Protein–RNA interactions for Protein: P49711

CTCF, Transcriptional repressor CTCF, humanhuman

Predicted RBP Predictions only

Length 727 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFP49711 AC068724.1-201ENST00000487100 792 ntBASIC3.7□□□□□ -1.82
CTCFP49711 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC3.7□□□□□ -1.82
CTCFP49711 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC3.7□□□□□ -1.82
CTCFP49711 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.7□□□□□ -1.82
CTCFP49711 Y_RNA.695-201ENST00000516715 107 ntBASIC3.7□□□□□ -1.82
CTCFP49711 SNORA31.22-201ENST00000517204 135 ntBASIC3.7□□□□□ -1.82
CTCFP49711 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC3.7□□□□□ -1.82
CTCFP49711 AP000907.2-201ENST00000530827 353 ntBASIC3.7□□□□□ -1.82
CTCFP49711 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CTCFP49711 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC3.7□□□□□ -1.82
CTCFP49711 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC3.7□□□□□ -1.82
CTCFP49711 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3.7□□□□□ -1.82
CTCFP49711 AC005476.1-201ENST00000554427 397 ntBASIC3.7□□□□□ -1.82
CTCFP49711 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.7□□□□□ -1.82
CTCFP49711 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.7□□□□□ -1.82
CTCFP49711 AL391813.2-201ENST00000609113 322 ntBASIC3.7□□□□□ -1.82
CTCFP49711 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC3.7□□□□□ -1.82
CTCFP49711 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC3.7□□□□□ -1.82
CTCFP49711 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.7□□□□□ -1.82
CTCFP49711 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.69□□□□□ -1.82
CTCFP49711 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CTCFP49711 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.69□□□□□ -1.82
CTCFP49711 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC3.69□□□□□ -1.82
CTCFP49711 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CTCFP49711 FGF7P2-201ENST00000332473 296 ntBASIC3.69□□□□□ -1.82
CTCFP49711 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
CTCFP49711 RNU4-91P-201ENST00000364778 135 ntBASIC3.69□□□□□ -1.82
CTCFP49711 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
CTCFP49711 AP002088.1-201ENST00000382740 395 ntBASIC3.69□□□□□ -1.82
CTCFP49711 RNY3P10-201ENST00000384764 102 ntBASIC3.69□□□□□ -1.82
CTCFP49711 AL354719.1-201ENST00000406535 843 ntBASIC3.69□□□□□ -1.82
CTCFP49711 RN7SKP142-201ENST00000411236 328 ntBASIC3.69□□□□□ -1.82
CTCFP49711 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.69□□□□□ -1.82
CTCFP49711 BX276092.3-201ENST00000424182 230 ntBASIC3.69□□□□□ -1.82
CTCFP49711 RPL27AP8-201ENST00000424277 446 ntBASIC3.69□□□□□ -1.82
CTCFP49711 AL353777.1-201ENST00000425552 326 ntBASIC3.69□□□□□ -1.82
CTCFP49711 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CTCFP49711 AP000936.2-201ENST00000447151 681 ntBASIC3.69□□□□□ -1.82
CTCFP49711 RNA5SP269-201ENST00000459032 137 ntBASIC3.69□□□□□ -1.82
CTCFP49711 AC135721.1-201ENST00000497954 479 ntBASIC3.69□□□□□ -1.82
CTCFP49711 AC114967.1-201ENST00000504890 259 ntBASIC3.69□□□□□ -1.82
CTCFP49711 AC109464.2-201ENST00000510242 943 ntBASIC3.69□□□□□ -1.82
CTCFP49711 AC091965.2-201ENST00000512324 613 ntBASIC3.69□□□□□ -1.82
CTCFP49711 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC3.69□□□□□ -1.82
CTCFP49711 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.69□□□□□ -1.82
CTCFP49711 AP006245.1-201ENST00000522549 120 ntBASIC3.69□□□□□ -1.82
CTCFP49711 DEFB108D-201ENST00000527787 222 ntBASIC3.69□□□□□ -1.82
CTCFP49711 AC007115.1-201ENST00000546853 234 ntBASIC3.69□□□□□ -1.82
