Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 OR9R1P-201ENST00000412200 877 ntBASIC4.29□□□□□ -1.72
UBE3BQ7Z3V4 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC4.29□□□□□ -1.72
UBE3BQ7Z3V4 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC4.29□□□□□ -1.72
UBE3BQ7Z3V4 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC4.29□□□□□ -1.72
UBE3BQ7Z3V4 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC4.29□□□□□ -1.72
UBE3BQ7Z3V4 PSMA2P3-201ENST00000429685 675 ntBASIC4.29□□□□□ -1.72
UBE3BQ7Z3V4 DDX3P2-201ENST00000446138 111 ntBASIC4.29□□□□□ -1.72
UBE3BQ7Z3V4 AC140076.1-201ENST00000449897 361 ntBASIC4.29□□□□□ -1.72
UBE3BQ7Z3V4 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC4.29□□□□□ -1.72
UBE3BQ7Z3V4 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC4.29□□□□□ -1.72
UBE3BQ7Z3V4 PMCHL2-203ENST00000457791 237 ntBASIC4.29□□□□□ -1.72
UBE3BQ7Z3V4 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC4.29□□□□□ -1.72
UBE3BQ7Z3V4 RNU7-59P-201ENST00000459101 61 ntBASIC4.29□□□□□ -1.72
UBE3BQ7Z3V4 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC4.29□□□□□ -1.72
UBE3BQ7Z3V4 AC114786.4-201ENST00000508771 728 ntBASIC4.29□□□□□ -1.72
UBE3BQ7Z3V4 PCBP2P3-201ENST00000509726 843 ntBASIC4.29□□□□□ -1.72
UBE3BQ7Z3V4 FCF1P8-201ENST00000510322 597 ntBASIC4.29□□□□□ -1.72
UBE3BQ7Z3V4 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.29□□□□□ -1.72
UBE3BQ7Z3V4 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC4.29□□□□□ -1.72
UBE3BQ7Z3V4 OR4R1P-201ENST00000529879 463 ntBASIC4.29□□□□□ -1.72
UBE3BQ7Z3V4 OR5BN1P-201ENST00000532955 829 ntBASIC4.29□□□□□ -1.72
UBE3BQ7Z3V4 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC4.29□□□□□ -1.72
UBE3BQ7Z3V4 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC4.29□□□□□ -1.72
UBE3BQ7Z3V4 MIR5195-201ENST00000583555 115 ntBASIC4.29□□□□□ -1.72
UBE3BQ7Z3V4 AC005261.5-201ENST00000596280 355 ntBASIC4.29□□□□□ -1.72
UBE3BQ7Z3V4 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC4.29□□□□□ -1.72
UBE3BQ7Z3V4 DISC2.1-201ENST00000612827 205 ntBASIC4.29□□□□□ -1.72
UBE3BQ7Z3V4 AC091953.5-201ENST00000622919 233 ntBASIC4.29□□□□□ -1.72
UBE3BQ7Z3V4 MIR3651-201ENST00000630427 90 ntBASIC4.29□□□□□ -1.72
UBE3BQ7Z3V4 OSBPL9P4-201ENST00000371707 1800 ntBASIC4.29□□□□□ -1.72
UBE3BQ7Z3V4 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC4.29□□□□□ -1.72
UBE3BQ7Z3V4 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
UBE3BQ7Z3V4 AL356274.2-201ENST00000624379 3752 ntBASIC4.29□□□□□ -1.72
UBE3BQ7Z3V4 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
UBE3BQ7Z3V4 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.28□□□□□ -1.72
UBE3BQ7Z3V4 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
UBE3BQ7Z3V4 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
UBE3BQ7Z3V4 MFSD8-233ENST00000641482 4860 ntBASIC4.28□□□□□ -1.72
UBE3BQ7Z3V4 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
UBE3BQ7Z3V4 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
UBE3BQ7Z3V4 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
UBE3BQ7Z3V4 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
UBE3BQ7Z3V4 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
UBE3BQ7Z3V4 Y_RNA.72-201ENST00000362894 103 ntBASIC4.28□□□□□ -1.72
UBE3BQ7Z3V4 RNU6-511P-201ENST00000363496 107 ntBASIC4.28□□□□□ -1.72
UBE3BQ7Z3V4 U3.11-201ENST00000364476 212 ntBASIC4.28□□□□□ -1.72
UBE3BQ7Z3V4 RNA5SP235-201ENST00000365411 114 ntBASIC4.28□□□□□ -1.72
UBE3BQ7Z3V4 RNU6-821P-201ENST00000390995 107 ntBASIC4.28□□□□□ -1.72
UBE3BQ7Z3V4 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
UBE3BQ7Z3V4 AL354719.1-201ENST00000406535 843 ntBASIC4.28□□□□□ -1.72
UBE3BQ7Z3V4 MIR1250-201ENST00000408098 113 ntBASIC4.28□□□□□ -1.72
