Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 AC117503.1-201ENST00000472241 394 ntBASIC4.68□□□□□ -1.66
PMS1P54277 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.68□□□□□ -1.66
PMS1P54277 CYCSP27-201ENST00000527643 293 ntBASIC4.68□□□□□ -1.66
PMS1P54277 AC022882.1-201ENST00000532142 501 ntBASIC4.68□□□□□ -1.66
PMS1P54277 AC063950.1-201ENST00000552036 308 ntBASIC4.68□□□□□ -1.66
PMS1P54277 BDH2P1-201ENST00000602288 736 ntBASIC4.68□□□□□ -1.66
PMS1P54277 PISRT1.1-201ENST00000616930 107 ntBASIC4.68□□□□□ -1.66
PMS1P54277 AL136964.1-201ENST00000622038 2990 ntBASIC4.68□□□□□ -1.66
PMS1P54277 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC4.68□□□□□ -1.66
PMS1P54277 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.68□□□□□ -1.66
PMS1P54277 AC068254.2-201ENST00000623938 3577 ntBASIC4.68□□□□□ -1.66
PMS1P54277 MTND5P16-201ENST00000460269 1703 ntBASIC4.68□□□□□ -1.66
PMS1P54277 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
PMS1P54277 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.68□□□□□ -1.66
PMS1P54277 PRO1804-201ENST00000623780 2050 ntBASIC4.68□□□□□ -1.66
PMS1P54277 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.68□□□□□ -1.66
PMS1P54277 ZNF962P-201ENST00000443465 3140 ntBASIC4.68□□□□□ -1.66
PMS1P54277 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
PMS1P54277 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
PMS1P54277 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.67□□□□□ -1.66
PMS1P54277 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
PMS1P54277 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.67□□□□□ -1.66
PMS1P54277 KPNA2P1-201ENST00000458289 1591 ntBASIC4.67□□□□□ -1.66
PMS1P54277 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
PMS1P54277 Y_RNA.112-201ENST00000363250 102 ntBASIC4.67□□□□□ -1.66
PMS1P54277 Y_RNA.144-201ENST00000363521 113 ntBASIC4.67□□□□□ -1.66
PMS1P54277 SNORA37-201ENST00000384504 129 ntBASIC4.67□□□□□ -1.66
PMS1P54277 RNA5SP36-201ENST00000410197 133 ntBASIC4.67□□□□□ -1.66
PMS1P54277 RNU4-25P-201ENST00000410569 230 ntBASIC4.67□□□□□ -1.66
PMS1P54277 Y_RNA.646-201ENST00000410980 101 ntBASIC4.67□□□□□ -1.66
PMS1P54277 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC4.67□□□□□ -1.66
PMS1P54277 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC4.67□□□□□ -1.66
PMS1P54277 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4.67□□□□□ -1.66
PMS1P54277 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.67□□□□□ -1.66
PMS1P54277 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC4.67□□□□□ -1.66
PMS1P54277 PHBP16-201ENST00000446318 950 ntBASIC4.67□□□□□ -1.66
PMS1P54277 AC008264.1-201ENST00000447612 367 ntBASIC4.67□□□□□ -1.66
PMS1P54277 AL359073.1-201ENST00000448036 403 ntBASIC4.67□□□□□ -1.66
PMS1P54277 RPL37P6-201ENST00000460682 294 ntBASIC4.67□□□□□ -1.66
PMS1P54277 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC4.67□□□□□ -1.66
PMS1P54277 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC4.67□□□□□ -1.66
PMS1P54277 VN1R104P-201ENST00000505115 1009 ntBASIC4.67□□□□□ -1.66
PMS1P54277 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC4.67□□□□□ -1.66
PMS1P54277 RNA5SP360-201ENST00000516555 118 ntBASIC4.67□□□□□ -1.66
PMS1P54277 RNU1-54P-201ENST00000517181 120 ntBASIC4.67□□□□□ -1.66
PMS1P54277 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC4.67□□□□□ -1.66
PMS1P54277 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC4.67□□□□□ -1.66
PMS1P54277 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC4.67□□□□□ -1.66
PMS1P54277 HMGN2P28-201ENST00000606102 262 ntBASIC4.67□□□□□ -1.66
PMS1P54277 AL353748.2-201ENST00000622148 471 ntBASIC4.67□□□□□ -1.66
PMS1P54277 AP000346.3-201ENST00000622821 210 ntBASIC4.67□□□□□ -1.66
PMS1P54277 AC008785.1-201ENST00000624475 456 ntBASIC4.67□□□□□ -1.66
PMS1P54277 AC140479.6-201ENST00000633535 357 ntBASIC4.67□□□□□ -1.66
PMS1P54277 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC4.67□□□□□ -1.66
PMS1P54277 AL158163.1-201ENST00000603915 1649 ntBASIC4.67□□□□□ -1.66
PMS1P54277 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.67□□□□□ -1.66
PMS1P54277 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.67□□□□□ -1.66
PMS1P54277 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
PMS1P54277 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
PMS1P54277 AL049641.1-201ENST00000441055 1948 ntBASIC4.66□□□□□ -1.66
PMS1P54277 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
PMS1P54277 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
PMS1P54277 ZBTB8OSP1-201ENST00000342688 498 ntBASIC4.66□□□□□ -1.66
PMS1P54277 RNU6-45P-201ENST00000384471 107 ntBASIC4.66□□□□□ -1.66
PMS1P54277 MIR124-3-201ENST00000384866 87 ntBASIC4.66□□□□□ -1.66
PMS1P54277 AL121834.1-202ENST00000404494 277 ntBASIC4.66□□□□□ -1.66
PMS1P54277 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.66□□□□□ -1.66
PMS1P54277 RPL23AP81-201ENST00000455252 467 ntBASIC4.66□□□□□ -1.66
PMS1P54277 UBE2Q2P9-201ENST00000490086 202 ntBASIC4.66□□□□□ -1.66
PMS1P54277 AC116337.1-201ENST00000509680 687 ntBASIC4.66□□□□□ -1.66
PMS1P54277 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.66□□□□□ -1.66
PMS1P54277 SNORA31.3-201ENST00000516029 96 ntBASIC4.66□□□□□ -1.66
PMS1P54277 RNU6-976P-201ENST00000516086 111 ntBASIC4.66□□□□□ -1.66
PMS1P54277 RNA5SP519-201ENST00000516480 119 ntBASIC4.66□□□□□ -1.66
PMS1P54277 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
PMS1P54277 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC4.66□□□□□ -1.66
PMS1P54277 DNAJC8P1-201ENST00000554535 372 ntBASIC4.66□□□□□ -1.66
PMS1P54277 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC4.66□□□□□ -1.66
PMS1P54277 AC005951.2-201ENST00000576282 495 ntBASIC4.66□□□□□ -1.66
PMS1P54277 MIR3671-201ENST00000580455 88 ntBASIC4.66□□□□□ -1.66
PMS1P54277 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC4.66□□□□□ -1.66
PMS1P54277 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC4.66□□□□□ -1.66
PMS1P54277 AC012119.1-201ENST00000603184 222 ntBASIC4.66□□□□□ -1.66
PMS1P54277 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
PMS1P54277 AL078596.1-201ENST00000624856 447 ntBASIC4.66□□□□□ -1.66
PMS1P54277 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
PMS1P54277 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.66□□□□□ -1.66
PMS1P54277 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.66□□□□□ -1.66
PMS1P54277 AC011266.1-201ENST00000624119 3569 ntBASIC4.66□□□□□ -1.66
PMS1P54277 CD36-221ENST00000534394 1741 ntTSL 2 BASIC4.66□□□□□ -1.66
PMS1P54277 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
PMS1P54277 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.66□□□□□ -1.66
PMS1P54277 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.65□□□□□ -1.66
PMS1P54277 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
PMS1P54277 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.66
PMS1P54277 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC4.65□□□□□ -1.66
PMS1P54277 RNA5SP388-201ENST00000362584 119 ntBASIC4.65□□□□□ -1.67
PMS1P54277 SNORD3E-201ENST00000362899 217 ntBASIC4.65□□□□□ -1.67
PMS1P54277 RNA5SP447-201ENST00000363749 119 ntBASIC4.65□□□□□ -1.67
PMS1P54277 MIR93-201ENST00000385024 80 ntBASIC4.65□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 128.4 ms