CTCFP49711 AC123904.2-201ENST00000548059 300 ntBASIC3.69□□□□□ -1.82
CTCFP49711 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.69□□□□□ -1.82
CTCFP49711 AL356432.3-201ENST00000568952 465 ntBASIC3.69□□□□□ -1.82
CTCFP49711 AC068790.3-201ENST00000602988 553 ntBASIC3.69□□□□□ -1.82
CTCFP49711 AC112191.3-201ENST00000604371 277 ntBASIC3.69□□□□□ -1.82
CTCFP49711 AC025754.2-201ENST00000606491 432 ntBASIC3.69□□□□□ -1.82
CTCFP49711 AC108747.1-201ENST00000609508 535 ntBASIC3.69□□□□□ -1.82
CTCFP49711 AC099506.2-201ENST00000623074 221 ntBASIC3.69□□□□□ -1.82
CTCFP49711 AL603839.4-201ENST00000624658 1005 ntBASIC3.69□□□□□ -1.82
CTCFP49711 AC099654.13-201ENST00000639774 207 ntBASIC3.69□□□□□ -1.82
CTCFP49711 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
CTCFP49711 AL513302.2-201ENST00000562313 1842 ntBASIC3.69□□□□□ -1.82
CTCFP49711 MAPK10-362ENST00000641864 4484 ntBASIC3.69□□□□□ -1.82
CTCFP49711 PWAR6-201ENST00000552334 4618 ntBASIC3.69□□□□□ -1.82
CTCFP49711 AC068647.1-201ENST00000489539 2265 ntBASIC3.68□□□□□ -1.82
CTCFP49711 XGY1-201ENST00000381172 446 ntBASIC3.68□□□□□ -1.82
CTCFP49711 RNU6-76P-201ENST00000384060 104 ntBASIC3.68□□□□□ -1.82
CTCFP49711 MIR196B-201ENST00000384852 84 ntBASIC3.68□□□□□ -1.82
CTCFP49711 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
CTCFP49711 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC3.68□□□□□ -1.82
CTCFP49711 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.68□□□□□ -1.82
CTCFP49711 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.68□□□□□ -1.82
CTCFP49711 HIGD1AP11-201ENST00000438361 280 ntBASIC3.68□□□□□ -1.82
CTCFP49711 HMGB3P12-201ENST00000438745 556 ntBASIC3.68□□□□□ -1.82
CTCFP49711 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC3.68□□□□□ -1.82
CTCFP49711 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.68□□□□□ -1.82
CTCFP49711 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC3.68□□□□□ -1.82
CTCFP49711 AC010401.1-201ENST00000463867 348 ntBASIC3.68□□□□□ -1.82
CTCFP49711 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC3.68□□□□□ -1.82
CTCFP49711 RN7SL442P-201ENST00000473804 320 ntBASIC3.68□□□□□ -1.82
CTCFP49711 AC108860.1-201ENST00000484521 383 ntBASIC3.68□□□□□ -1.82
CTCFP49711 RPL23AP41-201ENST00000484754 458 ntBASIC3.68□□□□□ -1.82
CTCFP49711 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC3.68□□□□□ -1.82
CTCFP49711 ANXA2P1-201ENST00000505539 926 ntBASIC3.68□□□□□ -1.82
CTCFP49711 AC022616.6-201ENST00000520479 119 ntBASIC3.68□□□□□ -1.82
CTCFP49711 IGHV3-76-201ENST00000522465 295 ntBASIC3.68□□□□□ -1.82
CTCFP49711 AC022878.1-201ENST00000530684 149 ntBASIC3.68□□□□□ -1.82
CTCFP49711 AL512310.1-201ENST00000548639 172 ntBASIC3.68□□□□□ -1.82
CTCFP49711 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC3.68□□□□□ -1.82
CTCFP49711 NBR2-204ENST00000587322 63 ntBASIC3.68□□□□□ -1.82
CTCFP49711 AC067852.3-201ENST00000589177 561 ntBASIC3.68□□□□□ -1.82
CTCFP49711 AC073544.2-201ENST00000601155 540 ntBASIC3.68□□□□□ -1.82
CTCFP49711 AC079089.3-201ENST00000603094 673 ntBASIC3.68□□□□□ -1.82
CTCFP49711 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.68□□□□□ -1.82
CTCFP49711 AL159972.1-201ENST00000625150 448 ntBASIC3.68□□□□□ -1.82
CTCFP49711 MIR622-201ENST00000638396 96 ntBASIC3.68□□□□□ -1.82
CTCFP49711 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.68□□□□□ -1.82
CTCFP49711 AL390237.1-201ENST00000404226 1415 ntBASIC3.68□□□□□ -1.82
CTCFP49711 HSPA8P4-201ENST00000511877 1920 ntBASIC3.68□□□□□ -1.82
CTCFP49711 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.68□□□□□ -1.82
CTCFP49711 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CTCFP49711 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms