Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 SNRPEP10-201ENST00000420249 274 ntBASIC0.68□□□□□ -2.3
VPS13DQ5THJ4 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC0.68□□□□□ -2.3
VPS13DQ5THJ4 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC0.68□□□□□ -2.3
VPS13DQ5THJ4 AC090953.1-201ENST00000604305 1092 ntBASIC0.68□□□□□ -2.3
VPS13DQ5THJ4 AL133507.1-201ENST00000605269 557 ntBASIC0.68□□□□□ -2.3
VPS13DQ5THJ4 AC097468.3-201ENST00000607956 456 ntBASIC0.68□□□□□ -2.3
VPS13DQ5THJ4 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC0.68□□□□□ -2.3
VPS13DQ5THJ4 AL162373.1-201ENST00000620433 407 ntBASIC0.68□□□□□ -2.3
VPS13DQ5THJ4 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC0.68□□□□□ -2.3
VPS13DQ5THJ4 RPS6P14-201ENST00000425165 719 ntBASIC0.68□□□□□ -2.3
VPS13DQ5THJ4 AP003072.2-201ENST00000527756 676 ntBASIC0.68□□□□□ -2.3
VPS13DQ5THJ4 AC012640.5-201ENST00000623897 319 ntBASIC0.68□□□□□ -2.3
VPS13DQ5THJ4 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC0.67□□□□□ -2.3
VPS13DQ5THJ4 OR6C66P-201ENST00000414917 930 ntBASIC0.67□□□□□ -2.3
VPS13DQ5THJ4 AC008127.2-201ENST00000549925 1075 ntBASIC0.67□□□□□ -2.3
VPS13DQ5THJ4 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC0.67□□□□□ -2.3
VPS13DQ5THJ4 RNU1-62P-201ENST00000362599 164 ntBASIC0.67□□□□□ -2.3
VPS13DQ5THJ4 AL356057.2-201ENST00000403318 432 ntBASIC0.67□□□□□ -2.3
VPS13DQ5THJ4 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC0.67□□□□□ -2.3
VPS13DQ5THJ4 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC0.67□□□□□ -2.3
VPS13DQ5THJ4 RNU4-60P-201ENST00000517239 135 ntBASIC0.67□□□□□ -2.3
VPS13DQ5THJ4 MIR4711-201ENST00000578274 70 ntBASIC0.67□□□□□ -2.3
VPS13DQ5THJ4 AC123786.2-201ENST00000603459 275 ntBASIC0.67□□□□□ -2.3
VPS13DQ5THJ4 AC006270.3-201ENST00000605967 1036 ntBASIC0.67□□□□□ -2.3
VPS13DQ5THJ4 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC0.67□□□□□ -2.3
VPS13DQ5THJ4 MIR627-201ENST00000384979 97 ntBASIC0.67□□□□□ -2.3
VPS13DQ5THJ4 SNORA46.1-201ENST00000391069 153 ntBASIC0.67□□□□□ -2.3
VPS13DQ5THJ4 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC0.67□□□□□ -2.3
VPS13DQ5THJ4 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC0.67□□□□□ -2.3
VPS13DQ5THJ4 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC0.67□□□□□ -2.3
VPS13DQ5THJ4 NDUFS5P6-201ENST00000529136 295 ntBASIC0.67□□□□□ -2.3
VPS13DQ5THJ4 CBX3P7-201ENST00000532876 502 ntBASIC0.67□□□□□ -2.3
VPS13DQ5THJ4 AC107214.2-201ENST00000608204 634 ntBASIC0.67□□□□□ -2.3
VPS13DQ5THJ4 RNU6-37P-201ENST00000362692 107 ntBASIC0.66□□□□□ -2.3
VPS13DQ5THJ4 RNU6-11P-201ENST00000364234 107 ntBASIC0.66□□□□□ -2.3
VPS13DQ5THJ4 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC0.66□□□□□ -2.3
VPS13DQ5THJ4 CR848007.2-201ENST00000424918 787 ntBASIC0.66□□□□□ -2.3
VPS13DQ5THJ4 NAP1L1P3-201ENST00000462291 880 ntBASIC0.66□□□□□ -2.3
VPS13DQ5THJ4 RNA5SP330-201ENST00000517096 96 ntBASIC0.66□□□□□ -2.3
VPS13DQ5THJ4 AC092140.2-201ENST00000618027 521 ntBASIC0.66□□□□□ -2.3
VPS13DQ5THJ4 AC073055.1-201ENST00000456901 1621 ntBASIC0.66□□□□□ -2.3
VPS13DQ5THJ4 SNORA31.16-201ENST00000516773 139 ntBASIC0.66□□□□□ -2.3
VPS13DQ5THJ4 AP001180.3-201ENST00000582221 145 ntBASIC0.66□□□□□ -2.3
VPS13DQ5THJ4 AP003117.1-201ENST00000602771 554 ntBASIC0.66□□□□□ -2.3
VPS13DQ5THJ4 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC0.66□□□□□ -2.3
VPS13DQ5THJ4 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC0.66□□□□□ -2.3
VPS13DQ5THJ4 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC0.66□□□□□ -2.3
VPS13DQ5THJ4 RPS27P1-201ENST00000450552 247 ntBASIC0.66□□□□□ -2.3
VPS13DQ5THJ4 AL096840.1-201ENST00000603287 93 ntBASIC0.66□□□□□ -2.3
VPS13DQ5THJ4 FAM71BP1-201ENST00000604431 523 ntBASIC0.66□□□□□ -2.3
VPS13DQ5THJ4 AC020658.4-201ENST00000613987 684 ntBASIC0.66□□□□□ -2.3
VPS13DQ5THJ4 AC009090.3-201ENST00000616553 565 ntBASIC0.66□□□□□ -2.3
VPS13DQ5THJ4 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC0.66□□□□□ -2.3
VPS13DQ5THJ4 Z86062.1-201ENST00000406773 777 ntBASIC0.66□□□□□ -2.3
VPS13DQ5THJ4 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC0.66□□□□□ -2.3
VPS13DQ5THJ4 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC0.66□□□□□ -2.3
VPS13DQ5THJ4 OR9N1P-202ENST00000494289 481 ntBASIC0.66□□□□□ -2.3
VPS13DQ5THJ4 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC0.66□□□□□ -2.3
VPS13DQ5THJ4 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC0.66□□□□□ -2.3
VPS13DQ5THJ4 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC0.66□□□□□ -2.3
VPS13DQ5THJ4 uc_338.9-201ENST00000617424 182 ntBASIC0.66□□□□□ -2.3
VPS13DQ5THJ4 MIR6513-201ENST00000621188 64 ntBASIC0.66□□□□□ -2.3
VPS13DQ5THJ4 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC0.65□□□□□ -2.3
VPS13DQ5THJ4 CISD1P1-201ENST00000393907 327 ntBASIC0.65□□□□□ -2.3
VPS13DQ5THJ4 AL627224.1-201ENST00000448334 444 ntBASIC0.65□□□□□ -2.3
VPS13DQ5THJ4 PSPHP1-201ENST00000450062 261 ntBASIC0.65□□□□□ -2.3
VPS13DQ5THJ4 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC0.65□□□□□ -2.3
VPS13DQ5THJ4 AC021646.1-201ENST00000605469 484 ntBASIC0.65□□□□□ -2.3
VPS13DQ5THJ4 RNA5SP498-201ENST00000411342 120 ntBASIC0.65□□□□□ -2.31
VPS13DQ5THJ4 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC0.65□□□□□ -2.31
VPS13DQ5THJ4 EBAG9P1-201ENST00000418955 543 ntBASIC0.65□□□□□ -2.31
VPS13DQ5THJ4 GDI2P2-201ENST00000445131 608 ntBASIC0.65□□□□□ -2.31
VPS13DQ5THJ4 AL360221.1-201ENST00000445989 335 ntBASIC0.65□□□□□ -2.31
VPS13DQ5THJ4 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC0.65□□□□□ -2.31
VPS13DQ5THJ4 MRPS33P3-201ENST00000513456 322 ntBASIC0.65□□□□□ -2.31
VPS13DQ5THJ4 OR6C7P-201ENST00000547875 934 ntBASIC0.65□□□□□ -2.31
VPS13DQ5THJ4 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC0.65□□□□□ -2.31
VPS13DQ5THJ4 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC0.65□□□□□ -2.31
VPS13DQ5THJ4 LLPHP1-201ENST00000603571 367 ntBASIC0.65□□□□□ -2.31
VPS13DQ5THJ4 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.65□□□□□ -2.31
VPS13DQ5THJ4 RPL7P34-201ENST00000433316 712 ntBASIC0.65□□□□□ -2.31
VPS13DQ5THJ4 ELOCP10-201ENST00000440624 327 ntBASIC0.65□□□□□ -2.31
VPS13DQ5THJ4 HAR1A.1-201ENST00000459583 118 ntBASIC0.65□□□□□ -2.31
VPS13DQ5THJ4 OSBPL9P3-201ENST00000534523 595 ntBASIC0.65□□□□□ -2.31
VPS13DQ5THJ4 ELOCP34-201ENST00000604436 327 ntBASIC0.65□□□□□ -2.31
VPS13DQ5THJ4 MIR1285-1-201ENST00000408593 84 ntBASIC0.64□□□□□ -2.31
VPS13DQ5THJ4 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC0.64□□□□□ -2.31
VPS13DQ5THJ4 AC234775.1-201ENST00000454247 670 ntBASIC0.64□□□□□ -2.31
VPS13DQ5THJ4 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC0.64□□□□□ -2.31
VPS13DQ5THJ4 AC107032.1-201ENST00000485945 480 ntBASIC0.64□□□□□ -2.31
VPS13DQ5THJ4 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.64□□□□□ -2.31
VPS13DQ5THJ4 AC005332.10-201ENST00000612725 619 ntBASIC0.64□□□□□ -2.31
VPS13DQ5THJ4 AC008083.4-201ENST00000615076 444 ntBASIC0.64□□□□□ -2.31
VPS13DQ5THJ4 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.64□□□□□ -2.31
VPS13DQ5THJ4 AC092745.2-202ENST00000411880 369 ntBASIC0.64□□□□□ -2.31
VPS13DQ5THJ4 AL121769.1-201ENST00000469473 401 ntBASIC0.64□□□□□ -2.31
VPS13DQ5THJ4 HMGB3P3-201ENST00000510526 400 ntBASIC0.64□□□□□ -2.31
VPS13DQ5THJ4 HSBP1P1-201ENST00000555205 166 ntBASIC0.64□□□□□ -2.31
VPS13DQ5THJ4 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC0.64□□□□□ -2.31
VPS13DQ5THJ4 RNU6-222P-201ENST00000362438 107 ntBASIC0.64□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 118.7 ms