Protein–RNA interactions for Protein: Q12946

FOXF1, Forkhead box protein F1, humanhuman

Predictions only

Length 379 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXF1Q12946 AL450338.1-201ENST00000407987 512 ntBASIC1.78□□□□□ -2.12
FOXF1Q12946 AC007435.1-201ENST00000421086 415 ntBASIC1.78□□□□□ -2.12
FOXF1Q12946 AL365496.1-201ENST00000426885 215 ntBASIC1.78□□□□□ -2.12
FOXF1Q12946 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC1.78□□□□□ -2.12
FOXF1Q12946 AL590383.1-201ENST00000428602 75 ntBASIC1.78□□□□□ -2.12
FOXF1Q12946 TRBV26OR9-2-201ENST00000432077 293 ntBASIC1.78□□□□□ -2.12
FOXF1Q12946 AC024082.2-201ENST00000434771 238 ntBASIC1.78□□□□□ -2.12
FOXF1Q12946 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC1.78□□□□□ -2.12
FOXF1Q12946 AC090774.1-201ENST00000435925 246 ntBASIC1.78□□□□□ -2.12
FOXF1Q12946 AC093155.1-201ENST00000440164 826 ntBASIC1.78□□□□□ -2.12
FOXF1Q12946 CBWD4P-201ENST00000445695 655 ntBASIC1.78□□□□□ -2.12
FOXF1Q12946 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC1.78□□□□□ -2.12
FOXF1Q12946 AL592447.1-201ENST00000447592 540 ntBASIC1.78□□□□□ -2.12
FOXF1Q12946 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
FOXF1Q12946 HMGB3P3-201ENST00000510526 400 ntBASIC1.78□□□□□ -2.12
FOXF1Q12946 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC1.78□□□□□ -2.12
FOXF1Q12946 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC1.78□□□□□ -2.12
FOXF1Q12946 OR5BM1P-201ENST00000512021 366 ntBASIC1.78□□□□□ -2.12
FOXF1Q12946 CASP1P1-201ENST00000526345 212 ntBASIC1.78□□□□□ -2.12
FOXF1Q12946 AMZ2P1-203ENST00000565833 850 ntBASIC1.78□□□□□ -2.12
FOXF1Q12946 ANKRD36BP2-206ENST00000575193 1245 ntBASIC1.78□□□□□ -2.12
FOXF1Q12946 MIR3912-201ENST00000577566 105 ntBASIC1.78□□□□□ -2.12
FOXF1Q12946 MIR3945-201ENST00000581853 98 ntBASIC1.78□□□□□ -2.12
FOXF1Q12946 AC105224.1-201ENST00000587055 421 ntBASIC1.78□□□□□ -2.12
FOXF1Q12946 AL031176.1-201ENST00000604554 466 ntBASIC1.78□□□□□ -2.12
FOXF1Q12946 AL136363.1-201ENST00000605349 337 ntBASIC1.78□□□□□ -2.12
FOXF1Q12946 AC087241.4-201ENST00000612441 480 ntBASIC1.78□□□□□ -2.12
FOXF1Q12946 MIR6130-201ENST00000619419 109 ntBASIC1.78□□□□□ -2.12
FOXF1Q12946 AC011330.2-201ENST00000621680 635 ntBASIC1.78□□□□□ -2.12
FOXF1Q12946 YWHAEP7-203ENST00000622054 312 ntBASIC1.78□□□□□ -2.12
FOXF1Q12946 AC244517.12-201ENST00000623581 663 ntBASIC1.78□□□□□ -2.12
FOXF1Q12946 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC1.78□□□□□ -2.12
FOXF1Q12946 OR1S1-201ENST00000624470 978 ntBASIC1.78□□□□□ -2.12
FOXF1Q12946 MIR1322-201ENST00000638013 71 ntBASIC1.78□□□□□ -2.12
FOXF1Q12946 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC1.78□□□□□ -2.12
FOXF1Q12946 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.78□□□□□ -2.12
FOXF1Q12946 AL109809.4-201ENST00000603520 2185 ntBASIC1.78□□□□□ -2.13
FOXF1Q12946 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC1.78□□□□□ -2.13
FOXF1Q12946 MTND5P29-201ENST00000458676 1807 ntBASIC1.77□□□□□ -2.13
FOXF1Q12946 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
FOXF1Q12946 CDR1-202ENST00000625883 1485 ntBASIC1.77□□□□□ -2.13
FOXF1Q12946 AC107982.1-201ENST00000507171 1300 ntBASIC1.77□□□□□ -2.13
FOXF1Q12946 MIR135A2-201ENST00000384854 100 ntBASIC1.77□□□□□ -2.13
FOXF1Q12946 RNU2-43P-201ENST00000410306 190 ntBASIC1.77□□□□□ -2.13
FOXF1Q12946 VN1R51P-201ENST00000411675 945 ntBASIC1.77□□□□□ -2.13
FOXF1Q12946 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC1.77□□□□□ -2.13
FOXF1Q12946 MTND4P3-201ENST00000417829 541 ntBASIC1.77□□□□□ -2.13
FOXF1Q12946 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC1.77□□□□□ -2.13
FOXF1Q12946 RPL7P37-201ENST00000425095 738 ntBASIC1.77□□□□□ -2.13
FOXF1Q12946 AC007742.1-201ENST00000425789 329 ntBASIC1.77□□□□□ -2.13
FOXF1Q12946 C1DP1-201ENST00000426049 402 ntBASIC1.77□□□□□ -2.13
FOXF1Q12946 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC1.77□□□□□ -2.13
FOXF1Q12946 AL356867.1-201ENST00000429623 299 ntBASIC1.77□□□□□ -2.13
FOXF1Q12946 ELOCP26-201ENST00000436067 329 ntBASIC1.77□□□□□ -2.13
FOXF1Q12946 ARPC3P1-201ENST00000437218 533 ntBASIC1.77□□□□□ -2.13
FOXF1Q12946 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC1.77□□□□□ -2.13
FOXF1Q12946 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC1.77□□□□□ -2.13
FOXF1Q12946 AL353691.1-201ENST00000451332 387 ntBASIC1.77□□□□□ -2.13
FOXF1Q12946 OFD1P3Y-201ENST00000453312 783 ntBASIC1.77□□□□□ -2.13
FOXF1Q12946 AC087588.1-201ENST00000462203 316 ntBASIC1.77□□□□□ -2.13
FOXF1Q12946 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC1.77□□□□□ -2.13
FOXF1Q12946 AC108734.3-201ENST00000481241 1165 ntBASIC1.77□□□□□ -2.13
FOXF1Q12946 MTAPP1-201ENST00000489154 819 ntBASIC1.77□□□□□ -2.13
FOXF1Q12946 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC1.77□□□□□ -2.13
FOXF1Q12946 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC1.77□□□□□ -2.13
FOXF1Q12946 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC1.77□□□□□ -2.13
FOXF1Q12946 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC1.77□□□□□ -2.13
FOXF1Q12946 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC1.77□□□□□ -2.13
FOXF1Q12946 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC1.77□□□□□ -2.13
FOXF1Q12946 RANP3-201ENST00000530970 276 ntBASIC1.77□□□□□ -2.13
FOXF1Q12946 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC1.77□□□□□ -2.13
FOXF1Q12946 YWHAZP1-201ENST00000556286 722 ntBASIC1.77□□□□□ -2.13
FOXF1Q12946 MIR5708-201ENST00000579723 85 ntBASIC1.77□□□□□ -2.13
FOXF1Q12946 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC1.77□□□□□ -2.13
FOXF1Q12946 AL356280.1-201ENST00000603614 379 ntBASIC1.77□□□□□ -2.13
FOXF1Q12946 APOOP1-201ENST00000604695 592 ntBASIC1.77□□□□□ -2.13
FOXF1Q12946 AC024060.1-201ENST00000607052 494 ntBASIC1.77□□□□□ -2.13
FOXF1Q12946 TUG1_1.1-201ENST00000610654 145 ntBASIC1.77□□□□□ -2.13
FOXF1Q12946 HOTTIP_4.1-201ENST00000618195 165 ntBASIC1.77□□□□□ -2.13
FOXF1Q12946 AL512427.1-201ENST00000618593 349 ntBASIC1.77□□□□□ -2.13
FOXF1Q12946 AP003476.1-201ENST00000623984 516 ntBASIC1.77□□□□□ -2.13
FOXF1Q12946 AC126544.2-201ENST00000625174 749 ntBASIC1.77□□□□□ -2.13
FOXF1Q12946 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.77□□□□□ -2.13
FOXF1Q12946 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
FOXF1Q12946 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC1.77□□□□□ -2.13
FOXF1Q12946 AC004944.1-201ENST00000517807 3059 ntBASIC1.77□□□□□ -2.13
FOXF1Q12946 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
FOXF1Q12946 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC1.76□□□□□ -2.13
FOXF1Q12946 MTND4P1-201ENST00000457501 1466 ntBASIC1.76□□□□□ -2.13
FOXF1Q12946 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.76□□□□□ -2.13
FOXF1Q12946 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.76□□□□□ -2.13
FOXF1Q12946 AC022336.2-201ENST00000568966 2538 ntBASIC1.76□□□□□ -2.13
FOXF1Q12946 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC1.76□□□□□ -2.13
FOXF1Q12946 AL603865.2-201ENST00000401679 213 ntBASIC1.76□□□□□ -2.13
FOXF1Q12946 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC1.76□□□□□ -2.13
FOXF1Q12946 NPM1P11-201ENST00000417106 855 ntBASIC1.76□□□□□ -2.13
FOXF1Q12946 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC1.76□□□□□ -2.13
FOXF1Q12946 EIF1AXP1-201ENST00000419267 435 ntBASIC1.76□□□□□ -2.13
FOXF1Q12946 ACTR3BP6-201ENST00000422332 1241 ntBASIC1.76□□□□□ -2.13
FOXF1Q12946 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC1.76□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms