Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 RNA5SP25-201ENST00000410815 110 ntBASIC0.86□□□□□ -2.27
BRCA2P51587 MTCO1P43-201ENST00000431831 488 ntBASIC0.86□□□□□ -2.27
BRCA2P51587 RPS29P28-201ENST00000446439 141 ntBASIC0.86□□□□□ -2.27
BRCA2P51587 MIR4653-201ENST00000585107 83 ntBASIC0.86□□□□□ -2.27
BRCA2P51587 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC0.86□□□□□ -2.27
BRCA2P51587 RNU1-23P-201ENST00000363361 144 ntBASIC0.86□□□□□ -2.27
BRCA2P51587 AL445213.1-201ENST00000412589 747 ntBASIC0.86□□□□□ -2.27
BRCA2P51587 OR5AQ1P-201ENST00000527596 927 ntBASIC0.86□□□□□ -2.27
BRCA2P51587 ACTR3BP3-201ENST00000565577 979 ntBASIC0.86□□□□□ -2.27
BRCA2P51587 AC079148.1-201ENST00000565944 819 ntBASIC0.86□□□□□ -2.27
BRCA2P51587 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.85□□□□□ -2.27
BRCA2P51587 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
BRCA2P51587 RNU6-234P-201ENST00000365229 104 ntBASIC0.85□□□□□ -2.27
BRCA2P51587 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC0.85□□□□□ -2.27
BRCA2P51587 ARF4P4-201ENST00000439608 520 ntBASIC0.85□□□□□ -2.27
BRCA2P51587 RPL21P39-201ENST00000463605 483 ntBASIC0.85□□□□□ -2.27
BRCA2P51587 AC023050.2-201ENST00000544968 387 ntBASIC0.85□□□□□ -2.27
BRCA2P51587 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
BRCA2P51587 RPS23P3-201ENST00000470993 430 ntBASIC0.85□□□□□ -2.27
BRCA2P51587 HMGN1P10-201ENST00000474557 553 ntBASIC0.85□□□□□ -2.27
BRCA2P51587 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC0.85□□□□□ -2.27
BRCA2P51587 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC0.85□□□□□ -2.27
BRCA2P51587 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC0.85□□□□□ -2.27
BRCA2P51587 HMGB1P9-201ENST00000429856 646 ntBASIC0.85□□□□□ -2.27
BRCA2P51587 AC008379.1-201ENST00000463655 464 ntBASIC0.85□□□□□ -2.27
BRCA2P51587 SETP2-201ENST00000553886 926 ntBASIC0.85□□□□□ -2.27
BRCA2P51587 MIR3122-201ENST00000577243 73 ntBASIC0.85□□□□□ -2.27
BRCA2P51587 BNIP3P26-201ENST00000600827 554 ntBASIC0.85□□□□□ -2.27
BRCA2P51587 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC0.84□□□□□ -2.27
BRCA2P51587 MIR150-201ENST00000385048 84 ntBASIC0.84□□□□□ -2.27
BRCA2P51587 AL500527.1-201ENST00000448532 255 ntBASIC0.84□□□□□ -2.27
BRCA2P51587 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC0.84□□□□□ -2.27
BRCA2P51587 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC0.84□□□□□ -2.27
BRCA2P51587 SCARNA1-201ENST00000517138 166 ntBASIC0.84□□□□□ -2.27
BRCA2P51587 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC0.84□□□□□ -2.27
BRCA2P51587 UBE2L4-201ENST00000587688 464 ntBASIC0.84□□□□□ -2.27
BRCA2P51587 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC0.84□□□□□ -2.28
BRCA2P51587 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC0.84□□□□□ -2.28
BRCA2P51587 AL137072.1-201ENST00000603444 466 ntBASIC0.84□□□□□ -2.28
BRCA2P51587 AL050343.2-201ENST00000607338 280 ntBASIC0.84□□□□□ -2.28
BRCA2P51587 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC0.84□□□□□ -2.28
BRCA2P51587 UBE2V2P1-201ENST00000434717 398 ntBASIC0.83□□□□□ -2.28
BRCA2P51587 RPS20P20-201ENST00000460498 340 ntBASIC0.83□□□□□ -2.28
BRCA2P51587 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC0.83□□□□□ -2.28
BRCA2P51587 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC0.83□□□□□ -2.28
BRCA2P51587 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC0.83□□□□□ -2.28
BRCA2P51587 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC0.83□□□□□ -2.28
BRCA2P51587 RNA5SP511-201ENST00000410487 115 ntBASIC0.83□□□□□ -2.28
BRCA2P51587 AL161651.1-201ENST00000440882 223 ntBASIC0.83□□□□□ -2.28
BRCA2P51587 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC0.83□□□□□ -2.28
BRCA2P51587 AC112198.4-201ENST00000515450 351 ntBASIC0.83□□□□□ -2.28
BRCA2P51587 AL118496.1-201ENST00000440201 1812 ntBASIC0.83□□□□□ -2.28
BRCA2P51587 RNA5SP347-201ENST00000362445 119 ntBASIC0.83□□□□□ -2.28
BRCA2P51587 NDUFS5P3-201ENST00000450668 321 ntBASIC0.83□□□□□ -2.28
BRCA2P51587 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC0.83□□□□□ -2.28
BRCA2P51587 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC0.83□□□□□ -2.28
BRCA2P51587 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC0.83□□□□□ -2.28
BRCA2P51587 SNORA23-201ENST00000365128 182 ntBASIC0.82□□□□□ -2.28
BRCA2P51587 Y_RNA.571-201ENST00000384753 98 ntBASIC0.82□□□□□ -2.28
BRCA2P51587 RNU2-70P-201ENST00000410718 179 ntBASIC0.82□□□□□ -2.28
BRCA2P51587 AC104692.1-201ENST00000472406 90 ntBASIC0.82□□□□□ -2.28
BRCA2P51587 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC0.82□□□□□ -2.28
BRCA2P51587 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC0.82□□□□□ -2.28
BRCA2P51587 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
BRCA2P51587 LIAS-206ENST00000513731 826 ntTSL 5 BASIC0.82□□□□□ -2.28
BRCA2P51587 OR4R1P-201ENST00000529879 463 ntBASIC0.82□□□□□ -2.28
BRCA2P51587 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC0.82□□□□□ -2.28
BRCA2P51587 PABPC1P3-201ENST00000469174 459 ntBASIC0.82□□□□□ -2.28
BRCA2P51587 AC018437.1-201ENST00000492214 406 ntBASIC0.82□□□□□ -2.28
BRCA2P51587 BLNK-209ENST00000495266 440 ntTSL 5 BASIC0.82□□□□□ -2.28
BRCA2P51587 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC0.82□□□□□ -2.28
BRCA2P51587 MIR4514-201ENST00000581410 57 ntBASIC0.82□□□□□ -2.28
BRCA2P51587 MTND4P27-201ENST00000450813 1354 ntBASIC0.81□□□□□ -2.28
BRCA2P51587 AL136380.1-201ENST00000447970 162 ntBASIC0.81□□□□□ -2.28
BRCA2P51587 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC0.81□□□□□ -2.28
BRCA2P51587 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC0.81□□□□□ -2.28
BRCA2P51587 RNU6-43P-201ENST00000384302 107 ntBASIC0.81□□□□□ -2.28
BRCA2P51587 RPL21P24-201ENST00000413752 448 ntBASIC0.81□□□□□ -2.28
BRCA2P51587 MORF4L1P7-201ENST00000426038 703 ntBASIC0.81□□□□□ -2.28
BRCA2P51587 PTGES3P5-201ENST00000455109 434 ntBASIC0.81□□□□□ -2.28
BRCA2P51587 AC012181.1-201ENST00000479895 423 ntBASIC0.81□□□□□ -2.28
BRCA2P51587 HMGN1P30-201ENST00000589286 268 ntBASIC0.81□□□□□ -2.28
BRCA2P51587 AC022387.2-201ENST00000604050 448 ntBASIC0.81□□□□□ -2.28
BRCA2P51587 AP002967.1-201ENST00000624203 539 ntBASIC0.81□□□□□ -2.28
BRCA2P51587 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
BRCA2P51587 OR4G2P-201ENST00000328113 903 ntBASIC0.8□□□□□ -2.28
BRCA2P51587 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC0.8□□□□□ -2.28
BRCA2P51587 snoU13.19-201ENST00000459148 104 ntBASIC0.8□□□□□ -2.28
BRCA2P51587 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC0.8□□□□□ -2.28
BRCA2P51587 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC0.8□□□□□ -2.28
BRCA2P51587 AC090897.2-201ENST00000581715 130 ntBASIC0.8□□□□□ -2.28
BRCA2P51587 AC068787.1-201ENST00000623908 691 ntBASIC0.8□□□□□ -2.28
BRCA2P51587 Z82195.2-201ENST00000612348 18351 ntBASIC0.8□□□□□ -2.28
BRCA2P51587 ATG12P2-201ENST00000456830 416 ntBASIC0.8□□□□□ -2.28
BRCA2P51587 AC103810.9-201ENST00000606688 112 ntBASIC0.8□□□□□ -2.28
BRCA2P51587 AC112503.2-201ENST00000609005 552 ntBASIC0.8□□□□□ -2.28
BRCA2P51587 AC243829.6-201ENST00000612652 106 ntBASIC0.8□□□□□ -2.28
BRCA2P51587 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC0.8□□□□□ -2.28
BRCA2P51587 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
BRCA2P51587 AL022718.1-201ENST00000412004 84 ntBASIC0.8□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms