Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 AC007038.2-201ENST00000608095 740 ntBASIC0.45□□□□□ -2.34
RPL39P62891 AC108706.1-201ENST00000611053 297 ntBASIC0.45□□□□□ -2.34
RPL39P62891 RN7SL853P-201ENST00000617250 223 ntBASIC0.45□□□□□ -2.34
RPL39P62891 AC008121.3-201ENST00000618726 433 ntBASIC0.45□□□□□ -2.34
RPL39P62891 AC020923.1-201ENST00000624021 917 ntBASIC0.45□□□□□ -2.34
RPL39P62891 AP003072.4-201ENST00000624580 310 ntBASIC0.45□□□□□ -2.34
RPL39P62891 AC091925.2-201ENST00000625059 256 ntBASIC0.45□□□□□ -2.34
RPL39P62891 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC0.45□□□□□ -2.34
RPL39P62891 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC0.44□□□□□ -2.34
RPL39P62891 AC008163.1-202ENST00000636004 2889 ntBASIC0.44□□□□□ -2.34
RPL39P62891 AC009541.1-201ENST00000438279 2662 ntBASIC0.44□□□□□ -2.34
RPL39P62891 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC0.44□□□□□ -2.34
RPL39P62891 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC0.44□□□□□ -2.34
RPL39P62891 SNORA51.12-201ENST00000384448 134 ntBASIC0.44□□□□□ -2.34
RPL39P62891 MIR92A1-201ENST00000385233 78 ntBASIC0.44□□□□□ -2.34
RPL39P62891 AL589655.1-201ENST00000405398 482 ntBASIC0.44□□□□□ -2.34
RPL39P62891 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC0.44□□□□□ -2.34
RPL39P62891 OFD1P12Y-201ENST00000427963 1207 ntBASIC0.44□□□□□ -2.34
RPL39P62891 AC244505.5-201ENST00000443639 207 ntBASIC0.44□□□□□ -2.34
RPL39P62891 Z99714.1-201ENST00000450463 807 ntBASIC0.44□□□□□ -2.34
RPL39P62891 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC0.44□□□□□ -2.34
RPL39P62891 snoU13.23-201ENST00000458863 104 ntBASIC0.44□□□□□ -2.34
RPL39P62891 RNU6-775P-201ENST00000459318 96 ntBASIC0.44□□□□□ -2.34
RPL39P62891 AC104997.1-201ENST00000519761 717 ntBASIC0.44□□□□□ -2.34
RPL39P62891 AP003484.1-201ENST00000530974 250 ntBASIC0.44□□□□□ -2.34
RPL39P62891 AC015712.3-201ENST00000559380 164 ntBASIC0.44□□□□□ -2.34
RPL39P62891 MIR3198-2-201ENST00000577868 80 ntBASIC0.44□□□□□ -2.34
RPL39P62891 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC0.44□□□□□ -2.34
RPL39P62891 AC016925.2-201ENST00000605108 242 ntBASIC0.44□□□□□ -2.34
RPL39P62891 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC0.44□□□□□ -2.34
RPL39P62891 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC0.44□□□□□ -2.34
RPL39P62891 MIR6076-201ENST00000617521 113 ntBASIC0.44□□□□□ -2.34
RPL39P62891 AL449363.1-201ENST00000617815 186 ntBASIC0.44□□□□□ -2.34
RPL39P62891 MIR6835-201ENST00000621552 64 ntBASIC0.44□□□□□ -2.34
RPL39P62891 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC0.44□□□□□ -2.34
RPL39P62891 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.43□□□□□ -2.34
RPL39P62891 AC018630.2-201ENST00000534866 2403 ntBASIC0.43□□□□□ -2.34
RPL39P62891 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC0.43□□□□□ -2.34
RPL39P62891 RNA5SP276-201ENST00000362580 94 ntBASIC0.43□□□□□ -2.34
RPL39P62891 RNA5SP99-201ENST00000364020 114 ntBASIC0.43□□□□□ -2.34
RPL39P62891 SNORA18.2-201ENST00000383865 132 ntBASIC0.43□□□□□ -2.34
RPL39P62891 SNORA70.7-201ENST00000384159 133 ntBASIC0.43□□□□□ -2.34
RPL39P62891 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC0.43□□□□□ -2.34
RPL39P62891 UBE2D3P2-201ENST00000424409 445 ntBASIC0.43□□□□□ -2.34
RPL39P62891 AC004941.2-201ENST00000427009 228 ntBASIC0.43□□□□□ -2.34
RPL39P62891 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC0.43□□□□□ -2.34
RPL39P62891 AL591043.1-201ENST00000432461 424 ntBASIC0.43□□□□□ -2.34
RPL39P62891 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC0.43□□□□□ -2.34
RPL39P62891 KLF3P2-201ENST00000465138 268 ntBASIC0.43□□□□□ -2.34
RPL39P62891 AC025181.1-201ENST00000477507 416 ntBASIC0.43□□□□□ -2.34
RPL39P62891 AC018437.1-201ENST00000492214 406 ntBASIC0.43□□□□□ -2.34
RPL39P62891 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC0.43□□□□□ -2.34
RPL39P62891 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC0.43□□□□□ -2.34
RPL39P62891 AC109927.2-201ENST00000506416 303 ntBASIC0.43□□□□□ -2.34
RPL39P62891 CBX3P3-201ENST00000508108 532 ntBASIC0.43□□□□□ -2.34
RPL39P62891 FAM206BP-201ENST00000510179 541 ntBASIC0.43□□□□□ -2.34
RPL39P62891 RNU6-113P-201ENST00000516653 101 ntBASIC0.43□□□□□ -2.34
RPL39P62891 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC0.43□□□□□ -2.34
RPL39P62891 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC0.43□□□□□ -2.34
RPL39P62891 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC0.43□□□□□ -2.34
RPL39P62891 MIR4653-201ENST00000585107 83 ntBASIC0.43□□□□□ -2.34
RPL39P62891 AC098848.2-201ENST00000588023 330 ntBASIC0.43□□□□□ -2.34
RPL39P62891 OR10AB1P-201ENST00000609613 938 ntBASIC0.43□□□□□ -2.34
RPL39P62891 AL590282.1-201ENST00000610379 1136 ntBASIC0.43□□□□□ -2.34
RPL39P62891 DUXAP10-204ENST00000612052 616 ntBASIC0.43□□□□□ -2.34
RPL39P62891 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC0.43□□□□□ -2.34
RPL39P62891 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC0.43□□□□□ -2.34
RPL39P62891 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC0.43□□□□□ -2.34
RPL39P62891 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC0.43□□□□□ -2.34
RPL39P62891 AC008669.1-201ENST00000565823 2178 ntBASIC0.43□□□□□ -2.34
RPL39P62891 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC0.43□□□□□ -2.34
RPL39P62891 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.42□□□□□ -2.34
RPL39P62891 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC0.42□□□□□ -2.34
RPL39P62891 SNORA68.1-201ENST00000364537 132 ntBASIC0.42□□□□□ -2.34
RPL39P62891 RNU6-338P-201ENST00000383888 105 ntBASIC0.42□□□□□ -2.34
RPL39P62891 MIR100-201ENST00000385259 80 ntBASIC0.42□□□□□ -2.34
RPL39P62891 RPL37P10-201ENST00000412884 288 ntBASIC0.42□□□□□ -2.34
RPL39P62891 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.42□□□□□ -2.34
RPL39P62891 AL158823.1-201ENST00000418441 478 ntBASIC0.42□□□□□ -2.34
RPL39P62891 SEPT2P1-201ENST00000419651 180 ntBASIC0.42□□□□□ -2.34
RPL39P62891 AC244636.1-201ENST00000421152 228 ntBASIC0.42□□□□□ -2.34
RPL39P62891 HMGB1P9-201ENST00000429856 646 ntBASIC0.42□□□□□ -2.34
RPL39P62891 UBE2V2P3-201ENST00000433562 437 ntBASIC0.42□□□□□ -2.34
RPL39P62891 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC0.42□□□□□ -2.34
RPL39P62891 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC0.42□□□□□ -2.34
RPL39P62891 FDX1P2-201ENST00000450769 375 ntBASIC0.42□□□□□ -2.34
RPL39P62891 RPL37P6-202ENST00000464216 403 ntBASIC0.42□□□□□ -2.34
RPL39P62891 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC0.42□□□□□ -2.34
RPL39P62891 AC099513.1-201ENST00000490423 301 ntBASIC0.42□□□□□ -2.34
RPL39P62891 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC0.42□□□□□ -2.34
RPL39P62891 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.42□□□□□ -2.34
RPL39P62891 DEFB108E-201ENST00000524692 240 ntBASIC0.42□□□□□ -2.34
RPL39P62891 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC0.42□□□□□ -2.34
RPL39P62891 AL590095.2-201ENST00000604136 117 ntBASIC0.42□□□□□ -2.34
RPL39P62891 AL133216.2-202ENST00000634512 349 ntBASIC0.42□□□□□ -2.34
RPL39P62891 AC083865.1-201ENST00000636634 831 ntBASIC0.42□□□□□ -2.34
RPL39P62891 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC0.42□□□□□ -2.34
RPL39P62891 DDX10P1-201ENST00000448545 1933 ntBASIC0.42□□□□□ -2.34
RPL39P62891 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC0.41□□□□□ -2.34
RPL39P62891 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC0.41□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 133.9 ms