC2.56□□□□□ -2
CCDC50Q8IVM0 RNU1-51P-201ENST00000365345 176 ntBASIC2.56□□□□□ -2
CCDC50Q8IVM0 U3.20-201ENST00000390909 217 ntBASIC2.56□□□□□ -2
CCDC50Q8IVM0 MIR320C1-201ENST00000408566 88 ntBASIC2.56□□□□□ -2
CCDC50Q8IVM0 Z92545.1-201ENST00000411782 234 ntBASIC2.56□□□□□ -2
CCDC50Q8IVM0 AC096664.2-201ENST00000411843 406 ntBASIC2.56□□□□□ -2
CCDC50Q8IVM0 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC2.56□□□□□ -2
CCDC50Q8IVM0 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC2.56□□□□□ -2
CCDC50Q8IVM0 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC2.56□□□□□ -2
CCDC50Q8IVM0 AC092427.1-202ENST00000430569 476 ntBASIC2.56□□□□□ -2
CCDC50Q8IVM0 RPL23AP83-201ENST00000434984 473 ntBASIC2.56□□□□□ -2
CCDC50Q8IVM0 RSU1P2-202ENST00000437884 485 ntBASIC2.56□□□□□ -2
CCDC50Q8IVM0 AL049734.2-201ENST00000441066 616 ntBASIC2.56□□□□□ -2
CCDC50Q8IVM0 AL831737.1-201ENST00000441288 271 ntBASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 113.5 ms