UBE3BQ7Z3V4 RNU2-9P-201ENST00000410194 145 ntBASIC4.28□□□□□ -1.72
UBE3BQ7Z3V4 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC4.28□□□□□ -1.72
UBE3BQ7Z3V4 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.28□□□□□ -1.72
UBE3BQ7Z3V4 AC005517.2-201ENST00000424673 553 ntBASIC4.28□□□□□ -1.72
UBE3BQ7Z3V4 AL513185.2-201ENST00000425543 193 ntBASIC4.28□□□□□ -1.72
UBE3BQ7Z3V4 FTH1P6-201ENST00000430768 320 ntBASIC4.28□□□□□ -1.72
UBE3BQ7Z3V4 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.28□□□□□ -1.72
UBE3BQ7Z3V4 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC4.28□□□□□ -1.72
UBE3BQ7Z3V4 RPS20P20-201ENST00000460498 340 ntBASIC4.28□□□□□ -1.72
UBE3BQ7Z3V4 AL049714.1-201ENST00000466686 347 ntBASIC4.28□□□□□ -1.72
UBE3BQ7Z3V4 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC4.28□□□□□ -1.72
UBE3BQ7Z3V4 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC4.28□□□□□ -1.72
UBE3BQ7Z3V4 RPL21P13-201ENST00000488305 481 ntBASIC4.28□□□□□ -1.72
UBE3BQ7Z3V4 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4.28□□□□□ -1.72
UBE3BQ7Z3V4 TMEM248P1-201ENST00000510579 951 ntBASIC4.28□□□□□ -1.72
UBE3BQ7Z3V4 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
UBE3BQ7Z3V4 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC4.28□□□□□ -1.72
UBE3BQ7Z3V4 AC011979.2-201ENST00000527568 352 ntBASIC4.28□□□□□ -1.72
UBE3BQ7Z3V4 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
UBE3BQ7Z3V4 AP000857.1-201ENST00000532151 543 ntBASIC4.28□□□□□ -1.72
UBE3BQ7Z3V4 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC4.28□□□□□ -1.72
UBE3BQ7Z3V4 MGST1-215ENST00000540056 546 ntTSL 3 BASIC4.28□□□□□ -1.72
UBE3BQ7Z3V4 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC4.28□□□□□ -1.72
UBE3BQ7Z3V4 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC4.28□□□□□ -1.72
UBE3BQ7Z3V4 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC4.28□□□□□ -1.72
UBE3BQ7Z3V4 AL669831.4-202ENST00000590817 238 ntBASIC4.28□□□□□ -1.72
UBE3BQ7Z3V4 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC4.28□□□□□ -1.72
UBE3BQ7Z3V4 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC4.28□□□□□ -1.72
UBE3BQ7Z3V4 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC4.28□□□□□ -1.72
UBE3BQ7Z3V4 MFF-206ENST00000392059 1710 ntTSL 5 BASIC4.28□□□□□ -1.72
UBE3BQ7Z3V4 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
UBE3BQ7Z3V4 PNPT1P2-201ENST00000456768 2050 ntBASIC4.28□□□□□ -1.72
UBE3BQ7Z3V4 HSPA8P1-201ENST00000425843 1833 ntBASIC4.28□□□□□ -1.72
UBE3BQ7Z3V4 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC4.28□□□□□ -1.73
UBE3BQ7Z3V4 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
UBE3BQ7Z3V4 RPS4XP5-202ENST00000449995 1334 ntBASIC4.27□□□□□ -1.73
UBE3BQ7Z3V4 AC032011.1-201ENST00000611703 1549 ntBASIC4.27□□□□□ -1.73
UBE3BQ7Z3V4 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
UBE3BQ7Z3V4 Y_RNA.22-201ENST00000362492 102 ntBASIC4.27□□□□□ -1.73
UBE3BQ7Z3V4 Y_RNA.263-201ENST00000364659 114 ntBASIC4.27□□□□□ -1.73
UBE3BQ7Z3V4 RNA5SP239-201ENST00000410218 129 ntBASIC4.27□□□□□ -1.73
UBE3BQ7Z3V4 UBE2Q2P12-201ENST00000414573 204 ntBASIC4.27□□□□□ -1.73
UBE3BQ7Z3V4 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC4.27□□□□□ -1.73
UBE3BQ7Z3V4 ATP6V0E1P4-201ENST00000427294 242 ntBASIC4.27□□□□□ -1.73
UBE3BQ7Z3V4 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC4.27□□□□□ -1.73
UBE3BQ7Z3V4 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC4.27□□□□□ -1.73
UBE3BQ7Z3V4 RPS20P5-201ENST00000434808 360 ntBASIC4.27□□□□□ -1.73
UBE3BQ7Z3V4 BNIP3P2-201ENST00000441221 577 ntBASIC4.27□□□□□ -1.73
UBE3BQ7Z3V4 AC092001.1-201ENST00000453012 261 ntBASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms